Combinatorial treatment rescues tumour-microenvironment-mediated attenuation of MALT1 inhibitors in B-cell lymphomas

Activated B-cell-like diffuse large B-cell lymphomas (ABC-DLBCLs) are characterized by constitutive activation of nuclear factor κB driven by the B-cell receptor (BCR) and Toll-like receptor (TLR) pathways. However, BCR-pathway-targeted therapies have limited impact on DLBCLs. Here we used >1,100...

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Published in:Nature materials Vol. 22; no. 4; pp. 511 - 523
Main Authors: Shah, Shivem B., Carlson, Christopher R., Lai, Kristine, Zhong, Zhe, Marsico, Grazia, Lee, Katherine M., Félix Vélez, Nicole E., Abeles, Elisabeth B., Allam, Mayar, Hu, Thomas, Walter, Lauren D., Martin, Karen E., Gandhi, Khanjan, Butler, Scott D., Puri, Rishi, McCleary-Wheeler, Angela L., Tam, Wayne, Elemento, Olivier, Takata, Katsuyoshi, Steidl, Christian, Scott, David W., Fontan, Lorena, Ueno, Hideki, Cosgrove, Benjamin D., Inghirami, Giorgio, García, Andrés J., Coskun, Ahmet F., Koff, Jean L., Melnick, Ari, Singh, Ankur
Format: Journal Article
Language:English
Published: London Nature Publishing Group UK 01-04-2023
Nature Publishing Group
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Summary:Activated B-cell-like diffuse large B-cell lymphomas (ABC-DLBCLs) are characterized by constitutive activation of nuclear factor κB driven by the B-cell receptor (BCR) and Toll-like receptor (TLR) pathways. However, BCR-pathway-targeted therapies have limited impact on DLBCLs. Here we used >1,100 DLBCL patient samples to determine immune and extracellular matrix cues in the lymphoid tumour microenvironment (Ly-TME) and built representative synthetic-hydrogel-based B-cell-lymphoma organoids accordingly. We demonstrate that Ly-TME cellular and biophysical factors amplify the BCR–MYD88–TLR9 multiprotein supercomplex and induce cooperative signalling pathways in ABC-DLBCL cells, which reduce the efficacy of compounds targeting the BCR pathway members Bruton tyrosine kinase and mucosa-associated lymphoid tissue lymphoma translocation protein 1 (MALT1). Combinatorial inhibition of multiple aberrant signalling pathways induced higher antitumour efficacy in lymphoid organoids and implanted ABC-DLBCL patient tumours in vivo. Our studies define the complex crosstalk between malignant ABC-DLBCL cells and Ly-TME, and provide rational combinatorial therapies that rescue Ly-TME-mediated attenuation of treatment response to MALT1 inhibitors. A hydrogel-based modular lymphoma organoid identifies how lymphoid microenvironment cues dampen the effect of MALT1 inhibitors and informs effective combination therapies to rescue the treatment response
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S.B.S. and A.S. designed the research. S.B.S., C.C., Z.Z., K.L., G.M., K.M.L., N.E.F.V. and E.B.A. assisted with organoid experiments and data collection, along with data analysis. G.I. and A.L.M-W. provided human and canine PDX specimens, respectively, and W.T provided biopsy tumour microarrays. S.D.B. and R.P. performed canine and human PDX xenograft implantation and treatment of mice with implanted human PDXs. K.T., D.W.S., K.T. and C.S. provided sample analysis of the BC cohort. K.G. and J.L.K. analysed the HMRC cohort. L.D.W. and B.D.C. performed RNA sequencing analysis on organoids. M.A., T.H. and A.C. performed and analysed cyclic immunofluorescence studies. K.E.M. and A.J.G. performed rheology experiments and analysis. H.U., L.F., O.E., J.L.K. and A.M. provided critical reagents and/or intellectual input. The manuscript was written by S.B.S. and A.S., revised by A.S., and all authors provided comments.
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ISSN:1476-1122
1476-4660
DOI:10.1038/s41563-023-01495-3