Kinetics of myosin node aggregation into a contractile ring
We study a stochastic aggregation model for the assembly of the contractile ring from a broad band of nodes during cytokinesis in fission yeast. We found that bands of nodes condense into rings when the range of node interactions is larger than the width of the band. Wide bands are unstable to clump...
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Published in: | Physical review letters Vol. 105; no. 4; p. 048102 |
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20-07-2010
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Abstract | We study a stochastic aggregation model for the assembly of the contractile ring from a broad band of nodes during cytokinesis in fission yeast. We found that bands of nodes condense into rings when the range of node interactions is larger than the width of the band. Wide bands are unstable to clump formation due to Poisson density fluctuations. We derive expressions for node kinetics and times for ring vs clump formation and test them using numerical simulations. These results suggest clump formation mechanisms in mutant cells. |
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AbstractList | We study a stochastic aggregation model for the assembly of the contractile ring from a broad band of nodes during cytokinesis in fission yeast. We found that bands of nodes condense into rings when the range of node interactions is larger than the width of the band. Wide bands are unstable to clump formation due to Poisson density fluctuations. We derive expressions for node kinetics and times for ring vs clump formation and test them using numerical simulations. These results suggest clump formation mechanisms in mutant cells. |
ArticleNumber | 048102 |
Author | Vavylonis, Dimitrios Ojkic, Nikola |
Author_xml | – sequence: 1 givenname: Nikola surname: Ojkic fullname: Ojkic, Nikola organization: Department of Physics, Lehigh University, Bethlehem, Pennsylvania 18015, USA – sequence: 2 givenname: Dimitrios surname: Vavylonis fullname: Vavylonis, Dimitrios |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/20867886$$D View this record in MEDLINE/PubMed |
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Cites_doi | 10.1088/1367-2630/9/11/421 10.1091/mbc.E09-05-0428 10.1126/science.1113230 10.1016/j.jmb.2007.09.066 10.1529/biophysj.107.111351 10.1101/gad.1697208 10.1039/b808580c 10.1083/jcb.200806151 10.1073/pnas.0409021102 10.2976/1.3385659 10.1103/PhysRevLett.95.258103 10.1103/PhysRevLett.103.058102 10.1103/PhysRevLett.92.078101 10.1126/science.1151086 10.1103/PhysRevLett.90.118301 10.1371/journal.pcbi.0030078 10.1242/jcs.115.5.887 10.1103/PhysRevLett.90.138102 10.1073/pnas.0903974106 10.1083/jcb.200602032 10.1063/1.443328 |
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References | 19667200 - Proc Natl Acad Sci U S A. 2009 Sep 8;106(36):15192-7 19864459 - Mol Biol Cell. 2009 Dec;20(24):5195-210 19075108 - J Cell Biol. 2008 Dec 15;183(6):979-88 19056897 - Genes Dev. 2008 Nov 15;22(22):3205-16 12689327 - Phys Rev Lett. 2003 Apr 4;90(13):138102 16224022 - Science. 2005 Oct 14;310(5746):310-4 18079366 - Science. 2008 Jan 4;319(5859):97-100 16864655 - J Cell Biol. 2006 Jul 31;174(3):391-402 17981905 - Biophys J. 2008 Feb 15;94(4):1155-68 14995891 - Phys Rev Lett. 2004 Feb 20;92(7):078101 15928091 - Proc Natl Acad Sci U S A. 2005 Jun 7;102(23):8228-32 19792537 - Phys Rev Lett. 2009 Jul 31;103(5):058102 12688971 - Phys Rev Lett. 2003 Mar 21;90(11):118301 18021803 - J Mol Biol. 2008 Jan 11;375(2):325-30 16384514 - Phys Rev Lett. 2005 Dec 16;95(25):258103 11870208 - J Cell Sci. 2002 Mar 1;115(Pt 5):887-98 17465676 - PLoS Comput Biol. 2007 Apr 27;3(4):e78 21119765 - HFSP J. 2010 Jun;4(3-4):122-30 PhysRevLett.105.048102Cc1R1 PhysRevLett.105.048102Cc10R1 PhysRevLett.105.048102Cc3R1 PhysRevLett.105.048102Cc12R1 PhysRevLett.105.048102Cc20R1 PhysRevLett.105.048102Cc2R1 PhysRevLett.105.048102Cc21R1 PhysRevLett.105.048102Cc14R1 PhysRevLett.105.048102Cc13R1 PhysRevLett.105.048102Cc16R1 PhysRevLett.105.048102Cc15R1 PhysRevLett.105.048102Cc9R1 PhysRevLett.105.048102Cc8R1 PhysRevLett.105.048102Cc5R1 PhysRevLett.105.048102Cc4R1 PhysRevLett.105.048102Cc7R1 PhysRevLett.105.048102Cc6R1 R. Arai (PhysRevLett.105.048102Cc11R1) 2002; 115 PhysRevLett.105.048102Cc18R1 PhysRevLett.105.048102Cc17R1 PhysRevLett.105.048102Cc19R1 |
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SubjectTerms | Computer Simulation Cytokinesis Kinetics Monte Carlo Method Myosins - metabolism Schizosaccharomyces - cytology Schizosaccharomyces - metabolism |
Title | Kinetics of myosin node aggregation into a contractile ring |
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