Sulfate treatment affects desulfonating bacterial community structures in Agrostis rhizospheres as revealed by functional gene analysis based on asfA

• Published in: European journal of soil biology Vol. 46; no. 3; pp. 248 - 254
• Main Authors: Schmalenberger, A., Telford, A., Kertesz, M.A.
• Format: Journal Article
• Language: English
• Published: Paris Elsevier Masson SAS 01-05-2010; Elsevier
• Subjects: Agronomy. Soil science and plant productions; Agrostis rhizosphere; AsfA; Biochemistry and biology; Biological and medical sciences; Chemical, physicochemical, biochemical and biological properties; Desulfonation; DGGE; Fundamental and applied biological sciences. Psychology; Physics, chemistry, biochemistry and biology of agricultural and forest soils; Soil science; T-RFLP; AsfA; Agrostis rhizosphere; Desulfonation; T-RFLP; DGGE; Community structure; Monocotyledones; Agrostis; Denaturing gradient gel electrophoresis; Functional analysis; Sulfates; Rhizosphere; Restriction fragment length polymorphism; Gene; Gramineae; Angiospermae; Bacteria; Herbaceous plant; Spermatophyta; Soil science; Microbial community
• ISSN: 1164-5563
• DOI: 10.1016/j.ejsobi.2010.03.003

Sulfonates are major soil sulfur components that can be desulfurized by certain soil-borne bacteria as a sulfur source, but application of sulfate through fertilization could affect this natural sulfur mobilizing process. This study investigates the effects of sulfate treatments on bacterial communities in semi-natural grasslands.
Agrostis stolonifera-dominated turfs with their autochthonous bacteria from Woburn Experimental Farm, UK, were incubated with and without additional sulfate over a period of eight weeks and compared to soil and rhizosphere samples taken from the field directly. Cultivable rhizobacteria able to desulfurize toluenesulfonate were dominated by strains affiliated to the
Variovorax,
Polaromonas and
Rhodococcus genera. The betaproteobacteria communities (16S rRNA gene-based denaturing gradient gel electrophoresis) and the desulfonating bacterial communities (
asfA based terminal restriction fragment length polymorphism) revealed clear differences between field rhizospheres and bulk soil and the two types of incubated rhizospheres. Clone libraries of
asfA from the sulfate-limited treatment were dominated by a new AsfA type, affiliated to
Polaromonas. The results from this study suggest that the community of desulfonating bacteria in the
Agrostis rhizosphere adapts quickly to changing levels of inorganic sulfate.