Association of LIPC and advanced age-related macular degeneration
Purpose To determine whether there is an association between hepatic lipase ( LIPC ) and age-related macular degeneration (AMD) in two independent Caucasian cohorts. Methods A discovery cohort of 1626 patients with advanced AMD and 859 normal controls and a replication cohort of 2159 cases and 1150...
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Published in: | Eye (London) Vol. 27; no. 2; pp. 265 - 271 |
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Main Authors: | , , , , , , , , , , , , , , , , , , , |
Format: | Journal Article |
Language: | English |
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Abstract | Purpose
To determine whether there is an association between hepatic lipase (
LIPC
) and age-related macular degeneration (AMD) in two independent Caucasian cohorts.
Methods
A discovery cohort of 1626 patients with advanced AMD and 859 normal controls and a replication cohort of 2159 cases and 1150 controls were genotyped for two single-nucleotide polymorphisms (SNPs) in the promoter region of
LIPC
. The associations between the SNPs and AMD were examined by
χ
2
tests.
Results
In the discovery cohort, rs493258 and rs10468017 were both associated with advanced AMD (
P
=9.63E−3 and
P
=0.048, respectively). The association was corroborated in the replication cohort (
P
=4.48E−03 for rs493258 and
P
=0.015 for rs10468017). Combined analysis resulted in even more significant associations (
P
=1.21E−04 for rs493258 and
P
=1.67E−03 for rs10468017).
Conclusion
The
LIPC
promoter variants rs493258 and rs10468017 were associated with advanced AMD in two independent Caucasian populations, confirming that
LIPC
polymorphisms may be a genetic risk factor for AMD in the Caucasian population. |
---|---|
AbstractList | Purpose
To determine whether there is an association between hepatic lipase (
LIPC
) and age-related macular degeneration (AMD) in two independent Caucasian cohorts.
Methods
A discovery cohort of 1626 patients with advanced AMD and 859 normal controls and a replication cohort of 2159 cases and 1150 controls were genotyped for two single-nucleotide polymorphisms (SNPs) in the promoter region of
LIPC
. The associations between the SNPs and AMD were examined by
χ
2
tests.
Results
In the discovery cohort, rs493258 and rs10468017 were both associated with advanced AMD (
P
=9.63E−3 and
P
=0.048, respectively). The association was corroborated in the replication cohort (
P
=4.48E−03 for rs493258 and
P
=0.015 for rs10468017). Combined analysis resulted in even more significant associations (
P
=1.21E−04 for rs493258 and
P
=1.67E−03 for rs10468017).
Conclusion
The
LIPC
promoter variants rs493258 and rs10468017 were associated with advanced AMD in two independent Caucasian populations, confirming that
LIPC
polymorphisms may be a genetic risk factor for AMD in the Caucasian population. PURPOSETo determine whether there is an association between hepatic lipase (LIPC) and age-related macular degeneration (AMD) in two independent Caucasian cohorts. METHODSA discovery cohort of 1626 patients with advanced AMD and 859 normal controls and a replication cohort of 2159 cases and 1150 controls were genotyped for two single-nucleotide polymorphisms (SNPs) in the promoter region of LIPC. The associations between the SNPs and AMD were examined by χ(2) tests. RESULTSIn the discovery cohort, rs493258 and rs10468017 were both associated with advanced AMD (P=9.63E-3 and P=0.048, respectively). The association was corroborated in the replication cohort (P=4.48E-03 for rs493258 and P=0.015 for rs10468017). Combined analysis resulted in even more significant associations (P=1.21E-04 for rs493258 and P=1.67E-03 for rs10468017). CONCLUSIONThe LIPC promoter variants rs493258 and rs10468017 were associated with advanced AMD in two independent Caucasian populations, confirming that LIPC polymorphisms may be a genetic risk factor for AMD in the Caucasian population. To determine whether there is an association between hepatic lipase (LIPC) and age-related macular degeneration (AMD) in two independent Caucasian cohorts. A discovery cohort of 1626 patients with advanced AMD and 859 normal controls and a replication cohort of 2159 cases and 1150 controls were genotyped for two single-nucleotide polymorphisms (SNPs) in the promoter region of LIPC. The associations between the SNPs and AMD were examined by χ(2) tests. In the discovery cohort, rs493258 and rs10468017 were both associated with advanced AMD (P=9.63E-3 and P=0.048, respectively). The association was corroborated in the replication cohort (P=4.48E-03 for rs493258 and P=0.015 for rs10468017). Combined analysis resulted in even more significant associations (P=1.21E-04 for rs493258 and P=1.67E-03 for rs10468017). The LIPC promoter variants rs493258 and rs10468017 were associated with advanced AMD in two independent Caucasian populations, confirming that LIPC polymorphisms may be a genetic risk factor for AMD in the Caucasian population. To determine whether there is an association between hepatic lipase (LIPC) and age-related macular degeneration (AMD) in two independent Caucasian cohorts. A discovery cohort of 1626 patients with advanced AMD and 859 normal controls and a replication cohort of 2159 cases and 1150 controls were genotyped for two single-nucleotide polymorphisms (SNPs) in the promoter region of LIPC. The associations between the SNPs and AMD were examined by χ(2) tests. In the discovery cohort, rs493258 and rs10468017 were both associated with advanced AMD (P=9.63E-3 and P=0.048, respectively). The association was corroborated in the replication cohort (P=4.48E-03 for rs493258 and P=0.015 for rs10468017). Combined analysis resulted in even more significant associations (P=1.21E-04 for rs493258 and P=1.67E-03 for rs10468017). The LIPC promoter variants rs493258 and rs10468017 were associated with advanced AMD in two independent Caucasian populations, confirming that LIPC polymorphisms may be a genetic risk factor for AMD in the Caucasian population. |
