Metabolic Engineering through Cofactor Manipulation and Its Effects on Metabolic Flux Redistribution in Escherichia coli
Applications of genetic engineering or metabolic engineering have increased in both academic and industrial institutions. Most current metabolic engineering studies have focused on enzyme levels and on the effect of the amplification, addition, or deletion of a particular pathway. Although it is gen...
Saved in:
Published in: | Metabolic engineering Vol. 4; no. 2; pp. 182 - 192 |
---|---|
Main Authors: | , , , , , , , , |
Format: | Journal Article |
Language: | English |
Published: |
Belgium
Elsevier Inc
01-04-2002
|
Subjects: | |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Abstract | Applications of genetic engineering or metabolic engineering have increased in both academic and industrial institutions. Most current metabolic engineering studies have focused on enzyme levels and on the effect of the amplification, addition, or deletion of a particular pathway. Although it is generally known that cofactors play a major role in the production of different fermentation products, their role has not been thoroughly and systematically studied. It is conceivable that in cofactor-dependent production systems, cofactor availability and the proportion of cofactor in the active form may play an important role in dictating the overall process yield. Hence, the manipulation of these cofactor levels may be crucial in order to further increase production. We have demonstrated that manipulation of cofactors can be achieved by external and genetic means and these manipulations have the potential to be used as an additional tool to achieve desired metabolic goals. We have shown experimentally that the NADH/NAD+ ratio can be altered by using carbon sources with different oxidation states. We have shown further that the metabolite distribution can be influenced by a change in the NADH/NAD+ ratio as mediated by the oxidation state of the carbon source used. We have also demonstrated that the total NAD(H/+) levels can be increased by the overexpression of the pncB gene. The increase in the total NAD(H/+) levels can be achieved even in a complex medium, which is commonly used by most industrial processes. Finally, we have shown that manipulation of the CoA pool/flux can be used to increase the productivity of a model product, isoamyl acetate. |
---|---|
AbstractList | Applications of genetic engineering or metabolic engineering have increased in both academic and industrial institutions. Most current metabolic engineering studies have focused on enzyme levels and on the effect of the amplification, addition, or deletion of a particular pathway. Although it is generally known that cofactors play a major role in the production of different fermentation products, their role has not been thoroughly and systematically studied. It is conceivable that in cofactor-dependent production systems, cofactor availability and the proportion of cofactor in the active form may play an important role in dictating the overall process yield. Hence, the manipulation of these cofactor levels may be crucial in order to further increase production. We have demonstrated that manipulation of cofactors can be achieved by external and genetic means and these manipulations have the potential to be used as an additional tool to achieve desired metabolic goals. We have shown experimentally that the NADH/NAD(+) ratio can be altered by using carbon sources with different oxidation states. We have shown further that the metabolite distribution can be influenced by a change in the NADH/NAD(+) ratio as mediated by the oxidation state of the carbon source used. We have also demonstrated that the total NAD(H/(+)) levels can be increased by the overexpression of the pncB gene. The increase in the total NAD(H/(+)) levels can be achieved even in a complex medium, which is commonly used by most industrial processes. Finally, we have shown that manipulation of the CoA pool/flux can be used to increase the productivity of a model product, isoamyl acetate. Applications of genetic engineering or metabolic engineering have increased in both academic and industrial institutions. Most current metabolic engineering studies have focused on enzyme levels and on the effect of the amplification, addition, or deletion of a particular