The Auxin-Response Repressor IAA30 Is Down-Regulated in Reproductive Tissues of Apomictic Paspalum notatum

The capacity for apomixis in is controlled by a single-dominant genomic region, which shows strong synteny to a portion of rice chromosome 12 long arm. The locus LOC_Os12g40890, encoding the Auxin/Indole-3-Acetic Acid (Aux/IAA) family member is located in this rice genomic segment. The objectives of...

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Published in:	Plants (Basel) Vol. 11; no. 11; p. 1472
Main Authors:	Siena, Lorena Adelina, Azzaro, Celeste Antonela, Podio, Maricel, Stein, Juliana, Leblanc, Olivier, Pessino, Silvina Claudia, Ortiz, Juan Pablo Amelio
Format:	Journal Article
Language:	English
Published:	Switzerland MDPI AG 31-05-2022 MDPI
Subjects:	Acetic acid Amino acids Apomixis Aux/IAA auxin Auxins Chromosome 12 Embryos Genes Genetic engineering Genomics Indoleacetic acid Kinases Life Sciences Metabolism Organs Ovules Paspalum notatum Phylogenetics Phylogeny plant reproductive development Proteins Reproductive organs Rice Seeds Synteny Transcriptomes apomixis Aux/IAA plant reproductive development auxin Paspalum notatum
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Abstract	The capacity for apomixis in is controlled by a single-dominant genomic region, which shows strong synteny to a portion of rice chromosome 12 long arm. The locus LOC_Os12g40890, encoding the Auxin/Indole-3-Acetic Acid (Aux/IAA) family member is located in this rice genomic segment. The objectives of this work were to identify transcripts coding for Aux/IAA proteins expressed in reproductive tissues of , detect the putative ortholog and analyze its temporal and spatial expression pattern in reproductive organs of sexual and apomictic plants. Thirty-three transcripts coding for AUX/IAA proteins were identified. Predicted protein alignment and phylogenetic analysis detected a highly similar sequence to (named as present in both sexual and apomictic samples. The expression assays of showed a significant down-regulation in apomictic spikelets compared to sexual ones at the stages of anthesis and post-anthesis, representation levels negatively correlated with apospory expressivity and different localizations in sexual and apomictic ovules. Several predicted interactors also appeared differentially regulated in the sexual and apomictic floral transcriptomes. Our results showed that an auxin-response repressor similar to is down-regulated in apomictic spikelets of and suggests a contrasting regulation of auxin signaling during sexual and asexual seed formation.
AbstractList	The capacity for apomixis in Paspalum notatum is controlled by a single-dominant genomic region, which shows strong synteny to a portion of rice chromosome 12 long arm. The locus LOC_Os12g40890, encoding the Auxin/Indole-3-Acetic Acid (Aux/IAA) family member OsIAA30, is located in this rice genomic segment. The objectives of this work were to identify transcripts coding for Aux/IAA proteins expressed in reproductive tissues of P. notatum , detect the OsIAA30 putative ortholog and analyze its temporal and spatial expression pattern in reproductive organs of sexual and apomictic plants. Thirty-three transcripts coding for AUX/IAA proteins were identified. Predicted protein alignment and phylogenetic analysis detected a highly similar sequence to OsIAA30 (named as PnIAA30) present in both sexual and apomictic samples. The expression assays of PnIAA30 showed a significant down-regulation in apomictic spikelets compared to sexual ones at the stages of anthesis and post-anthesis, representation levels negatively correlated with apospory expressivity and different localizations in sexual and apomictic ovules. Several PnIAA30 predicted interactors also appeared differentially regulated in the sexual and apomictic floral transcriptomes. Our results showed that an auxin-response repressor similar to OsIAA30 is down-regulated in apomictic spikelets of P. notatum and suggests a contrasting regulation of auxin signaling during sexual and asexual seed formation. The capacity for apomixis in Paspalum notatum is controlled by a single-dominant genomic region, which shows strong synteny to a portion of rice chromosome 12 long arm. The locus LOC_Os12g40890, encoding the Auxin/Indole-3-Acetic Acid (Aux/IAA) family member OsIAA30, is located in this rice genomic segment. The objectives of this work were to identify transcripts coding for Aux/IAA proteins expressed in reproductive tissues of P. notatum, detect the OsIAA30 putative ortholog and analyze its temporal and spatial expression pattern in reproductive organs of sexual and apomictic plants. Thirty-three transcripts coding for AUX/IAA proteins were identified. Predicted protein alignment and phylogenetic analysis detected a highly similar sequence to OsIAA30 (named as PnIAA30) present in both sexual and apomictic samples. The expression assays of PnIAA30 showed a significant down-regulation in apomictic spikelets compared to sexual ones at the stages of anthesis and post-anthesis, representation levels negatively correlated with apospory expressivity and different localizations in sexual and apomictic ovules. Several PnIAA30 predicted interactors also appeared differentially regulated in the sexual and apomictic floral transcriptomes. Our results showed that an auxin-response repressor similar to OsIAA30 is down-regulated in apomictic spikelets of P. notatum and suggests a contrasting regulation of auxin signaling during sexual and asexual seed formation. The capacity for apomixis in is controlled by a single-dominant genomic region, which shows strong synteny to a portion of rice chromosome 12 long arm. The locus LOC_Os12g40890, encoding the Auxin/Indole-3-Acetic Acid (Aux/IAA) family member is located in this rice genomic segment. The objectives of this work were to identify transcripts coding for Aux/IAA proteins expressed in reproductive tissues of , detect the putative ortholog and analyze its temporal and spatial expression pattern in reproductive organs of sexual and apomictic plants. Thirty-three transcripts coding for AUX/IAA proteins were identified. Predicted protein alignment and phylogenetic analysis detected a highly similar sequence to (named as present in both sexual and apomictic samples. The expression assays of showed a significant down-regulation in apomictic spikelets compared to sexual ones at the stages of anthesis and post-anthesis, representation levels negatively correlated with apospory expressivity and different localizations in sexual and apomictic ovules. Several predicted interactors also appeared differentially regulated in the sexual and apomictic floral transcriptomes. Our results showed that an auxin-response repressor similar to is down-regulated in apomictic spikelets of and suggests a contrasting regulation of auxin signaling during sexual and asexual seed formation.
