Ordinary stoichiometry of extraordinary microorganisms
All life on Earth seems to be made of the same chemical elements in relatively conserved proportions (stoichiometry). Whether this stoichiometry is conserved in settings that differ radically in physicochemical conditions (extreme environments) from those commonly encountered elsewhere on the planet...
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Published in: | Geobiology Vol. 14; no. 1; pp. 33 - 53 |
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Main Authors: | , , , |
Format: | Journal Article |
Language: | English |
Published: |
England
Blackwell Publishing Ltd
01-01-2016
Wiley Subscription Services, Inc |
Subjects: | |
Online Access: | Get full text |
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Summary: | All life on Earth seems to be made of the same chemical elements in relatively conserved proportions (stoichiometry). Whether this stoichiometry is conserved in settings that differ radically in physicochemical conditions (extreme environments) from those commonly encountered elsewhere on the planet provides insight into possible stoichiometries for putative life beyond Earth. Here, we report measurements of elemental stoichiometry for extremophile microbes from hot springs of Yellowstone National Park (YNP). Phototrophic and chemotrophic microbes were collected in locations spanning large ranges of temperature (24 °C to boiling), pH (1.6–9.6), redox (0.1–7.2 mg L−1 dissolved oxygen), and nutrient concentrations (0.01–0.25 mg L−1 NO2− , 0.7–12.9 mg L−1 NO3− , 0.01–42 mg L−1 NH4+, 0.003–1.1 mg L−1 P mostly as phosphate). Despite these extreme conditions, the microbial cells sampled had a major and trace element stoichiometry within the ranges commonly encountered for microbes living in the more moderate environments of lakes and surface oceans. The cells did have somewhat high C:P and N:P ratios that are consistent with phosphorus (P) limitation. Furthermore, chemotrophs and phototrophs had similar compositions with the exception of Mo content, which was enriched in cells derived from chemotrophic sites. Thus, despite the extraordinary physicochemical and biological diversity of YNP environments, life in these settings, in a stoichiometric sense, remains much the same as we know it elsewhere. |
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Bibliography: | NASA Astrobiology Institute - No. NAI5-0018 ark:/67375/WNG-KS71KMZ5-0 National Science Foundation - No. DEB-0950175 ArticleID:GBI12153 Fig. S1. Example micrographs of separated samples from two YNP hot springs: (A) 'Bison Pool', which fell just below the 20% C cutoff (see text) and was not part of this study but was collected and separated as described in the Methods section; (B) 'Green Cheese' (sample 090802W1). Fig. S2. Elemental makeup of separated and unseparated samples shown on a ternary diagram. Fig. S3. Metal:C ratios (molar) for Ni (A, E), Cu (B, F), Zn (C, G), and Mo (D, H) in separated cells show no correlation with either temperature or pH (coefficient of determination R2 < 0.1 on least-squares linear regressions; for each panel tests were done with phototrophs and chemotrophs together). Fig. S4. Mo:C ratios (molar) in separated cells show no correlation with hot spring dissolved nitrite (A), nitrate (B), ammonium (C), or sulfide (D) (see text). Fig. S5. (A) Measured molar Mo:P ratios in the separated cells and bulk sediment. (B) Measured molar Mo:P ratios in the separated cells and hot spring fluid. Fig. S6. CCA triplots scaled for OTU optima constrained by cellular C, N, and P (panel A) or metal (panel B) contents. Table S1. Major chemical composition of the hot springs sampled, as well as dissolved P and Mo content. Table S2. Cell separation recovery yields for four hot spring sediment samples, three of which (090724Q1, 090804LA, and 090801K1) were not part of this study but were collected and separated as described in the Methods section. Table S3. Elemental composition of cell communities separated from sediment sampled at the hot springs listed in Table and Table S1. Table S4. Physicochemical parameters for laboratory cultures and environments for which the extended elemental composition of biomass (obtained by the technique reported in the 'biomass analysis' column) was reported in the literature cited in the main text. istex:2D52BF5557FC5D050E60A41157FD15CCC2D47DBD ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
ISSN: | 1472-4677 1472-4669 |
DOI: | 10.1111/gbi.12153 |