CASE-DFT Structure Elucidation of Proton-Deficient Chlorodepsidones from the Indonesian Lichen Teloschistes flavicans and Structure Revision of Flavicansone

• Published in: Journal of natural products (Washington, D.C.) Vol. 87; no. 9; pp. 2148 - 2159
• Main Authors: Ferron, Solenn, Ismed, Friardi, Elyashberg, Mikhail E., Buevich, Alexei V., Arifa, Nurwahidatul, Boustie, Joël, Uriac, Philippe, Le Pogam, Pierre, Le Dévéhat, Françoise
• Format: Journal Article
• Language: English
• Published: United States American Chemical Society and American Society of Pharmacognosy 27-09-2024; American Chemical Society
• Subjects: Chemical Sciences; Nuclear magnetic resonance spectroscopy; Molecular structure; Aromatic compounds; Structure elucidation; Chemical structure
• ISSN: 0163-3864; 1520-6025; 1520-6025
• DOI: 10.1021/acs.jnatprod.4c00277

Biodiscovery efforts in Indonesia have aimed to explore the understudied chemical diversity of its rich lichen flora, seeking to find new products endowed with significant biological properties. The chemical screening of a Teloschistes flavicans extract led to selection of this species for further investigation. LC/MS and 1H NMR-based dereplication pinpointed six chlorodepsidones from the thallus of a sample of this lichen. This led to the streamlined isolation and the subsequent structure elucidation of the three new compounds norflavicansone 1, flavicansone 2, and isocaloploicin 3, along with the known chlorodepsidones 4–6, stictic acid 7, aurantiamide acetate 8, and parietin 9. The challenging structure elucidation of these proton-deficient metabolites benefited from a state-of-the-art workflow involving a synergistic combination of Computer-Assisted Structure Elucidation (CASE) and Density Functional Theory (DFT) calculations of the top-ranked candidates. This investigation also led to the revision of flavicansone’s structure, previously described from this species. The three new molecules that are being reported here are remarkable in that they represent hybrid depsidones in which one of the aromatic rings is derived from orsellinic acid and the other is derived from β-orcinol, a rare structural feature for lichen depsidones.