Carbon conversion efficiency and central metabolic fluxes in developing sunflower (Helianthus annuus L.) embryos

The efficiency with which developing sunflower embryos convert substrates into seed storage reserves was determined by labeling embryos with [U-¹⁴C₆]glucose or [U-¹⁴C₅]glutamine and measuring their conversion to CO₂, oil, protein and other biomass compounds. The average carbon conversion efficiency...

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Published in:The Plant journal : for cell and molecular biology Vol. 52; no. 2; pp. 296 - 308
Main Authors: Alonso, Ana P, Goffman, Fernando D, Ohlrogge, John B, Shachar-Hill, Yair
Format: Journal Article
Language:English
Published: Oxford, UK Oxford, UK : Blackwell Publishing Ltd 01-10-2007
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Abstract The efficiency with which developing sunflower embryos convert substrates into seed storage reserves was determined by labeling embryos with [U-¹⁴C₆]glucose or [U-¹⁴C₅]glutamine and measuring their conversion to CO₂, oil, protein and other biomass compounds. The average carbon conversion efficiency was 50%, which contrasts with a value of over 80% previously observed in Brassica napus embryos ( Goffman et al., 2005 ), in which light and the RuBisCO bypass pathway allow more efficient conversion of hexose to oil. Labeling levels after incubating sunflower embryos with [U-¹⁴C₄]malate indicated that some carbon from malate enters the plastidic compartment and contributes to oil synthesis. To test this and to map the underlying pattern of metabolic fluxes, separate experiments were carried out in which embryos were labeled to isotopic steady state using [1-¹³C₁]glucose, [2-¹³C₁]glucose, or [U-¹³C₅]glutamine. The resultant labeling in sugars, starch, fatty acids and amino acids was analyzed by NMR and GC-MS. The fluxes through intermediary metabolism were then quantified by computer-aided modeling. The resulting flux map accounted well for the labeling data, was in good agreement with the observed carbon efficiency, and was further validated by testing for agreement with gas exchange measurements. The map shows that the influx of malate into oil is low and that flux through futile cycles (wasting ATP) is low, which contrasts with the high rates previously determined for growing root tips and heterotrophic cell cultures.
AbstractList The efficiency with which developing sunflower embryos convert substrates into seed storage reserves was determined by labeling embryos with [U-(14)C6]glucose or [U-(14)C5]glutamine and measuring their conversion to CO2, oil, protein and other biomass compounds. The average carbon conversion efficiency was 50%, which contrasts with a value of over 80% previously observed in Brassica napus embryos (Goffman et al., 2005), in which light and the RuBisCO bypass pathway allow more efficient conversion of hexose to oil. Labeling levels after incubating sunflower embryos with [U-(14)C4]malate indicated that some carbon from malate enters the plastidic compartment and contributes to oil synthesis. To test this and to map the underlying pattern of metabolic fluxes, separate experiments were carried out in which embryos were labeled to isotopic steady state using [1-(13)C1]glucose, [2-(13)C1]glucose, or [U-(13)C5]glutamine. The resultant labeling in sugars, starch, fatty acids and amino acids was analyzed by NMR and GC-MS. The fluxes through intermediary metabolism were then quantified by computer-aided modeling. The resulting flux map accounted well for the labeling data, was in good agreement with the observed carbon efficiency, and was further validated by testing for agreement with gas exchange measurements. The map shows that the influx of malate into oil is low and that flux through futile cycles (wasting ATP) is low, which contrasts with the high rates previously determined for growing root tips and heterotrophic cell cultures.
