Fully Automated Quantification of Cardiac Indices from Cine MRI Using a Combination of Convolution Neural Networks

• Published in: 2020 42nd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) pp. 1221 - 1224
• Main Authors: Pereira, Renato F., Rebelo, Marina S., Moreno, Ramon A., Marco, Anderson G., Lima, Daniel M., Arruda, Marcelo A. F., Krieger, Jose E., Gutierrez, Marco A.
• Format: Conference Proceeding
• Language: English
• Published: IEEE 01-07-2020
• ISSN: 1558-4615
• DOI: 10.1109/EMBC44109.2020.9176166

Cardiovascular magnetic resonance imaging (CMRI) is one of the most accurate non-invasive modalities for evaluation of cardiac function, especially the left ventricle (LV). In this modality, the manual or semi-automatic delineation of LV by experts is currently the standard clinical practice for chambers segmentation. Despite these efforts, global quantification of LV remains a challenge. In this work, a combination of two convolutional neural network (CNN) architectures for quantitative evaluation of the LV is described, which estimates the cavity and the myocardium areas, endocardial cavity dimensions in three directions, and the myocardium regional wall thickness in six radial directions. The method was validated in CMRI exams of 56 patients (LVQuan19 dataset) and evaluated by metrics Dice Index, Mean Absolute Error, and Correlation with superior performance compared to the state-of-the-art methods. The combination of the CNN architectures provided a simpler yet fully automated approach, requiring no specialist interaction.Clinical Relevance- With the proposed method, it is possible to perform automatically the full quantification of regional clinically relevant parameters of the left ventricle in short-axis CMRI images with superior performance compared to state-of-the-art methods.