The impact of Beauveria species bioinocula on the soil microbial community structure in organic strawberry plantations

The multifunctionality of microorganisms, including entomopathogenic fungi, represents a feature that could be exploited to support the development, marketing, and application of microbial-based products for plant protection. However, it is likely that this feature could affect the composition and d...

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Published in:Frontiers in microbiology Vol. 13; p. 1073386
Main Authors: Canfora, Loredana, Tartanus, Małgorzata, Manfredini, Andrea, Tkaczuk, Cezary, Majchrowska-Safaryan, Anna, Malusà, Eligio
Format: Journal Article
Language:English
Published: Switzerland Frontiers Media S.A 11-01-2023
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Abstract The multifunctionality of microorganisms, including entomopathogenic fungi, represents a feature that could be exploited to support the development, marketing, and application of microbial-based products for plant protection. However, it is likely that this feature could affect the composition and dynamics of the resident soil microorganisms, possibly over a longer period. Therefore, the methodology utilized to evaluate such impact is critical for a reliable assessment. The present study was performed to evaluate the impact of strains of and on soil bacterial and fungal communities using an approach based on the terminal restriction fragment polymorphism (T-RFLP) analysis. Soil samples in the vicinity of the root system were collected during a 3-year period, before and after the bioinocula application, in two organic strawberry plantations. Specific primers were used for the amplification of the bacterial 16S rRNA gene and the fungal ITS region of the ribosome. Data of the profile analysis from T-RFLP analysis were used to compare the operational taxonomic unit (OTU) occurrence and intensity in the inoculated soil with the uninoculated control. With regard to the impact on the bacterial community, both species were not fully consistently affecting their composition across the seasons and fields tested. Nevertheless, some common patterns were pointed out in each field and, sometimes, also among them when considering the time elapsed from the bioinoculum application. The impact was even more inconsistent when analyzing the fungal community. It is thus concluded that the application of the bioinocula induced only a transient and limited effect on the soil microbial community, even though some changes in the structure dynamic and frequency of soil bacterial and fungal OTUs emerged.
AbstractList IntroductionThe multifunctionality of microorganisms, including entomopathogenic fungi, represents a feature that could be exploited to support the development, marketing, and application of microbial-based products for plant protection. However, it is likely that this feature could affect the composition and dynamics of the resident soil microorganisms, possibly over a longer period. Therefore, the methodology utilized to evaluate such impact is critical for a reliable assessment. The present study was performed to evaluate the impact of strains of Beauveria brongniartii and Beauveria bassiana on soil bacterial and fungal communities using an approach based on the terminal restriction fragment polymorphism (T-RFLP) analysis.Materials and methodsSoil samples in the vicinity of the root system were collected during a 3-year period, before and after the bioinocula application, in two organic strawberry plantations. Specific primers were used for the amplification of the bacterial 16S rRNA gene and the fungal ITS region of the ribosome.Results and discussionData of the profile analysis from T-RFLP analysis were used to compare the operational taxonomic unit (OTU) occurrence and intensity in the inoculated soil with the uninoculated control. With regard to the impact on the bacterial community, both Beauveria species were not fully consistently affecting their composition across the seasons and fields tested. Nevertheless, some common patterns were pointed out in each field and, sometimes, also among them when considering the time elapsed from the bioinoculum application. The impact was even more inconsistent when analyzing the fungal community. It is thus concluded that the application of the bioinocula induced only a transient and limited effect on the soil microbial community, even though some changes in the structure dynamic and frequency of soil bacterial and fungal OTUs emerged.
The multifunctionality of microorganisms, including entomopathogenic fungi, represents a feature that could be exploited to support the development, marketing, and application of microbial-based products for plant protection. However, it is likely that this feature could affect the composition and dynamics of the resident soil microorganisms, possibly over a longer period. Therefore, the methodology utilized to evaluate such impact is critical for a reliable assessment. The present study was performed to evaluate the impact of strains of and on soil bacterial and fungal communities using an approach based on the terminal restriction fragment polymorphism (T-RFLP) analysis. Soil samples in the vicinity of the root system were collected during a 3-year period, before and after the bioinocula application, in two organic strawberry plantations. Specific primers were used for the amplification of the bacterial 16S rRNA gene and the fungal ITS region of the ribosome. Data of the profile analysis from T-RFLP analysis were used to compare the operational taxonomic unit (OTU) occurrence and intensity in the inoculated soil with the uninoculated control. With regard to the impact on the bacterial community, both species were not fully consistently affecting their composition across the seasons and fields tested. Nevertheless, some common patterns were pointed out in each field and, sometimes, also among them when considering the time elapsed from the bioinoculum application. The impact was even more inconsistent when analyzing the fungal community. It is thus concluded that the application of the bioinocula induced only a transient and limited effect on the soil microbial community, even though some changes in the structure dynamic and frequency of soil bacterial and fungal OTUs emerged.
Author Manfredini, Andrea
Tkaczuk, Cezary
Tartanus, Małgorzata
Majchrowska-Safaryan, Anna
Canfora, Loredana
Malusà, Eligio
AuthorAffiliation 1 Centre for Agriculture and Environment (CREA-AA), Council for Agricultural Research and Economics , Rome , Italy
2 Department of Plant Protection, National Institute of Horticultural Research , Skierniewice , Poland
3 Institute of Agriculture and Horticulture, Siedlce University of Natural Sciences and Humanities , Siedlce , Poland
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CitedBy_id crossref_primary_10_3390_su16093616
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Copyright Copyright © 2023 Canfora, Tartanus, Manfredini, Tkaczuk, Majchrowska-Safaryan and Malusà.
Copyright © 2023 Canfora, Tartanus, Manfredini, Tkaczuk, Majchrowska-Safaryan and Malusà. 2023 Canfora, Tartanus, Manfredini, Tkaczuk, Majchrowska-Safaryan and Malusà
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Keywords Beauveria brongniartii
soil bacteria community
Beauveria bassiana
soil fungal community
T-RFLP
Language English
License Copyright © 2023 Canfora, Tartanus, Manfredini, Tkaczuk, Majchrowska-Safaryan and Malusà.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
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Reviewed by: Sugitha Thankappan, Karunya Institute of Technology and Sciences, India; Eustachio Tarasco, University of Bari Aldo Moro, Italy; Mirza Abdul Qayyum, Muhammad Nawaz Shareef University of Agriculture, Pakistan
Edited by: Ajar Nath Yadav, Eternal University, India
ORCID: Małgorzata Tartanus, orcid.org/0000-0001-8374-1581; Eligio Malusà, orcid.org/0000-0002-9802-3379
This article was submitted to Microbe and Virus Interactions with Plants, a section of the journal Frontiers in Microbiology
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Snippet The multifunctionality of microorganisms, including entomopathogenic fungi, represents a feature that could be exploited to support the development, marketing,...
IntroductionThe multifunctionality of microorganisms, including entomopathogenic fungi, represents a feature that could be exploited to support the...
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SubjectTerms Beauveria bassiana
Beauveria brongniartii
Microbiology
soil bacteria community
soil fungal community
T-RFLP
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Title The impact of Beauveria species bioinocula on the soil microbial community structure in organic strawberry plantations
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