pathway. Although it is generally known that cofactors play a major role in the production of different fermentation products, their role has not been thoroughly and systematically studied. It is conceivable that in cofactor-dependent production systems, cofactor availability and the proportion of cofactor in the active form may play an important role in dictating the overall process yield. Hence, the manipulation of these cofactor levels may be crucial in order to further increase production. We have demonstrated that manipulation of cofactors can be achieved by external and genetic means and these manipulations have the potential to be used as an additional tool to achieve desired metabolic goals. We have shown experimentally that the NADH/NAD super(+) ratio can be altered by using carbon sources with different oxidation states. We have shown further that the metabolite distribution can be influenced by a change in the NADH/NAD super(+) ratio as mediated by the oxidation state of the carbon source used. We have also demonstrated that the total NAD(H/ super(+)) levels can be increased by the overexpression of the pncB gene. The increase in the total NAD(H/ super(+)) levels can be achieved even in a complex medium, which is commonly used by most industrial processes. Finally, we have shown that manipulation of the CoA pool/flux can be used to increase the productivity of a model product, isoamyl acetate. |
Author | Berrı́os-Rivera, Susana J. Bennett, George N. Blackwood, Kimathi San, Ka-Yiu Yang, Yea-Tyng Vadali, Ravi V. Sariyar, Berna Horton, Emily Rudolph, Fred B. |
Author_xml | – sequence: 1 givenname: Ka-Yiu surname: San fullname: San, Ka-Yiu organization: Department of Bioengineering, Rice University, Houston, Texas, 77005 – sequence: 2 givenname: George N. surname: Bennett fullname: Bennett, George N. organization: Department of Biochemistry and Cell Biology, Institute of Biosciences and Bioengineering, Rice University, Houston, Texas, 77005 – sequence: 3 givenname: Susana J. surname: Berrı́os-Rivera fullname: Berrı́os-Rivera, Susana J. organization: Department of Chemical Engineering, Rice University, Houston, Texas, 77005 – sequence: 4 givenname: Ravi V. surname: Vadali fullname: Vadali, Ravi V. organization: Department of Bioengineering, Rice University, Houston, Texas, 77005 – sequence: 5 givenname: Yea-Tyng surname: Yang fullname: Yang, Yea-Tyng organization: Department of Biochemistry and Cell Biology, Institute of Biosciences and Bioengineering, Rice University, Houston, Texas, 77005 – sequence: 6 givenname: Emily surname: Horton fullname: Horton, Emily organization: Department of Biochemistry and Cell Biology, Institute of Biosciences and Bioengineering, Rice University, Houston, Texas, 77005 – sequence: 7 givenname: Fred B. surname: Rudolph fullname: Rudolph, Fred B. organization: Department of Biochemistry and Cell Biology, Institute of Biosciences and Bioengineering, Rice University, Houston, Texas, 77005 – sequence: 8 givenname: Berna surname: Sariyar fullname: Sariyar, Berna organization: Department of Bioengineering, Rice University, Houston, Texas, 77005 – sequence: 9 givenname: Kimathi surname: Blackwood fullname: Blackwood, Kimathi organization: Department of Biochemistry and Cell Biology, Institute of Biosciences and Bioengineering, Rice University, Houston, Texas, 77005 |
BackLink | https://www.ncbi.nlm.nih.gov/pubmed/12009797$$D View this record in MEDLINE/PubMed |
BookMark | eNqFkU1rGzEURUVJaGK32y6LVt3ZeRqPR9KyGLsxJARCuxb6eGOrjCVXminOv68cm3hVsnpCnHsX94zIVYgBCfnCYMoAmrudwTCtANgUqgo-kFsGsplwJuqrtzdvbsgo59-FYnPJPpIbVhKSS35LDo_YaxM7b-kybHxATD5saL9Ncdhs6SK22vYx0Ucd_H7odO9joDo4uu4zXbYt2nLL16Vm1Q0H-ozO5z55M7wGfKDLbLel2269praAn8h1q7uMn893TH6tlj8X95OHpx_rxfeHia1nvJ_UTIg5NAxaYMaCEULU2s4sNsY4J8E42zrbzGspBQJnc6YroQXUVes0GjMbk2-n3n2KfwbMvdr5bLHrdMA4ZMVZIwE4fxdkoqnlrBYFnJ5Am2LOCVu1T36n04tioI5S1FGKOkpRRykl8PXcPJgdugt-tlAAcQKwDPHXY1LZegy2jJjKwMpF_7_uf8HrnuE |
