Amyloid-β protofibrils: size, morphology and synaptotoxicity of an engineered mimic

Structural and biochemical studies of the aggregation of the amyloid-β peptide (Aβ) are important to understand the mechanisms of Alzheimer's disease, but research is complicated by aggregate inhomogeneity and instability. We previously engineered a hairpin form of Aβ called Aβcc, which forms s...

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Published in:PloS one Vol. 8; no. 7; p. e66101
Main Authors: Dubnovitsky, Anatoly, Sandberg, Anders, Rahman, M Mahafuzur, Benilova, Iryna, Lendel, Christofer, Härd, Torleif
Format: Journal Article
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Published: United States Public Library of Science 2013
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Abstract Structural and biochemical studies of the aggregation of the amyloid-β peptide (Aβ) are important to understand the mechanisms of Alzheimer's disease, but research is complicated by aggregate inhomogeneity and instability. We previously engineered a hairpin form of Aβ called Aβcc, which forms stable protofibrils that do not convert into amyloid fibrils. Here we provide a detailed characterization of Aβ42cc protofibrils. Like wild type Aβ they appear as smooth rod-like particles with a diameter of 3.1 (±0.2) nm and typical lengths in the range 60 to 220 nm when observed by atomic force microscopy. Non-perturbing analytical ultracentrifugation and nanoparticle tracking analyses are consistent with such rod-like protofibrils. Aβ42cc protofibrils bind the ANS dye indicating that they, like other toxic protein aggregates, expose hydrophobic surface. Assays with the OC/A11 pair of oligomer specific antibodies put Aβ42cc protofibrils into the same class of species as fibrillar oligomers of wild type Aβ. Aβ42cc protofibrils may be used to extract binding proteins in biological fluids and apolipoprotein E is readily detected as a binder in human serum. Finally, Aβ42cc protofibrils act to attenuate spontaneous synaptic activity in mouse hippocampal neurons. The experiments indicate considerable structural and chemical similarities between protofibrils formed by Aβ42cc and aggregates of wild type Aβ42. We suggest that Aβ42cc protofibrils may be used in research and applications that require stable preparations of protofibrillar Aβ.
AbstractList Structural and biochemical studies of the aggregation of the amyloid-beta peptide (A beta) are important to understand the mechanisms of Alzheimer's disease, but research is complicated by aggregate inhomogeneity and instability. We previously engineered a hairpin form of A beta called A beta cc, which forms stable protofibrils that do not convert into amyloid fibrils. Here we provide a detailed characterization of A beta(42)cc protofibrils. Like wild type A beta they appear as smooth rod-like particles with a diameter of 3.1 (+/- 0.2) nm and typical lengths in the range 60 to 220 nm when observed by atomic force microscopy. Non-perturbing analytical ultracentrifugation and nanoparticle tracking analyses are consistent with such rod-like protofibrils. A beta(42)cc protofibrils bind the ANS dye indicating that they, like other toxic protein aggregates, expose hydrophobic surface. Assays with the OC/A11 pair of oligomer specific antibodies put A beta(42)cc protofibrils into the same class of species as fibrillar oligomers of wild type A beta. A beta(42)cc protofibrils may be used to extract binding proteins in biological fluids and apolipoprotein E is readily detected as a binder in human serum. Finally, A beta(42)cc protofibrils act to attenuate spontaneous synaptic activity in mouse hippocampal neurons. The experiments indicate considerable structural and chemical similarities between protofibrils formed by A beta(42)cc and aggregates of wild type A beta(42). We suggest that A beta(42)cc protofibrils may be used in research and applications that require stable preparations of protofibrillar A beta.
Structural and biochemical studies of the aggregation of the amyloid-β peptide (Aβ) are important to understand the mechanisms of Alzheimer's disease, but research is complicated by aggregate inhomogeneity and instability. We previously engineered a hairpin form of Aβ called Aβcc, which forms stable protofibrils that do not convert into amyloid fibrils. Here we provide a detailed characterization of Aβ42cc protofibrils. Like wild type Aβ they appear as smooth rod-like particles with a diameter of 3.1 (±0.2) nm and typical lengths in the range 60 to 220 nm when observed by atomic force microscopy. Non-perturbing analytical ultracentrifugation and nanoparticle tracking analyses are consistent with such rod-like protofibrils. Aβ42cc protofibrils bind the ANS dye indicating that they, like other toxic protein aggregates, expose hydrophobic surface. Assays with the OC/A11 pair of oligomer specific antibodies put Aβ42cc protofibrils into the same class of species as fibrillar oligomers of wild type Aβ. Aβ42cc protofibrils may be used to extract binding proteins in biological fluids and apolipoprotein E is readily detected as a binder in human serum. Finally, Aβ42cc protofibrils act to attenuate spontaneous synaptic activity in mouse hippocampal neurons. The experiments indicate considerable structural and chemical similarities between protofibrils formed by Aβ42cc and aggregates of wild type Aβ42. We suggest that Aβ42cc protofibrils may be used in research and applications that require stable preparations of protofibrillar Aβ.