Author	Leblanc, Olivier Azzaro, Celeste Antonela Stein, Juliana Siena, Lorena Adelina Pessino, Silvina Claudia Ortiz, Juan Pablo Amelio Podio, Maricel
AuthorAffiliation	1 Laboratorio de Biología Molecular, Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR) CONICET-UNR, Facultad de Ciencias Agrarias, Campo Experimental Villarino, Universidad Nacional de Rosario, Zavalla S2125ZAA, Santa Fe, Argentina; siena@iicar-conicet.gob.ar (L.A.S.); celesteazzaro@hotmail.com (C.A.A.); podio@iicar-conicet.gob.ar (M.P.); jstein@unr.edu.ar (J.S.); pessino@iicar-conicet.gob.ar (S.C.P.) 2 DIADE, Université de Montpellier, IRD, CIRAD, 34394 Montpellier, France; olivier.leblanc@ird.fr
AuthorAffiliation_xml	– name: 1 Laboratorio de Biología Molecular, Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR) CONICET-UNR, Facultad de Ciencias Agrarias, Campo Experimental Villarino, Universidad Nacional de Rosario, Zavalla S2125ZAA, Santa Fe, Argentina; siena@iicar-conicet.gob.ar (L.A.S.); celesteazzaro@hotmail.com (C.A.A.); podio@iicar-conicet.gob.ar (M.P.); jstein@unr.edu.ar (J.S.); pessino@iicar-conicet.gob.ar (S.C.P.) – name: 2 DIADE, Université de Montpellier, IRD, CIRAD, 34394 Montpellier, France; olivier.leblanc@ird.fr
Author_xml	– sequence: 1 givenname: Lorena Adelina surname: Siena fullname: Siena, Lorena Adelina organization: Laboratorio de Biología Molecular, Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR) CONICET-UNR, Facultad de Ciencias Agrarias, Campo Experimental Villarino, Universidad Nacional de Rosario, Zavalla S2125ZAA, Santa Fe, Argentina – sequence: 2 givenname: Celeste Antonela surname: Azzaro fullname: Azzaro, Celeste Antonela organization: Laboratorio de Biología Molecular, Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR) CONICET-UNR, Facultad de Ciencias Agrarias, Campo Experimental Villarino, Universidad Nacional de Rosario, Zavalla S2125ZAA, Santa Fe, Argentina – sequence: 3 givenname: Maricel orcidid: 0000-0001-9797-1089 surname: Podio fullname: Podio, Maricel organization: Laboratorio de Biología Molecular, Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR) CONICET-UNR, Facultad de Ciencias Agrarias, Campo Experimental Villarino, Universidad Nacional de Rosario, Zavalla S2125ZAA, Santa Fe, Argentina – sequence: 4 givenname: Juliana surname: Stein fullname: Stein, Juliana organization: Laboratorio de Biología Molecular, Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR) CONICET-UNR, Facultad de Ciencias Agrarias, Campo Experimental Villarino, Universidad Nacional de Rosario, Zavalla S2125ZAA, Santa Fe, Argentina – sequence: 5 givenname: Olivier surname: Leblanc fullname: Leblanc, Olivier organization: DIADE, Université de Montpellier, IRD, CIRAD, 34394 Montpellier, France – sequence: 6 givenname: Silvina Claudia surname: Pessino fullname: Pessino, Silvina Claudia organization: Laboratorio de Biología Molecular, Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR) CONICET-UNR, Facultad de Ciencias Agrarias, Campo Experimental Villarino, Universidad Nacional de Rosario, Zavalla S2125ZAA, Santa Fe, Argentina – sequence: 7 givenname: Juan Pablo Amelio surname: Ortiz fullname: Ortiz, Juan Pablo Amelio organization: Laboratorio de Biología Molecular, Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR) CONICET-UNR, Facultad de Ciencias Agrarias, Campo Experimental Villarino, Universidad Nacional de Rosario, Zavalla S2125ZAA, Santa Fe, Argentina
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Keywords	apomixis Aux/IAA plant reproductive development auxin Paspalum notatum
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Snippet	The capacity for apomixis in is controlled by a single-dominant genomic region, which shows strong synteny to a portion of rice chromosome 12 long arm. The... The capacity for apomixis in Paspalum notatum is controlled by a single-dominant genomic region, which shows strong synteny to a portion of rice chromosome 12... The capacity for apomixis in Paspalum notatum is controlled by a single-dominant genomic region, which shows strong synteny to a portion of rice chromosome 12...
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SubjectTerms	Acetic acid Amino acids Apomixis Aux/IAA auxin Auxins Chromosome 12 Embryos Genes Genetic engineering Genomics Indoleacetic acid Kinases Life Sciences Metabolism Organs Ovules Paspalum notatum Phylogenetics Phylogeny plant reproductive development Proteins Reproductive organs Rice Seeds Synteny Transcriptomes
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Title	The Auxin-Response Repressor IAA30 Is Down-Regulated in Reproductive Tissues of Apomictic Paspalum notatum
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