A white-box model for real-time simulation of acid-base balance in blood plasma

Maintaining an optimal acid base is important for the patient. The theory underlying acid-base balance can be challenging for clinicians and educators. These considerations justify creating simulations that include realistic changes to the partial pressure of carbon dioxide, pH, and bicarbonate ion...

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Published in:Advances in simulation (London) Vol. 8; no. 1; p. 16
Main Authors: Antonius, Timothy A J, van Meurs, Willem W L, Westerhof, Berend E, de Boode, Willem P
Format: Journal Article
Language:English
Published: England BioMed Central 15-06-2023
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Abstract Maintaining an optimal acid base is important for the patient. The theory underlying acid-base balance can be challenging for clinicians and educators. These considerations justify creating simulations that include realistic changes to the partial pressure of carbon dioxide, pH, and bicarbonate ion concentration in a range of conditions. Our explanatory simulation application requires a model that derives these variables from total carbon dioxide content and runs in real time. The presented model is derived from the Stewart model, which is based on physical and chemical principles, and takes into account the effects of weak acids and strong ions on the acid-base balance. An inventive code procedure allows for efficient computation. The simulation results match target data for a broad range of clinically and educationally relevant disturbances of the acid-base balance. The model code meets the real-time goals of the application and can be applied in other educational simulations. Python model source code is made available.
AbstractList Maintaining an optimal acid base is important for the patient. The theory underlying acid–base balance can be challenging for clinicians and educators. These considerations justify creating simulations that include realistic changes to the partial pressure of carbon dioxide, pH, and bicarbonate ion concentration in a range of conditions. Our explanatory simulation application requires a model that derives these variables from total carbon dioxide content and runs in real time. The presented model is derived from the Stewart model, which is based on physical and chemical principles, and takes into account the effects of weak acids and strong ions on the acid–base balance. An inventive code procedure allows for efficient computation. The simulation results match target data for a broad range of clinically and educationally relevant disturbances of the acid–base balance. The model code meets the real-time goals of the application and can be applied in other educational simulations. Python model source code is made available.
Abstract Maintaining an optimal acid base is important for the patient. The theory underlying acid–base balance can be challenging for clinicians and educators. These considerations justify creating simulations that include realistic changes to the partial pressure of carbon dioxide, pH, and bicarbonate ion concentration in a range of conditions. Our explanatory simulation application requires a model that derives these variables from total carbon dioxide content and runs in real time. The presented model is derived from the Stewart model, which is based on physical and chemical principles, and takes into account the effects of weak acids and strong ions on the acid–base balance. An inventive code procedure allows for efficient computation. The simulation results match target data for a broad range of clinically and educationally relevant disturbances of the acid–base balance. The model code meets the real-time goals of the application and can be applied in other educational simulations. Python model source code is made available.
ArticleNumber 16
Author Antonius, Timothy A J
van Meurs, Willem W L
de Boode, Willem P
Westerhof, Berend E
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  orcidid: 0000-0003-0289-1508
  surname: Antonius
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  email: tim.antonius@radboudumc.nl
  organization: Department of Neonatology, Radboud University Medical Center, Radboud Institute for Health Sciences, Radboudumc Amalia Children's Hospital, P.O. Box 9101, 6500 HB, Nijmegen, The Netherlands. tim.antonius@radboudumc.nl
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  givenname: Berend E
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  givenname: Willem P
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  organization: Department of Neonatology, Radboud University Medical Center, Radboud Institute for Health Sciences, Radboudumc Amalia Children's Hospital, P.O. Box 9101, 6500 HB, Nijmegen, The Netherlands
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Cites_doi 10.1615/CritRevBiomedEng.v33.i3.10
10.1007/s00421-009-1244-x
10.2307/2987937
10.1080/00365518809168181
10.1139/y83-207
10.1152/ajprenal.00195.2013
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References PA Stewart (255_CR6) 1983; 61
SE Rees (255_CR4) 2010; 108
SE Rees (255_CR3) 2005; 33
W Van Meurs (255_CR7) 2011
WL Van Meurs (255_CR8) 2018; 3
RP Brent (255_CR2) 1973
MB Wolf (255_CR9) 2013; 305
O Siggaard-Andersen (255_CR5) 1988; 48
DG Altman (255_CR1) 1983; 32
References_xml – volume: 33
  start-page: 209
  issue: 3
  year: 2005
  ident: 255_CR3
  publication-title: Crit Rev Biomed Eng
  doi: 10.1615/CritRevBiomedEng.v33.i3.10
  contributor:
    fullname: SE Rees
– volume-title: Modeling and simulation in biomedical engineering: application to cardiorespiratory physiology
  year: 2011
  ident: 255_CR7
  contributor:
    fullname: W Van Meurs
– volume: 108
  start-page: 483
  issue: 3
  year: 2010
  ident: 255_CR4
  publication-title: Eur J Appl Physiol
  doi: 10.1007/s00421-009-1244-x
  contributor:
    fullname: SE Rees
– volume: 32
  start-page: 307
  issue: 3
  year: 1983
  ident: 255_CR1
  publication-title: Statistician
  doi: 10.2307/2987937
  contributor:
    fullname: DG Altman
– volume: 48
  start-page: 7
  issue: sup189
  year: 1988
  ident: 255_CR5
  publication-title: Scand J Clin Lab Invest
  doi: 10.1080/00365518809168181
  contributor:
    fullname: O Siggaard-Andersen
– volume: 61
  start-page: 1444
  issue: 12
  year: 1983
  ident: 255_CR6
  publication-title: Can J Physiol Pharmacol
  doi: 10.1139/y83-207
  contributor:
    fullname: PA Stewart
– volume-title: Algorithms for minimization without derivatives, Englewood Cliffs
  year: 1973
  ident: 255_CR2
  contributor:
    fullname: RP Brent
– volume: 305
  start-page: F1118
  issue: 8
  year: 2013
  ident: 255_CR9
  publication-title: Am J Physiol Renal Physiol
  doi: 10.1152/ajprenal.00195.2013
  contributor:
    fullname: MB Wolf
– volume: 3
  start-page: 1
  issue: 27
  year: 2018
  ident: 255_CR8
  publication-title: Adv Simul
  contributor:
    fullname: WL Van Meurs
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Snippet Maintaining an optimal acid base is important for the patient. The theory underlying acid-base balance can be challenging for clinicians and educators. These...
Maintaining an optimal acid base is important for the patient. The theory underlying acid–base balance can be challenging for clinicians and educators. These...
Abstract Maintaining an optimal acid base is important for the patient. The theory underlying acid–base balance can be challenging for clinicians and...
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StartPage 16
SubjectTerms Acids
Bicarbonates
Blood plasma
Carbon dioxide
Education
Hydrogen
Innovation
Ion concentration
Ions
Metabolism
Partial pressure
Plasma
Potassium
Real time
Simulation
Software
Source code
Variables
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Title A white-box model for real-time simulation of acid-base balance in blood plasma
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