Unique microRNA‐profiles in EGFR‐mutated lung adenocarcinomas

The findings of mutations and the development of targeted therapies have improved lung cancer management. Still, the prognosis remains poor, and we need to know more about the genetic and epigenetic alterations in lung cancer. MicroRNAs are involved in crucial biological processes like carcinogenesi...

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Published in:International journal of cancer Vol. 135; no. 8; pp. 1812 - 1821
Main Authors: Bjaanæs, Maria Moksnes, Halvorsen, Ann Rita, Solberg, Steinar, Jørgensen, Lars, Dragani, Tommaso A., Galvan, Antonella, Colombo, Francesca, Anderlini, Marco, Pastorino, Ugo, Kure, Elin, Børresen‐Dale, Anne‐Lise, Brustugun, Odd Terje, Helland, Åslaug
Format: Journal Article
Language:English
Published: Hoboken, NJ Wiley-Blackwell 15-10-2014
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Abstract The findings of mutations and the development of targeted therapies have improved lung cancer management. Still, the prognosis remains poor, and we need to know more about the genetic and epigenetic alterations in lung cancer. MicroRNAs are involved in crucial biological processes like carcinogenesis by regulating gene expression at the post‐transcriptional level. In this project, we have studied the microRNA expression of lung adenocarcinomas and corresponding normal lung tissue and correlated the expression with clinical data and EGFR‐ and KRAS‐mutational status. Agilent microarrays have been used, examining microRNA expression in 154 surgically resected lung adenocarcinomas and 20 corresponding normal lung tissue samples. Findings were confirmed by RT‐qPCR in the same cohort and in an independent cohort of 103 lung cancer patients. EGFR and KRAS mutation analyses were also performed. 129 microRNAs were significantly differentially expressed in lung adenocarcinomas compared with normal lung tissue, and 17 microRNAs were differentially expressed between EGFR‐mutated and EGFR wildtype tumors. We identified microRNAs associated with time to progression. We have identified several aberrantly expressed microRNAs that discriminate lung adenocarcinomas from normal lung tissue, and hence may be potential biomarkers for early detection. We have found microRNAs that are differentially expressed between EGFR‐mutated and EGFR wildtype lung adenocarcinomas, suggesting that microRNAs can be used as molecular biomarkers in classification. We hypothesize that microRNA expression can be used as biomarkers for clinical course. What's new? Precise molecular mechanisms for the altered expression of microRNAs in lung cancer are unclear. Here, the authors analyzed microRNA expression in a large sample set of lung adenocarcinomas and corresponding normal lung tissue. They identified several aberrantly expressed microRNAs that discriminate lung adenocarcinomas from normal tissue and are thus potential biomarkers for early detection. They found microRNAs differentially expressed between EGFR‐mutated and EGFR wild‐type lung adenocarcinomas, suggesting that microRNAs can be used as molecular biomarkers in classification. Moreover, miR‐500a* expression was associated with time to progression. This study suggests that microRNA expression can be used as biomarkers for clinical course.
AbstractList The findings of mutations and the development of targeted therapies have improved lung cancer management. Still, the prognosis remains poor, and we need to know more about the genetic and epigenetic alterations in lung cancer. MicroRNAs are involved in crucial biological processes like carcinogenesis by regulating gene expression at the post‐transcriptional level. In this project, we have studied the microRNA expression of lung adenocarcinomas and corresponding normal lung tissue and correlated the expression with clinical data and EGFR‐ and KRAS‐mutational status. Agilent microarrays have been used, examining microRNA expression in 154 surgically resected lung adenocarcinomas and 20 corresponding normal lung tissue samples. Findings were confirmed by RT‐qPCR in the same cohort and in an independent cohort of 103 lung cancer patients. EGFR and KRAS mutation analyses were also performed. 129 microRNAs were significantly differentially expressed in lung adenocarcinomas compared with normal lung tissue, and 17 microRNAs were differentially expressed between EGFR‐mutated and EGFR wildtype tumors. We identified microRNAs associated with time to progression. We have identified several aberrantly expressed microRNAs that discriminate lung adenocarcinomas from normal lung tissue, and hence may be potential biomarkers for early detection. We have found microRNAs that are differentially expressed between EGFR‐mutated and EGFR wildtype lung adenocarcinomas, suggesting that microRNAs can be used as molecular biomarkers in classification. We hypothesize that microRNA expression can be used as biomarkers for clinical course. What's new? Precise molecular mechanisms for the altered expression of microRNAs in lung cancer are unclear. Here, the authors analyzed microRNA expression in a large sample set of lung adenocarcinomas and corresponding normal lung tissue. They identified several aberrantly expressed microRNAs that discriminate lung adenocarcinomas from normal tissue and are thus potential biomarkers for early detection. They found microRNAs differentially expressed between EGFR‐mutated and EGFR wild‐type lung adenocarcinomas, suggesting that microRNAs can be used as molecular biomarkers in classification. Moreover, miR‐500a* expression was associated with time to progression. This study suggests that microRNA expression can be used as biomarkers for clinical course.