Summary The efficiency with which developing sunflower embryos convert substrates into seed storage reserves was determined by labeling embryos with [U‐ 14 C 6 ]glucose or [U‐ 14 C 5 ]glutamine and measuring their conversion to CO 2 , oil, protein and other biomass compounds. The average carbon conversion efficiency was 50%, which contrasts with a value of over 80% previously observed in Brassica napus embryos ( Goffman et al. , 2005 ), in which light and the RuBisCO bypass pathway allow more efficient conversion of hexose to oil. Labeling levels after incubating sunflower embryos with [U‐ 14 C 4 ]malate indicated that some carbon from malate enters the plastidic compartment and contributes to oil synthesis. To test this and to map the underlying pattern of metabolic fluxes, separate experiments were carried out in which embryos were labeled to isotopic steady state using [1‐ 13 C 1 ]glucose, [2‐ 13 C 1 ]glucose, or [U‐ 13 C 5 ]glutamine. The resultant labeling in sugars, starch, fatty acids and amino acids was analyzed by NMR and GC‐MS. The fluxes through intermediary metabolism were then quantified by computer‐aided modeling. The resulting flux map accounted well for the labeling data, was in good agreement with the observed carbon efficiency, and was further validated by testing for agreement with gas exchange measurements. The map shows that the influx of malate into oil is low and that flux through futile cycles (wasting ATP) is low, which contrasts with the high rates previously determined for growing root tips and heterotrophic cell cultures.
The efficiency with which developing sunflower embryos convert substrates into seed storage reserves was determined by labeling embryos with [U-¹⁴C₆]glucose or [U-¹⁴C₅]glutamine and measuring their conversion to CO₂, oil, protein and other biomass compounds. The average carbon conversion efficiency was 50%, which contrasts with a value of over 80% previously observed in Brassica napus embryos ( Goffman et al., 2005 ), in which light and the RuBisCO bypass pathway allow more efficient conversion of hexose to oil. Labeling levels after incubating sunflower embryos with [U-¹⁴C₄]malate indicated that some carbon from malate enters the plastidic compartment and contributes to oil synthesis. To test this and to map the underlying pattern of metabolic fluxes, separate experiments were carried out in which embryos were labeled to isotopic steady state using [1-¹³C₁]glucose, [2-¹³C₁]glucose, or [U-¹³C₅]glutamine. The resultant labeling in sugars, starch, fatty acids and amino acids was analyzed by NMR and GC-MS. The fluxes through intermediary metabolism were then quantified by computer-aided modeling. The resulting flux map accounted well for the labeling data, was in good agreement with the observed carbon efficiency, and was further validated by testing for agreement with gas exchange measurements. The map shows that the influx of malate into oil is low and that flux through futile cycles (wasting ATP) is low, which contrasts with the high rates previously determined for growing root tips and heterotrophic cell cultures.
The efficiency with which developing sunflower embryos convert substrates into seed storage reserves was determined by labeling embryos with [U-14C6]glucose or [U-14C5]glutamine and measuring their conversion to CO2, oil, protein and other biomass compounds. The average carbon conversion efficiency was 50%, which contrasts with a value of over 80% previously observed in Brassica napus embryos (Goffman et al., 2005), in which light and the RuBisCO bypass pathway allow more efficient conversion of hexose to oil. Labeling levels after incubating sunflower embryos with [U-14C4]malate indicated that some carbon from malate enters the plastidic compartment and contributes to oil synthesis. To test this and to map the underlying pattern of metabolic fluxes, separate experiments were carried out in which embryos were labeled to isotopic steady state using [1-13C1]glucose, [2-13C1]glucose, or [U-13C5]glutamine. The resultant labeling in sugars, starch, fatty acids and amino acids was analyzed by NMR and GC-MS. The fluxes through intermediary metabolism were then quantified by computer-aided modeling. The resulting flux map accounted well for the labeling data, was in good agreement with the observed carbon efficiency, and was further validated by testing for agreement with gas exchange measurements. The map shows that the influx of malate into oil is low and that flux through futile cycles (wasting ATP) is low, which contrasts with the high rates previously determined for growing root tips and heterotrophic cell cultures. [PUBLICATION ABSTRACT]
Summary The efficiency with which developing sunflower embryos convert substrates into seed storage reserves was determined by labeling embryos with [U‐14C6]glucose or [U‐14C5]glutamine and measuring their conversion to CO2, oil, protein and other biomass compounds. The average carbon conversion efficiency was 50%, which contrasts with a value of over 80% previously observed in Brassica napus embryos (Goffman et al., 2005), in which light and the RuBisCO bypass pathway allow more efficient conversion of hexose to oil. Labeling levels after incubating sunflower embryos with [U‐14C4]malate indicated that some carbon from malate enters the plastidic compartment and contributes to oil synthesis. To test this and to map the underlying pattern of metabolic fluxes, separate experiments were carried out in which embryos were labeled to isotopic steady state using [1‐13C1]glucose, [2‐13C1]glucose, or [U‐13C5]glutamine. The resultant labeling in sugars, starch, fatty acids and amino acids was analyzed by NMR and GC‐MS. The fluxes through intermediary metabolism were then quantified by computer‐aided modeling. The resulting flux map accounted well for the labeling data, was in good agreement with the observed carbon efficiency, and was further validated by testing for agreement with gas exchange measurements. The map shows that the influx of malate into oil is low and that flux through futile cycles (wasting ATP) is low, which contrasts with the high rates previously determined for growing root tips and heterotrophic cell cultures.
