Some new reaction pathways for the formation of cytosine in interstellar space – A quantum chemical study

• Published in: Advances in space research Vol. 51; no. 5; pp. 797 - 811
• Main Authors: Gupta, V.P., Tandon, Poonam, Mishra, Priti
• Format: Journal Article
• Language: English
• Published: Elsevier Ltd 01-03-2013
• Subjects: Chemical reactivity; Cytosine; Density functional theory; Interstellar space; QTAIM; Reaction mechanism; Reaction mechanism; Density functional theory; Cytosine; Chemical reactivity; QTAIM; Interstellar space
• ISSN: 0273-1177; 1879-1948
• DOI: 10.1016/j.asr.2012.10.005

► DFT techniques to explore the possibility of cytosine formation in interstellar space. ► Propynylidyne and cyanoacetylene are major sources of cytosine formation in gas and grains. ► Exothermic reactions with maximum barrier of 12.5kcal/mol. ► Global and local descriptors and QTAIM to understand mechanistic aspects of chemical reaction. ► Reactions with cyanoacetylene more probable to occur in the cold interstellar clouds.
The detection of nucleic acid bases in carbonaceous meteorites suggests that their formation and survival is possible outside of the Earth. Small N-heterocycles, including pyrimidine, purines and nucleobases, have been extensively sought in the interstellar medium. It has been suggested theoretically that reactions between some interstellar molecules may lead to the formation of cytosine, uracil and thymine though these processes involve significantly high potential barriers. We attempted therefore to use quantum chemical techniques to explore if cytosine can possibly form in the interstellar space by radical–radical and radical-molecule interaction schemes, both in the gas phase and in the grains, through barrier-less or low barrier pathways. Results of DFT calculations for the formation of cytosine starting from some of the simple molecules and radicals detected in the interstellar space are being reported. Global and local descriptors such as molecular hardness, softness and electrophilicity, and condensed Fukui functions and local philicity indices were used to understand the mechanistic aspects of chemical reaction. The presence and nature of weak bonds in the molecules and transition states formed during the reaction process have been ascertained using Bader’s quantum theory of atoms in molecules (QTAIMs). Two exothermic reaction pathways starting from propynylidyne (CCCH) and cyanoacetylene (HCCCN), respectively, have been identified. While the first reaction path is found to be totally exothermic, it involves a barrier of 12.5kcal/mol in the gas phase against the lowest value of about 32kcal/mol reported in the literature. The second path is both exothermic and barrier-less. The later has, therefore, a greater probability of occurrence in the cold interstellar clouds (10–50K).