Phylogeny and New Classification of Hydrothermal Vent and Seep Shrimps of the Family Alvinocarididae (Decapoda)

• Published in: PloS one Vol. 10; no. 7; p. e0129975
• Main Authors: Vereshchaka, Alexander L, Kulagin, Dmitry N, Lunina, Anastasia A
• Format: Journal Article
• Language: English
• Published: United States Public Library of Science 10-07-2015; Public Library of Science (PLoS)
• Subjects: Alpheidae; Alvinocarididae; Alvinocaris; Animals; Biogeography; Biological Evolution; Caridea; Cladistic analysis; Classification; Crustacea; Cytochrome; Cytochrome oxidase; Cytochrome-c oxidase; Data processing; Decapoda; Decapoda - anatomy & histology; Decapoda - classification; Decapoda - enzymology; Decapoda - genetics; Deoxyribonucleic acid; DNA; Electron Transport Complex IV - genetics; Genera; Genes, Mitochondrial; Hydrothermal vent ecosystems; Hydrothermal Vents - analysis; Mitochondria; Morphology; New genera; Oceans and Seas; Opaepele; Oplophoridae; Phylogenetics; Phylogeny; Shrimps; Species; Studies; Taxa
• ISSN: 1932-6203; 1932-6203
• DOI: 10.1371/journal.pone.0129975

The paper addresses the phylogeny and classification of the hydrothermal vent shrimp family Alvinocarididae. Two morphological cladistic analyses were carried out, which use all 31 recognized species of Alvinocarididae as terminal taxa. As outgroups, two species were included, both representing major caridean clades: Acanthephyra purpurea (Acanthephyridae) and Alpheus echiurophilus (Alpheidae). For additional support of the clades we utilised available data on mitochondrial Cytochrome c Oxidase I gene (CO1) and 16S ribosomal markers. Both morphological and molecular methods resulted in similar tree topologies and nearly identical clades. We consider these clades as evolutionary units and thus erect two new subfamilies: Rimicaridinae (Alvinocaridinides, Manuscaris, Opaepele, Shinkaicaris, Rimicaris), Alvinocaridinae (Alvinocaris), whilst recognising Mirocaridinae (with genera Mirocaris and Nautilocaris) at subfamily level. One genus, Keldyshicaris could not be assigned to any subfamily and is thus left as incertae sedis. The monophyly of Alvinocardinae was supported by morphological data, but not supported by molecular data (two analyses); the monophyly of all subfamilies was supported both by morphological and molecular data. Chorocaris is herein synonymized with Rimicaris, whilst Opaepele vavilovi is herein transferred to a new genus Keldyshicaris. Morphological trends within Alvinocarididae are discussed and short biogeographical remarks are given. We provide emended diagnoses for all subfamilies and genera along with keys to all recognized species.