The findings of mutations and the development of targeted therapies have improved lung cancer management. Still, the prognosis remains poor, and we need to know more about the genetic and epigenetic alterations in lung cancer. MicroRNAs are involved in crucial biological processes like carcinogenesis by regulating gene expression at the post-transcriptional level. In this project, we have studied the microRNA expression of lung adenocarcinomas and corresponding normal lung tissue and correlated the expression with clinical data and EGFR- and KRAS-mutational status. Agilent microarrays have been used, examining microRNA expression in 154 surgically resected lung adenocarcinomas and 20 corresponding normal lung tissue samples. Findings were confirmed by RT-qPCR in the same cohort and in an independent cohort of 103 lung cancer patients. EGFR and KRAS mutation analyses were also performed. 129 microRNAs were significantly differentially expressed in lung adenocarcinomas compared with normal lung tissue, and 17 microRNAs were differentially expressed between EGFR-mutated and EGFR wildtype tumors. We identified microRNAs associated with time to progression. We have identified several aberrantly expressed microRNAs that discriminate lung adenocarcinomas from normal lung tissue, and hence may be potential biomarkers for early detection. We have found microRNAs that are differentially expressed between EGFR-mutated and EGFR wildtype lung adenocarcinomas, suggesting that microRNAs can be used as molecular biomarkers in classification. We hypothesize that microRNA expression can be used as biomarkers for clinical course.
The findings of mutations and the development of targeted therapies have improved lung cancer management. Still, the prognosis remains poor, and we need to know more about the genetic and epigenetic alterations in lung cancer. MicroRNAs are involved in crucial biological processes like carcinogenesis by regulating gene expression at the post-transcriptional level. In this project, we have studied the microRNA expression of lung adenocarcinomas and corresponding normal lung tissue and correlated the expression with clinical data and EGFR- and KRAS-mutational status. Agilent microarrays have been used, examining microRNA expression in 154 surgically resected lung adenocarcinomas and 20 corresponding normal lung tissue samples. Findings were confirmed by RT-qPCR in the same cohort and in an independent cohort of 103 lung cancer patients. EGFR and KRAS mutation analyses were also performed. 129 microRNAs were significantly differentially expressed in lung adenocarcinomas compared with normal lung tissue, and 17 microRNAs were differentially expressed between EGFR-mutated and EGFR wildtype tumors. We identified microRNAs associated with time to progression. We have identified several aberrantly expressed microRNAs that discriminate lung adenocarcinomas from normal lung tissue, and hence may be potential biomarkers for early detection. We have found microRNAs that are differentially expressed between EGFR-mutated and EGFR wildtype lung adenocarcinomas, suggesting that microRNAs can be used as molecular biomarkers in classification. We hypothesize that microRNA expression can be used as biomarkers for clinical course. What's new? Precise molecular mechanisms for the altered expression of microRNAs in lung cancer are unclear. Here, the authors analyzed microRNA expression in a large sample set of lung adenocarcinomas and corresponding normal lung tissue. They identified several aberrantly expressed microRNAs that discriminate lung adenocarcinomas from normal tissue and are thus potential biomarkers for early detection. They found microRNAs differentially expressed between EGFR-mutated and EGFR wild-type lung adenocarcinomas, suggesting that microRNAs can be used as molecular biomarkers in classification. Moreover, miR-500a* expression was associated with time to progression. This study suggests that microRNA expression can be used as biomarkers for clinical course. [PUBLICATION ABSTRACT]
Author Kure, Elin
Dragani, Tommaso A.