Structural and biochemical studies of the aggregation of the amyloid-β peptide (Aβ) are important to understand the mechanisms of Alzheimer's disease, but research is complicated by aggregate inhomogeneity and instability. We previously engineered a hairpin form of Aβ called Aβ cc , which forms stable protofibrils that do not convert into amyloid fibrils. Here we provide a detailed characterization of Aβ 42 cc protofibrils. Like wild type Aβ they appear as smooth rod-like particles with a diameter of 3.1 (±0.2) nm and typical lengths in the range 60 to 220 nm when observed by atomic force microscopy. Non-perturbing analytical ultracentrifugation and nanoparticle tracking analyses are consistent with such rod-like protofibrils. Aβ 42 cc protofibrils bind the ANS dye indicating that they, like other toxic protein aggregates, expose hydrophobic surface. Assays with the OC/A11 pair of oligomer specific antibodies put Aβ 42 cc protofibrils into the same class of species as fibrillar oligomers of wild type Aβ. Aβ 42 cc protofibrils may be used to extract binding proteins in biological fluids and apolipoprotein E is readily detected as a binder in human serum. Finally, Aβ 42 cc protofibrils act to attenuate spontaneous synaptic activity in mouse hippocampal neurons. The experiments indicate considerable structural and chemical similarities between protofibrils formed by Aβ 42 cc and aggregates of wild type Aβ 42 . We suggest that Aβ 42 cc protofibrils may be used in research and applications that require stable preparations of protofibrillar Aβ.
Author Rahman, M Mahafuzur
Benilova, Iryna
Lendel, Christofer
Dubnovitsky, Anatoly
Sandberg, Anders
Härd, Torleif
AuthorAffiliation 1 Department of Molecular Biology, Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden
2 Alzinova AB, Gothenburg, Sweden
Cambridge Institute for Medical Research, United Kingdom
4 Center for Human Genetics, KULeuven, Leuven, Belgium
3 Department for Molecular and Developmental Genetics, Flanders Institute for Biotechnology (VIB), Leuven, Belgium
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Copyright 2013 Dubnovitsky et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
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Notes Current address: Department of Clinical Neuroscience, Karolinska Institutet, Stockholm, Sweden
Competing Interests: AS and TH have previously submitted a patent application entitled “Method for producing stable amyloid beta monomers and oligomers” (PCT/SE2009/050378) for which the IPR was subsequently transferred to the company Alzinova AB (Gothenburg, Sweden). AS and TH are now minority shareholders in Alzinova AB. This does not alter the authors' adherence to all the PLOS ONE policies on sharing data and materials.
Conceived and designed the experiments: AD AS IB CL TH. Performed the experiments: AD AS MMR IB. Analyzed the data: AD AS MMR IB CL TH. Wrote the paper: AD IB CL TH.
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Snippet Structural and biochemical studies of the aggregation of the amyloid-β peptide (Aβ) are important to understand the mechanisms of Alzheimer's disease, but...
Structural and biochemical studies of the aggregation of the amyloid-beta peptide (A beta) are important to understand the mechanisms of Alzheimer's disease,...
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SubjectTerms Aggregates
Alzheimer Disease - metabolism
Alzheimer's disease
Amyloid beta-Peptides - chemistry
Amyloid beta-Peptides - pharmacology
Amyloid beta-Peptides - ultrastructure
Animals
Antibodies
Apolipoprotein E
Apolipoproteins E - chemistry
Atomic force microscopy
Binding Sites
Biochemistry and Molecular Biology
Biofysik
Biokemi och molekylärbiologi
Biology
Biophysics
Cells, Cultured
Chemical bonds
Chemical fingerprinting
Chemistry
Chromatography
Dose-Response Relationship, Drug
Fibrils
Hippocampus
Hippocampus - cytology
Hippocampus - drug effects
Hippocampus - physiology
Humans
Hydrophobicity
Inhomogeneity
Läkemedelsbioteknik
Medicine
Mice
Microscopy
Microscopy, Atomic Force
Molecular biology
Molecular Mimicry
Morphology
Mutation
Nanoparticles
Neurodegenerative diseases
Neurons - cytology
Neurons - drug effects
Neurons - physiology
Oligomers
Particle Size
Peptide Fragments - chemistry
Peptide Fragments - pharmacology
Peptide Fragments - ultrastructure
Peptides
Pharmaceutical Biotechnology
Protein Binding
Protein Engineering
Protein folding
Protein Structure, Secondary
Proteins
Stability
Structural Biology
Strukturbiologi
Synapses
Synaptic Transmission
Ultracentrifugation
β-Amyloid
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Title Amyloid-β protofibrils: size, morphology and synaptotoxicity of an engineered mimic
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