Emergence of Plasmid-Mediated Resistance Genes tet (X) and mcr-1 in Escherichia coli Clinical Isolates from Pakistan

• Published in: mSphere Vol. 6; no. 4; p. e0069521
• Main Authors: Li, Ruichao, Mohsin, Mashkoor, Lu, Xiaoyu, Abdullah, Sabahat, Munir, Asim, Wang, Zhiqiang
• Format: Journal Article
• Language: English
• Published: United States American Society for Microbiology 25-08-2021
• Subjects: Anti-Bacterial Agents - pharmacology; Antimicrobial Chemotherapy; beta-Lactamases - genetics; Drug Resistance, Bacterial - genetics; Escherichia coli - drug effects; Escherichia coli - enzymology; Escherichia coli - genetics; Escherichia coli Infections - microbiology; Escherichia coli Proteins - genetics; Humans; Microbial Sensitivity Tests; Observation; Pakistan; Plasmids - genetics; Pakistan; tet(X); clinical settings; plasmids; Escherichia coli; mcr-1
• ISSN: 2379-5042; 2379-5042
• DOI: 10.1128/mSphere.00695-21

The emergence of
(X) represents a significant threat to human health. In this study, we aimed to investigate the genomic characterizations of
(X)-positive clinical Escherichia coli isolates and provide genomic insight into the dissemination of antibiotic-resistant bacteria in clinical settings. Four
(X)-positive E. coli isolates, PK5074, PK5086, PK5095, and PK5097, from 100 human clinical isolates were identified by PCR and were resistant to tigecycline.
(X) genes were in IncFII plasmids in 4 E. coli isolates. Worryingly, PK5074 also carried an
-bearing IncHI2 plasmid. Notably, a relatively high cotransfer frequency of
(X) and
in PK5074 was found. PK5086, PK5095, and PK5097 were categorized into sequence type 410 (ST410) and indicated clonal dissemination of
(X)-positive strains in hospitals, but
(X)-bearing plasmids in PK5086, PK5095, and PK5097 were nontransferable. We present the first report of clinical E. coli isolates harboring
(X) in South Asia. Our results support the implication of humans as a potential reservoir for
(X)-harboring E. coli. We provide insight into the dissemination of
(X) and
in a clinical setting and highlight the current transmission of both critical resistance genes globally.
Global transmission of plasmid-mediated tigecycline resistance gene
(X)-bearing Escherichia coli strains incurs a public health concern. However, the research focusing on the prevalence of
(X)-positive isolates in clinical specimens is still rare, and to our knowledge, there is no such report from South Asia. Here, we characterized four E. coli clinical isolates harboring
(X) of human origin in Pakistan and demonstrated clonal dissemination of
(X)-positive isolates in hospitals. We report the emergence of an
-bearing IncHI2 plasmid together with a
(X)-positive IncFII plasmid in one clinical isolate. Cotransfer of
(X)- and
carrying plasmids is worrying and warrants further investigations.