Anderlini, Marco
Helland, Åslaug
Halvorsen, Ann Rita
Pastorino, Ugo
Brustugun, Odd Terje
Colombo, Francesca
Bjaanæs, Maria Moksnes
Jørgensen, Lars
Solberg, Steinar
Galvan, Antonella
Børresen‐Dale, Anne‐Lise
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  fullname: Helland, Åslaug
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IsDoiOpenAccess true
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Issue 8
Keywords Lung disease
RNA interference
Respiratory disease
Lung cancer
Micro RNA
Malignant tumor
Bronchopulmonary adenocarcinoma
Survival
Epidermal growth factor receptor
EGFR
K ras Gene
Gene silencing
Cancerology
C-Onc gene
Bronchus disease
microRNA
KRAS
Mutation
Protooncogene
Cancer
lung cancer
survival
Language English
License Attribution-NonCommercial-NoDerivs
CC BY 4.0
2014 The Authors. Published by Wiley Periodicals, Inc. on behalf of UICC.
This is an open access article under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
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Notes http://www.ncbi.nlm.nih.gov/geo
The microRNA microarray data have been deposited in the Gene Expression Omnibus (GEO)
Conception and design (MB, RH, OTB, ÅH), including patients for the study and provision of samples (SS, LJ, UP), acquisition of data (MB, RH, AG, FC, MA), analysis and interpretation of data (MB, RH, ÅH), drafting of the manuscript (MB, ÅH), critical revision of the manuscript (EK, SS, TD, AG, RH, OTB, ALBD) and study supervision (ÅH, OTB).
Conflicts of interests
Data deposition
with the accession number GSE48414.
No potential conflicts of interest were disclosed.
Author contributions
Data deposition: The microRNA microarray data have been deposited in the Gene Expression Omnibus (GEO) (http://www.ncbi.nlm.nih.gov/geo) with the accession number GSE48414.
Grant sponsor: the EUROCAN platform (FP7); Grant number: 260791; Grant sponsor: South-Eastern Norway Regional Health Authority
Conflicts of interests: No potential conflicts of interest were disclosed.
Author contributions: Conception and design (MB, RH, OTB, ÅH), including patients for the study and provision of samples (SS, LJ, UP), acquisition of data (MB, RH, AG, FC, MA), analysis and interpretation of data (MB, RH, ÅH), drafting of the manuscript (MB, ÅH), critical revision of the manuscript (EK, SS, TD, AG, RH, OTB, ALBD) and study supervision (ÅH, OTB).
OpenAccessLink https://onlinelibrary.wiley.com/doi/abs/10.1002%2Fijc.28828
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PublicationTitle International journal of cancer
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BlackWell Publishing Ltd
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Snippet The findings of mutations and the development of targeted therapies have improved lung cancer management. Still, the prognosis remains poor, and we need to...
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SubjectTerms Adenocarcinoma - genetics
Adenocarcinoma - metabolism
Adenocarcinoma - mortality
Adenocarcinoma of Lung
Aged
Biological and medical sciences
Biomarkers
Cancer
Cancer Genetics
Cohort Studies
DNA Mutational Analysis
EGFR
ErbB Receptors - genetics
Female
Gene expression
Humans
Kaplan-Meier Estimate
KRAS
Lung cancer
Lung Neoplasms - genetics
Lung Neoplasms - metabolism
Lung Neoplasms - mortality
Male
Medical research
Medical sciences
microRNA
MicroRNAs
MicroRNAs - genetics
MicroRNAs - metabolism
Middle Aged
Multiple tumors. Solid tumors. Tumors in childhood (general aspects)
Mutation
Oligonucleotide Array Sequence Analysis
Pneumology
Proportional Hazards Models
Proto-Oncogene Proteins - genetics
Proto-Oncogene Proteins p21(ras)
ras Proteins - genetics
survival
Transcriptome
Tumors
Tumors of the respiratory system and mediastinum
Title Unique microRNA‐profiles in EGFR‐mutated lung adenocarcinomas
URI https://onlinelibrary.wiley.com/doi/abs/10.1002%2Fijc.28828
https://www.ncbi.nlm.nih.gov/pubmed/24599520
https://www.proquest.com/docview/1551560681
https://pubmed.ncbi.nlm.nih.gov/PMC4235315
Volume 135
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