Targeted gene correction of α1-antitrypsin deficiency in induced pluripotent stem cells

Fixing the genes in iPS cells Before human induced pluripotent stem (iPS) cells can be used to treat genetically inherited human disease, it will be necessary to develop methods of correcting disease-causing mutations that are compatible with clinical applications, combining efficiency with efficacy...

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Published in:Nature (London) Vol. 478; no. 7369; pp. 391 - 394
Main Authors: Yusa, Kosuke, Rashid, S. Tamir, Strick-Marchand, Helene, Varela, Ignacio, Liu, Pei-Qi, Paschon, David E., Miranda, Elena, Ordóñez, Adriana, Hannan, Nicholas R. F., Rouhani, Foad J., Darche, Sylvie, Alexander, Graeme, Marciniak, Stefan J., Fusaki, Noemi, Hasegawa, Mamoru, Holmes, Michael C., Di Santo, James P., Lomas, David A., Bradley, Allan, Vallier, Ludovic
Format: Journal Article
Language:English
Published: London Nature Publishing Group UK 20-10-2011
Nature Publishing Group
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Summary:Fixing the genes in iPS cells Before human induced pluripotent stem (iPS) cells can be used to treat genetically inherited human disease, it will be necessary to develop methods of correcting disease-causing mutations that are compatible with clinical applications, combining efficiency with efficacy and leaving no residual sequences in the targeted genome. Yusa et al . present a proof-of-principle experiment demonstrating the complete genetic correction of a disease-causing mutation in patient-specific iPS cells. They use zinc finger nucleases and piggyBac technology to correction a point mutation in the α 1 -antitrypsin gene, which is responsible for α 1 -antitrypsin deficiency (A1ATD). The corrected iPS cells could efficiently differentiate to form hepatocyte-like cells and engraft into an animal model for liver injury without tumour formation. Human induced pluripotent stem cells (iPSCs) represent a unique opportunity for regenerative medicine because they offer the prospect of generating unlimited quantities of cells for autologous transplantation, with potential application in treatments for a broad range of disorders 1 , 2 , 3 , 4 . However, the use of human iPSCs in the context of genetically inherited human disease will require the correction of disease-causing mutations in a manner that is fully compatible with clinical applications 3 , 5 . The methods currently available, such as homologous recombination, lack the necessary efficiency and also leave residual sequences in the targeted genome 6 . Therefore, the development of new approaches to edit the mammalian genome is a prerequisite to delivering the clinical promise of human iPSCs. Here we show that a combination of zinc finger nucleases (ZFNs) 7 and piggyBac 8 , 9 technology in human iPSCs can achieve biallelic correction of a point mutation (Glu342Lys) in the α 1 -antitrypsin ( A1AT , also known as SERPINA1 ) gene that is responsible for α 1 -antitrypsin deficiency. Genetic correction of human iPSCs restored the structure and function of A1AT in subsequently derived liver cells in vitro and in vivo . This approach is significantly more efficient than any other gene-targeting technology that is currently available and crucially prevents contamination of the host genome with residual non-human sequences. Our results provide the first proof of principle, to our knowledge, for the potential of combining human iPSCs with genetic correction to generate clinically relevant cells for autologous cell-based therapies.
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Author Contributions K.Y. and S.T.R. are joint first authors. D.A.L., A.B. and L.V. contributed equally to this work. K.Y., S.T.R. D.A.L. A.B. and L.V. conceived of the research and wrote the manuscript with comments from all authors. K.Y. performed gene correction in mouse and human IPSCs and conducted all experiments using piggyBac in Cambridge, UK. S.T.R., E.M., A.O., N.H., F.R., G.A. and S.J.M. performed in vitro phenotypic analysis of corrected hIPSCs. S.T.R., H.S.M., S.D. and J.S. performed in vivo work. I.V. performed data analysis of exome sequencing. P.L., D.E.P. and M.C.H. generated and validated ZFNs. N.F. and M.H. generated Sendaivirus vectors.
These authors contributed equally to this work.
ISSN:0028-0836
1476-4687
DOI:10.1038/nature10424