Author Ohlrogge, John B
Alonso, Ana P
Goffman, Fernando D
Shachar-Hill, Yair
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Issue 2
Keywords Seeds
metabolic flux analysis
Root
sunflower embryo
Starch
Carbon dioxide
Biomass
Compositae
Metabolism
Fatty acids
oilseed filling
Helianthus annuus
isotopic labeling
fatty acid synthesis
Cruciferae
carbon conversion efficiency
Dicotyledones
Aminoacid
Angiospermae
Brassica napus
Spermatophyta
Gas exchange
ATP
EC 4.1.1.39
Language English
License CC BY 4.0
LinkModel DirectLink
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Notes http://dx.doi.org/10.1111/j.1365-313X.2007.03235.x
Present address: UMR5504, UMR792 Ingénierie des Systèmes Biologiques et des Procédés, CNRS, INRA, INSA, F‐31400 Toulouse, France.
Present address: Philip Morris International, R&D Department, Quai Jeanrenaud 56, 2000 Neuchatel, Switzerland.
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PublicationTitle The Plant journal : for cell and molecular biology
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Blackwell Science
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2006; 97
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SSID ssj0017364
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Snippet The efficiency with which developing sunflower embryos convert substrates into seed storage reserves was determined by labeling embryos with [U-¹⁴C₆]glucose or...
Summary The efficiency with which developing sunflower embryos convert substrates into seed storage reserves was determined by labeling embryos with...
The efficiency with which developing sunflower embryos convert substrates into seed storage reserves was determined by labeling embryos with [U-(14)C6]glucose...
Summary The efficiency with which developing sunflower embryos convert substrates into seed storage reserves was determined by labeling embryos with [U‐ 14 C 6...
The efficiency with which developing sunflower embryos convert substrates into seed storage reserves was determined by labeling embryos with [U-14C6]glucose or...
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SubjectTerms Agronomy. Soil science and plant productions
Biochemistry
Biological and medical sciences
Botany
Carbon
Carbon - metabolism
carbon conversion efficiency
Carbon Radioisotopes
Cellular biology
Economic plant physiology
Embryo development. Germination
fatty acid synthesis
Fatty Acids - biosynthesis
Fundamental and applied biological sciences. Psychology
Growth and development
Helianthus - embryology
Helianthus - metabolism
isotopic labeling
metabolic flux analysis
Metabolism
oilseed filling
Plant Oils - metabolism
Seeds - metabolism
Staining and Labeling
sunflower embryo
Tissue Culture Techniques
Title Carbon conversion efficiency and central metabolic fluxes in developing sunflower (Helianthus annuus L.) embryos
URI https://onlinelibrary.wiley.com/doi/abs/10.1111%2Fj.1365-313X.2007.03235.x
https://www.ncbi.nlm.nih.gov/pubmed/17683473
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https://search.proquest.com/docview/68359044
Volume 52
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