Landscape genetic structure of natural populations of Acacia caven in Argentina

• Published in: Tree genetics & genomes Vol. 8; no. 4; pp. 911 - 924
• Main Authors: Pometti, Carolina L, Bessega, Cecilia F, Vilardi, Juan C, Saidman, Beatriz O
• Format: Journal Article
• Language: English
• Published: Berlin/Heidelberg Springer-Verlag 01-08-2012; Springer Nature B.V
• Subjects: Acacia caven; Adaptability; Amplified fragment length polymorphism; Anthropogenic factors; Biomedical and Life Sciences; Biotechnology; Climate; Differentiation; Environmental impact; Forestry; Genetic diversity; genetic markers; Genetic structure; genetic variation; Genomes; Landscape; Life Sciences; loci; Morphology; Natural populations; Original Paper; Plant Breeding/Biotechnology; Plant Genetics and Genomics; Polymorphism; Population genetics; Population studies; Positive selection; Sampling; Species diversity; Tree Biology; Trees; variance; Argentina; Eco-regions; Genetic structure; Natural populations; Varieties; AFLP
• ISSN: 1614-2942; 1614-2950
• DOI: 10.1007/s11295-012-0479-6

Acacia caven is a South American species which shows remarkable climate tolerance and ecological adaptability; as such, this species is suitable for colonizing anthropogenically degraded sites. This species is widely distributed, and six varieties have been described based on both morphological traits and molecular markers. Moreover, Aronson (1992) suggests that, for this species, geographical separation could be associated with ecological differentiation. In this study, amplified fragment length polymorphisms were used to study genetic variation within and among 15 populations of A. caven from five eco-regions of Argentina and to investigate (1) whether the varieties are genetically coherent, (2) whether the varieties correspond consistently to a single eco-region, (3) the proportion of the species diversity explained within and among varieties and eco-regions. Eight of the 225 bands appear to be under positive selection. The remaining 217 neutral loci showed a high percentage of polymorphism (99.1%). The estimates of genetic diversity H j were generally high. The F ST (0.315) was highly significant, providing evidence for genetic structure among populations. Hierarchical analysis of molecular variance indicated that variation among eco-regions was 8.2% and highly significant. The higher component of variance was found within populations (67.5%). STRUCTURE analysis suggested that the optimal number of K = 11. The results showed that, in most cases, geographic separation is associated with ecological differentiation. Since differentiation of A. caven populations studied here in eco-regions was highly significant, sampling should include a large number of trees within populations as well as covering the wide ecological diversity of the species.