A Comprehensive Analysis of Choroideremia: From Genetic Characterization to Clinical Practice

Choroideremia (CHM) is a rare X-linked disease leading to progressive retinal degeneration resulting in blindness. The disorder is caused by mutations in the CHM gene encoding REP-1 protein, an essential component of the Rab geranylgeranyltransferase (GGTase) complex. In the present study, we evalua...

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Published in:PloS one Vol. 11; no. 4; p. e0151943
Main Authors: Sanchez-Alcudia, Rocio, Garcia-Hoyos, Maria, Lopez-Martinez, Miguel Angel, Sanchez-Bolivar, Noelia, Zurita, Olga, Gimenez, Ascension, Villaverde, Cristina, Rodrigues-Jacy da Silva, Luciana, Corton, Marta, Perez-Carro, Raquel, Torriano, Simona, Kalatzis, Vasiliki, Rivolta, Carlo, Avila-Fernandez, Almudena, Lorda, Isabel, Trujillo-Tiebas, Maria J, Garcia-Sandoval, Blanca, Lopez-Molina, Maria Isabel, Blanco-Kelly, Fiona, Riveiro-Alvarez, Rosa, Ayuso, Carmen
Format: Journal Article
Language:English
Published: United States Public Library of Science 12-04-2016
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Abstract Choroideremia (CHM) is a rare X-linked disease leading to progressive retinal degeneration resulting in blindness. The disorder is caused by mutations in the CHM gene encoding REP-1 protein, an essential component of the Rab geranylgeranyltransferase (GGTase) complex. In the present study, we evaluated a multi-technique analysis algorithm to describe the mutational spectrum identified in a large cohort of cases and further correlate CHM variants with phenotypic characteristics and biochemical defects of choroideremia patients. Molecular genetic testing led to the characterization of 36 out of 45 unrelated CHM families (80%), allowing the clinical reclassification of four CHM families. Haplotype reconstruction showed independent origins for the recurrent p.Arg293* and p.Lys178Argfs*5 mutations, suggesting the presence of hotspots in CHM, as well as the identification of two different unrelated events involving exon 9 deletion. No certain genotype-phenotype correlation could be established. Furthermore, all the patients´ fibroblasts analyzed presented significantly increased levels of unprenylated Rabs proteins compared to control cells; however, this was not related to the genotype. This research demonstrates the major potential of the algorithm proposed for diagnosis. Our data enhance the importance of establish a differential diagnosis with other retinal dystrophies, supporting the idea of an underestimated prevalence of choroideremia. Moreover, they suggested that the severity of the disorder cannot be exclusively explained by the genotype.
AbstractList Choroideremia (CHM) is a rare X-linked disease leading to progressive retinal degeneration resulting in blindness. The disorder is caused by mutations in the CHM gene encoding REP-1 protein, an essential component of the Rab geranylgeranyltransferase (GGTase) complex. In the present study, we evaluated a multi-technique analysis algorithm to describe the mutational spectrum identified in a large cohort of cases and further correlate CHM variants with phenotypic characteristics and biochemical defects of choroideremia patients. Molecular genetic testing led to the characterization of 36 out of 45 unrelated CHM families (80%), allowing the clinical reclassification of four CHM families. Haplotype reconstruction showed independent origins for the recurrent p.Arg293* and p.Lys178Argfs*5 mutations, suggesting the presence of hotspots in CHM, as well as the identification of two different unrelated events involving exon 9 deletion. No certain genotype-phenotype correlation could be established. Furthermore, all the patients´ fibroblasts analyzed presented significantly increased levels of unprenylated Rabs proteins compared to control cells; however, this was not related to the genotype. This research demonstrates the major potential of the algorithm proposed for diagnosis. Our data enhance the importance of establish a differential diagnosis with other retinal dystrophies, supporting the idea of an underestimated prevalence of choroideremia. Moreover, they suggested that the severity of the disorder cannot be exclusively explained by the genotype.
Choroideremia (CHM) is a rare X-linked disease leading to progressive retinal degeneration resulting in blindness. The disorder is caused by mutations in the CHM gene encoding REP-1 protein, an essential component of the Rab geranylgeranyltransferase (GGTase) complex. In the present study, we evaluated a multi-technique analysis algorithm to describe the mutational spectrum identified in a large cohort of cases and further correlate CHM variants with phenotypic characteristics and biochemical defects of choroideremia patients. Molecular genetic testing led to the characterization of 36 out of 45 unrelated CHM families (80%), allowing the clinical reclassification of four CHM families. Haplotype reconstruction showed independent origins for the recurrent p.Arg293* and p.Lys178Argfs*5 mutations, suggesting the presence of hotspots in CHM, as well as the identification of two different unrelated events involving exon 9 deletion. No certain genotype-phenotype correlation could be established. Furthermore, all the patients' fibroblasts analyzed presented significantly increased levels of unprenylated Rabs proteins compared to control cells; however, this was not related to the genotype. This research demonstrates the major potential of the algorithm proposed for diagnosis. Our data enhance the importance of establish a differential diagnosis with other retinal dystrophies, supporting the idea of an underestimated prevalence of choroideremia. Moreover, they suggested that the severity of the disorder cannot be exclusively explained by the genotype.