Author | Lee, J Luo, J Krupa, M Goldbaum, M Chen, Y Zhu, J Grob, S Lee, C Zhang, X Zhao, L Haw, W Hughes, G Zeng, J Quach, J Ferreyra, H Shaw, P X Wei, X Tang, L Zhang, K Duan, Y |
Author_xml | – sequence: 1 givenname: J surname: Lee fullname: Lee, J organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 2 givenname: J surname: Zeng fullname: Zeng, J organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego, Department of Ophthalmology, Second Xiangya Hospital, Central South University, Department of Ophthalmology and Visual Sciences, Moran Eye Center, University of Utah School of Medicine – sequence: 3 givenname: G surname: Hughes fullname: Hughes, G organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 4 givenname: Y surname: Chen fullname: Chen, Y organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego, Department of Ophthalmology and Visual Sciences, Moran Eye Center, University of Utah School of Medicine, Department of Ophthalmology and Vision Science, Eye and ENT Hospital, Shanghai Medical School, Fudan University – sequence: 5 givenname: S surname: Grob fullname: Grob, S organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 6 givenname: L surname: Zhao fullname: Zhao, L organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 7 givenname: C surname: Lee fullname: Lee, C organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 8 givenname: M surname: Krupa fullname: Krupa, M organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 9 givenname: J surname: Quach fullname: Quach, J organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 10 givenname: J surname: Luo fullname: Luo, J organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 11 givenname: J surname: Zeng fullname: Zeng, J organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 12 givenname: X surname: Wei fullname: Wei, X organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 13 givenname: X surname: Zhang fullname: Zhang, X organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 14 givenname: J surname: Zhu fullname: Zhu, J organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 15 givenname: Y surname: Duan fullname: Duan, Y organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 16 givenname: H surname: Ferreyra fullname: Ferreyra, H organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 17 givenname: M surname: Goldbaum fullname: Goldbaum, M organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 18 givenname: W surname: Haw fullname: Haw, W organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego – sequence: 19 givenname: P X surname: Shaw fullname: Shaw, P X organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego, Department of Ophthalmology, Second Xiangya Hospital, Central South University, Department of Ophthalmology and Visual Sciences, Moran Eye Center, University of Utah School of Medicine, Department of Ophthalmology and Vision Science, Eye and ENT Hospital, Shanghai Medical School, Fudan University – sequence: 20 givenname: L surname: Tang fullname: Tang, L organization: Department of Ophthalmology, Second Xiangya Hospital, Central South University – sequence: 21 givenname: K surname: Zhang fullname: Zhang, K email: kangzhang@ucsd.edu organization: Department of Ophthalmology and Shiley Eye Center and Institute for Genomic Medicine, University of California, San Diego, Veterans Administration Healthcare System |
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Copyright | Royal College of Ophthalmologists 2013 Copyright Nature Publishing Group Feb 2013 Copyright © 2013 Royal College of Ophthalmologists 2013 Royal College of Ophthalmologists |
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DocumentTitleAlternate | LIPC is associated with age-related macular degeneration |
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Keywords | advanced age-related macular degeneration genetics hepatic lipase |
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308 CA Curcio (BFeye2012276_CR36) 2010; 51 DJ Cameron (BFeye2012276_CR2) 2007; 6 S Eifert (BFeye2012276_CR30) 2009; 4 I Kaur (BFeye2012276_CR11) 2010; 51 A Kanda (BFeye2012276_CR14) 2007; 104 JJ McCarthy (BFeye2012276_CR27) 2003; 114 R Reynolds (BFeye2012276_CR33) 2010; 117 JC Khan (BFeye2012276_CR3) 2006; 90 AE Fletcher (BFeye2012276_CR17) 2008; 126 S Santamarina-Fojo (BFeye2012276_CR23) 2004; 24 H Knoblauch (BFeye2012276_CR25) 2004; 13 |
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Snippet | Purpose
To determine whether there is an association between hepatic lipase (
LIPC
) and age-related macular degeneration (AMD) in two independent Caucasian... To determine whether there is an association between hepatic lipase (LIPC) and age-related macular degeneration (AMD) in two independent Caucasian cohorts. A... To determine whether there is an association between hepatic lipase (LIPC) and age-related macular degeneration (AMD) in two independent Caucasian cohorts. A... PURPOSETo determine whether there is an association between hepatic lipase (LIPC) and age-related macular degeneration (AMD) in two independent Caucasian... |
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SubjectTerms | 631/208/205 631/208/726/649 631/378/1689/1626 692/499 Aged Aged, 80 and over Alleles Cohort Studies Female Gene Frequency Genetic Predisposition to Disease Humans Laboratory Medicine Laboratory Study Lipase - genetics Macular Degeneration - genetics Male Medicine Medicine & Public Health Middle Aged Ophthalmology Pharmaceutical Sciences/Technology Polymorphism, Single Nucleotide Promoter Regions, Genetic - genetics Surgery Surgical Oncology |
Title | Association of LIPC and advanced age-related macular degeneration |
URI | https://link.springer.com/article/10.1038/eye.2012.276 https://www.ncbi.nlm.nih.gov/pubmed/23348725 https://www.proquest.com/docview/1287506692 https://search.proquest.com/docview/1288313229 https://pubmed.ncbi.nlm.nih.gov/PMC3574263 |
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