A Group 6 Late Embryogenesis Abundant Protein from Common Bean Is a Disordered Protein with Extended Helical Structure and Oligomer-forming Properties

• Published in: The Journal of biological chemistry Vol. 289; no. 46; pp. 31995 - 32009
• Main Authors: Rivera-Najera, Lucero Y., Saab-Rincón, Gloria, Battaglia, Marina, Amero, Carlos, Pulido, Nancy O., García-Hernández, Enrique, Solórzano, Rosa M., Reyes, José L., Covarrubias, Alejandra A.
• Format: Journal Article
• Language: English
• Published: United States Elsevier Inc 14-11-2014; American Society for Biochemistry and Molecular Biology
• Subjects: Amino Acid Sequence; Calorimetry; Chromatography, Gel; Circular Dichroism; Cross-Linking Reagents - chemistry; Fluorometry; Magnetic Resonance Spectroscopy; Mass Spectrometry; Molecular Sequence Data; Osmolar Concentration; Phaseolus - chemistry; Plant Proteins - chemistry; Protein Binding; Protein Structure and Folding; Protein Structure, Secondary; Recombinant Proteins - chemistry; Sequence Homology, Amino Acid; Water - chemistry; Plant Biology; Protein Self-assembly; Stress Response; Protein Conformation; Isothermal Titration Calorimetry (ITC); Protein Structure; Intrinsically Disordered Protein
• ISSN: 0021-9258; 1083-351X
• DOI: 10.1074/jbc.M114.583369

Late embryogenesis-abundant proteins accumulate to high levels in dry seeds. Some of them also accumulate in response to water deficit in vegetative tissues, which leads to a remarkable association between their presence and low water availability conditions. A major sub-group of these proteins, also known as typical LEA proteins, shows high hydrophilicity and a high percentage of glycine and other small amino acid residues, distinctive physicochemical properties that predict a high content of structural disorder. Although all typical LEA proteins share these characteristics, seven groups can be distinguished by sequence similarity, indicating structural and functional diversity among them. Some of these groups have been extensively studied; however, others require a more detailed analysis to advance in their functional understanding. In this work, we report the structural characterization of a group 6 LEA protein from a common bean (Phaseolus vulgaris L.) (PvLEA6) by circular dichroism and nuclear magnetic resonance showing that it is a disordered protein in aqueous solution. Using the same techniques, we show that despite its unstructured nature, the addition of trifluoroethanol exhibited an intrinsic potential in this protein to gain helicity. This property was also promoted by high osmotic potentials or molecular crowding. Furthermore, we demonstrate that PvLEA6 protein is able to form soluble homo-oligomeric complexes that also show high levels of structural disorder. The association between PvLEA6 monomers to form dimers was shown to occur in plant cells by bimolecular fluorescence complementation, pointing to the in vivo functional relevance of this association.