Chromatin as an expansive canvas for chemical biology

• Published in: Nature chemical biology Vol. 8; no. 5; pp. 417 - 427
• Main Authors: Fierz, Beat, Muir, Tom W
• Format: Journal Article
• Language: English
• Published: New York Nature Publishing Group US 17-04-2012; Nature Publishing Group
• Subjects: 631/208/176; 631/92/458; 631/92/612/100; 631/92/96; Animals; Biochemical Engineering; Biochemistry; Biologists; Bioorganic Chemistry; Cell Biology; Cell differentiation; Chemistry; Chemistry and Materials Science; Chemistry/Food Science; Chromatin; Chromatin - chemistry; Chromatin - metabolism; Histone Deacetylases - chemistry; Histone Deacetylases - metabolism; Histone-Lysine N-Methyltransferase - chemistry; Histone-Lysine N-Methyltransferase - metabolism; Histones - chemistry; Histones - metabolism; Humans; Mice; Organismal biology; review-article; Signal transduction
• ISSN: 1552-4450; 1552-4469
• DOI: 10.1038/nchembio.938

Chromatin structure and its modulation by epigenetic mechanisms represent a complex system that regulates gene expression in cells. Chemical biology approaches, including chemical probes, designer chromatin and molecular-level analysis of chromatin states, offer powerful mechanistic tools for understanding and manipulating chromatin at all levels of cellular organization.
Chromatin is extensively chemically modified and thereby acts as a dynamic signaling platform controlling gene function. Chromatin regulation is integral to cell differentiation, lineage commitment and organism development, whereas chromatin dysregulation can lead to age-related and neurodegenerative disorders as well as cancer. Investigating chromatin biology presents a unique challenge, as the issue spans many disciplines, including cell and systems biology, biochemistry and molecular biophysics. In recent years, the application of chemical biology methods for investigating chromatin processes has gained considerable traction. Indeed, chemical biologists now have at their disposal powerful chemical tools that allow chromatin biology to be scrutinized at the level of the cell all the way down to the single chromatin fiber. Here we present recent examples of how this rapidly expanding palette of chemical tools is being used to paint a detailed picture of chromatin function in organism development and disease.