Long noncoding RNA BS-DRL1 modulates the DNA damage response and genome stability by interacting with HMGB1 in neurons

• Published in: Nature communications Vol. 12; no. 1; pp. 4075 - 17
• Main Authors: Lou, Min-Min, Tang, Xiao-Qiang, Wang, Guang-Ming, He, Jia, Luo, Fang, Guan, Ming-Feng, Wang, Fei, Zou, Huan, Wang, Jun-Ying, Zhang, Qun, Xu, Ming-Jian, Shi, Qi-Li, Shen, Li-Bing, Ma, Guo-Ming, Wu, Yi, Zhang, Yao-Yang, Liang, Ai-bin, Wang, Ting-Hua, Xiong, Liu-Lin, Wang, Jian, Xu, Jun, Wang, Wen-Yuan
• Format: Journal Article
• Language: English
• Published: London Nature Publishing Group UK 01-07-2021; Nature Publishing Group; Nature Portfolio
• Subjects: 13; 13/1; 13/109; 13/31; 13/51; 14; 14/1; 14/19; 631/337/1427; 631/337/384/2568; 631/378/87; Alcohol Oxidoreductases - genetics; Alcohol Oxidoreductases - metabolism; Animals; Biological activity; Biological Phenomena; Brain; Brain damage; Brain injury; Central nervous system; Cerebellum; Chromatin; Chromatin remodeling; Degeneration; Deoxyribonucleic acid; Depletion; DNA; DNA Damage; Etoposide; Female; Gene Expression Regulation; Genomes; Genomic Instability; HMGB1 protein; HMGB1 Protein - genetics; HMGB1 Protein - metabolism; Humanities and Social Sciences; Male; Mice; Mice, Knockout; multidisciplinary; Mutation; Neurodegeneration; Neurons; Neurons - metabolism; RNA, Long Noncoding - genetics; RNA, Long Noncoding - metabolism; Science; Science (multidisciplinary); Stability
• ISSN: 2041-1723; 2041-1723
• DOI: 10.1038/s41467-021-24236-z

Long noncoding RNAs (lncRNAs) are known to regulate DNA damage response (DDR) and genome stability in proliferative cells. However, it remains unknown whether lncRNAs are involved in these vital biological processes in post-mitotic neurons. Here, we report and characterize a lncRNA, termed Brain Specific DNA-damage Related lncRNA1 (BS-DRL1), in the central nervous system. BS-DRL1 is a brain-specific lncRNA and depletion of BS-DRL1 in neurons leads to impaired DDR upon etoposide treatment in vitro. Mechanistically, BS-DRL1 interacts with HMGB1, a chromatin protein that is important for genome stability, and is essential for the assembly of HMGB1 on chromatin. BS-DRL1 mediated DDR exhibits cell-type specificity in the cortex and cerebellum in gamma-irradiated mice and BS-DRL1 knockout mice show impaired motor function and concomitant purkinje cell degeneration. Our study extends the understanding of lncRNAs in DDR and genome stability and implies a protective role of lncRNA against neurodegeneration.
Long noncoding RNAs (lncRNAs) are known to regulate the DNA damage response (DDR), however their role in the brain is less well studied. Here, the authors demonstrate a neuron-specific role for Brain Specific DNA-damage Related lncRNA1 (BS-DRL1) and show BS-DRL1 modulates DDR by interacting with HMGB1 in a cell-type specific manner.