Choroideremia (CHM) is a rare X-linked disease leading to progressive retinal degeneration resulting in blindness. The disorder is caused by mutations in the CHM gene encoding REP-1 protein, an essential component of the Rab geranylgeranyltransferase (GGTase) complex. In the present study, we evaluated a multi-technique analysis algorithm to describe the mutational spectrum identified in a large cohort of cases and further correlate CHM variants with phenotypic characteristics and biochemical defects of choroideremia patients. Molecular genetic testing led to the characterization of 36 out of 45 unrelated CHM families (80%), allowing the clinical reclassification of four CHM families. Haplotype reconstruction showed independent origins for the recurrent p.Arg293* and p.Lys178Argfs*5 mutations, suggesting the presence of hotspots in CHM , as well as the identification of two different unrelated events involving exon 9 deletion. No certain genotype-phenotype correlation could be established. Furthermore, all the patients´ fibroblasts analyzed presented significantly increased levels of unprenylated Rabs proteins compared to control cells; however, this was not related to the genotype. This research demonstrates the major potential of the algorithm proposed for diagnosis. Our data enhance the importance of establish a differential diagnosis with other retinal dystrophies, supporting the idea of an underestimated prevalence of choroideremia. Moreover, they suggested that the severity of the disorder cannot be exclusively explained by the genotype.
Audience Academic
Author Avila-Fernandez, Almudena
Blanco-Kelly, Fiona
Lorda, Isabel
Villaverde, Cristina
Garcia-Sandoval, Blanca
Torriano, Simona
Sanchez-Alcudia, Rocio
Zurita, Olga
Ayuso, Carmen
Rodrigues-Jacy da Silva, Luciana
Gimenez, Ascension
Trujillo-Tiebas, Maria J
Riveiro-Alvarez, Rosa
Garcia-Hoyos, Maria
Rivolta, Carlo
Perez-Carro, Raquel
Lopez-Martinez, Miguel Angel
Sanchez-Bolivar, Noelia
Kalatzis, Vasiliki
Lopez-Molina, Maria Isabel
Corton, Marta
AuthorAffiliation 1 Department of Genetics, Instituto de Investigacion Sanitaria-Fundacion Jimenez Diaz (IIS-FJD), Madrid, Spain
Innsbruck Medical University, AUSTRIA
5 Department of Ophthalmology, IIS-Fundación Jiménez Díaz University Hospital, Madrid, Spain
4 Department of Medical Genetics, University of Lausanne, Lausanne, Switzerland
2 Centro de Investigacion Biomedica en Red de Enfermedades Raras (CIBERER), ISCIII, Madrid, Spain
3 Inserm U1051, Institute for Neurosciences of Montpellier, Montpellier, France
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BackLink https://www.ncbi.nlm.nih.gov/pubmed/27070432$$D View this record in MEDLINE/PubMed
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ContentType Journal Article
Copyright COPYRIGHT 2016 Public Library of Science
2016 Sanchez-Alcudia et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
2016 Sanchez-Alcudia et al 2016 Sanchez-Alcudia et al
Copyright_xml – notice: COPYRIGHT 2016 Public Library of Science
– notice: 2016 Sanchez-Alcudia et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
– notice: 2016 Sanchez-Alcudia et al 2016 Sanchez-Alcudia et al
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Current address: Universidad de Mogi das Cruzes, São Paulo, Brazil
Competing Interests: The authors have declared that no competing interests exist.
Current address: Instituto de Medicina Genomica, Valencia, Spain
Conceived and designed the experiments: RSA CR VK RRA CA. Performed the experiments: RSA MGH MALM NSB OZ AG CV LRJS MC RPC ST AAF. Analyzed the data: RSA MGH LRJS IL MJTT BGS MILM FBK. Contributed reagents/materials/analysis tools: RSA MALM NSB OZ AG CV MC RPC AAF. Wrote the paper: RSA CA.
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Snippet Choroideremia (CHM) is a rare X-linked disease leading to progressive retinal degeneration resulting in blindness. The disorder is caused by mutations in the...
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SubjectTerms Adaptor Proteins, Signal Transducing - genetics
Alkyl and Aryl Transferases - genetics
Analysis
Biology and Life Sciences
Blindness
Choroideremia
Choroideremia - genetics
Clonal deletion
Degeneration
Diagnosis
Differential diagnosis
DNA Mutational Analysis - methods
Exons - genetics
Female
Fibroblasts
Gene therapy
Genetic aspects
Genetic Association Studies - methods
Genetic screening
Genetic testing
Genetics
Genotypes
Geranylgeranyltransferase
Haplotypes
Haplotypes - genetics
Hospitals
Humans
Male
Medicine and Health Sciences
Messenger RNA
Mutation
Mutation - genetics
Neurosciences
Patients
Pedigree
Physical Sciences
Proteins
Reclassification
Research and Analysis Methods
Retina
Retinal degeneration
Risk factors
X chromosome
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Title A Comprehensive Analysis of Choroideremia: From Genetic Characterization to Clinical Practice
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