Genotype Selection for Grain Yield of Sorghum through Generalized Linear Mixed Model

• Published in: Agronomy (Basel) Vol. 13; no. 3; p. 852
• Main Authors: Tesfa, Mulugeta, Zewotir, Temesgen, Derese, Solomon Assefa, Belay, Denekew Bitew, Laing, Mark
• Format: Journal Article
• Language: English
• Published: Basel MDPI AG 01-03-2023
• Subjects: Agricultural production; Analysis; Crop yield; Data analysis; Design; Expected values; Experiments; general linear mixed model; Genotype & phenotype; genotype performance; Genotypes; Information management; Lattice design; Mass production; Maximum likelihood estimates; non-normality; Phenotypes; Plant breeding; Principal components analysis; Probability distribution functions; random effect; Sorghum; Statistical models; Variables; Variance analysis; Ethiopia
• ISSN: 2073-4395; 2073-4395
• DOI: 10.3390/agronomy13030852

The classical model only provides a correct analysis if all the effects are fixed. For experiments that include fixed and random effects, the general linear mixed model is appropriate for handling the non-normal distributed response variables. The aim of this study is to perform the genotype selection through a generalized linear mixed model and identify the impact of treatment and the related traits on grain yield. The data were collected using a lattice square design and measured the phenotype traits of sorghum. The result of PCA was used as an input variable for the general linear mixed model. The data analysis was performed using a general linear mixed model with maximum likelihood methods to estimate the parameters of the model. The result showed that the grain yield had a gamma distribution and a treatment effect on grain yield. The first principal component was significant for grain yield. The variability of grain yield due to the random effects of replication within treatment, genotype, and the interaction of genotype by treatment were significant. The best genotypes effective for the mass production of sorghum were G137, G66 and G156 under stress conditions and G55, G41 and G78 under irrigated conditions. Overall, genotype selection using a general linear mixed model for grain yield is recommended for genotype selection of plant breeding.