Complete chloroplast genome of Rorippa apetala Y.Y. Kim & B.U. Oh (Brassicales: Brassicaceae), a species endemic to the Korean Peninsula

• Published in: Journal of Asia-Pacific biodiversity Vol. 17; no. 1; pp. 196 - 199
• Main Authors: Ha, Young-Ho, Choi, Ye-Rim, Cho, Ara, Kim, Tae-Hee, Kim, Young-Soo, Kim, Sang-Chul, Kim, Hyuk-Jin
• Format: Journal Article
• Language: English
• Published: Elsevier B.V 01-03-2024; 국립중앙과학관
• Subjects: Brassicaceae; chloroplast genome; endemic species; Rorippa apetala; 생물학; Rorippa apetala; Brassicaceae; chloroplast genome; endemic species
• ISSN: 2287-884X; 2287-9544
• DOI: 10.1016/j.japb.2023.10.007

Here, we successfully assembled the complete chloroplast genome of Rorippa apetala Y.Y. Kim & B.U. Oh, a species endemic to the Korean Peninsula. The chloroplast genome was 154,818 bp long and exhibited a typical quadripartite structure comprising large single-copy (83,847 bp) and small single-copy (18,023 bp) regions, and a pair of inverted repeats (26,474 bp each). A total of 129 genes were encoded, including 84 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on the concatenated sequences of 78 protein-coding genes from 25 species revealed a close relationship between R. apetala and Rorippa indica (L.) Hiern, supported by full bootstrap value (100). Future studies employing more informative markers and a broader range of taxa will provide valuable insights into the biogeographical distribution of the genus Rorippa and offer a deeper understanding of the speciation process in R. apetala.