CitedBy_id | crossref_primary_10_1007_s13213_015_1172_4 crossref_primary_10_1007_s12257_017_0061_z crossref_primary_10_1021_acscatal_6b03579 crossref_primary_10_1002_jobm_201100580 crossref_primary_10_1016_j_jbiotec_2005_02_006 crossref_primary_10_1016_j_jbiotec_2006_04_014 crossref_primary_10_1021_acssynbio_7b00390 crossref_primary_10_1007_s00284_010_9683_5 crossref_primary_10_1007_s10295_010_0851_1 crossref_primary_10_1016_j_scitotenv_2018_12_280 crossref_primary_10_1007_s00253_016_7383_1 crossref_primary_10_1007_s12010_019_03175_y crossref_primary_10_1016_j_meteno_2016_01_003 crossref_primary_10_1016_j_ymben_2006_07_007 crossref_primary_10_1016_j_ymben_2005_08_003 crossref_primary_10_1016_j_ymben_2004_06_002 crossref_primary_10_1016_j_biotechadv_2017_09_008 crossref_primary_10_1371_journal_pone_0130840 crossref_primary_10_1016_j_watres_2018_10_052 crossref_primary_10_1016_j_biortech_2022_128051 crossref_primary_10_1016_j_enzmictec_2015_08_011 crossref_primary_10_1016_j_enzmictec_2017_07_010 crossref_primary_10_1007_s00449_007_0159_3 crossref_primary_10_1007_s12010_015_1700_5 crossref_primary_10_1186_s12896_016_0272_y crossref_primary_10_1371_journal_pone_0102951 crossref_primary_10_1002_bit_24897 crossref_primary_10_1002_bit_25623 crossref_primary_10_1016_j_bioeng_2006_02_003 crossref_primary_10_1016_j_biotechadv_2013_02_001 crossref_primary_10_1007_s11356_020_07679_7 crossref_primary_10_1128_JB_00505_07 crossref_primary_10_1016_j_jece_2021_106086 crossref_primary_10_1186_1475_2859_6_31 crossref_primary_10_1016_j_jsb_2020_107657 crossref_primary_10_1038_s42255_022_00601_0 crossref_primary_10_1016_j_meteno_2016_06_002 crossref_primary_10_1128_JB_00152_18 crossref_primary_10_1038_nbt0704_823 crossref_primary_10_1016_j_ymben_2011_09_006 crossref_primary_10_1128_JB_01065_13 crossref_primary_10_1002_adsc_201900849 crossref_primary_10_1111_mmi_12566 crossref_primary_10_1007_s00284_019_01681_0 crossref_primary_10_1016_j_ymben_2004_02_006 crossref_primary_10_1016_j_ymben_2008_09_001 crossref_primary_10_1002_elsc_201900045 crossref_primary_10_1016_j_biortech_2013_06_031 crossref_primary_10_4161_bbug_1_4_12103 crossref_primary_10_1002_biot_200900279 crossref_primary_10_1007_s10295_004_0149_2 crossref_primary_10_1016_j_biortech_2012_10_012 crossref_primary_10_1007_s10295_005_0206_5 crossref_primary_10_3389_fbioe_2022_844517 crossref_primary_10_1007_s00253_017_8106_y crossref_primary_10_1073_pnas_1721545115 crossref_primary_10_2139_ssrn_4160653 crossref_primary_10_1186_s12934_018_1036_2 crossref_primary_10_1016_j_procbio_2010_03_001 crossref_primary_10_1016_j_jcou_2021_101589 crossref_primary_10_1016_j_biortech_2014_12_091 crossref_primary_10_1111_j_1365_2958_2010_07099_x crossref_primary_10_1128_AEM_01546_07 crossref_primary_10_1021_acssynbio_9b00402 crossref_primary_10_1186_1754_6834_6_7 crossref_primary_10_1016_j_enzmictec_2014_03_003 crossref_primary_10_1016_j_enzmictec_2017_03_005 crossref_primary_10_1016_j_ymben_2006_06_002 crossref_primary_10_1042_BST20150141 crossref_primary_10_7717_peerj_3244 crossref_primary_10_1128_JB_00031_18 crossref_primary_10_1007_s12010_017_2581_6 crossref_primary_10_1128_AEM_02067_10 crossref_primary_10_1002_biot_201400577 crossref_primary_10_1016_j_ijhydene_2012_08_017 crossref_primary_10_1016_j_soilbio_2019_03_024 crossref_primary_10_1128_JB_02273_12 crossref_primary_10_1007_s00253_013_4910_1 crossref_primary_10_1016_j_enzmictec_2013_12_011 crossref_primary_10_1016_j_watres_2024_121506 crossref_primary_10_1074_jbc_M110_160960 crossref_primary_10_1002_yea_2902 crossref_primary_10_1016_j_bej_2015_09_013 crossref_primary_10_1111_j_1751_7915_2011_00310_x crossref_primary_10_1002_btpr_559 crossref_primary_10_1074_jbc_M111_302588 crossref_primary_10_1080_09542299_2016_1212675 crossref_primary_10_1128_JB_00797_19 crossref_primary_10_1074_jbc_M406796200 crossref_primary_10_1007_s00449_022_02779_9 crossref_primary_10_1007_s12010_011_9373_1 crossref_primary_10_1038_srep27748 crossref_primary_10_1007_s00253_007_1039_0 crossref_primary_10_1002_yea_1745 crossref_primary_10_1016_j_ymben_2014_06_009 crossref_primary_10_1186_s13568_019_0874_6 crossref_primary_10_1186_s12929_022_00885_0 crossref_primary_10_1007_s12275_020_0261_7 crossref_primary_10_1007_s12010_015_1932_4 crossref_primary_10_1016_j_cej_2015_05_005 crossref_primary_10_1016_j_biortech_2010_09_048 crossref_primary_10_1016_j_enzmictec_2012_07_011 crossref_primary_10_1074_jbc_M708845200 crossref_primary_10_1038_s42255_021_00453_0 crossref_primary_10_1007_s12010_014_0945_8 crossref_primary_10_1007_s10295_017_1986_0 crossref_primary_10_1016_j_jbiosc_2018_05_019 crossref_primary_10_1002_biot_200700055 crossref_primary_10_1186_s13068_017_0938_2 crossref_primary_10_1007_s10529_009_0097_z crossref_primary_10_1016_j_ymben_2014_11_008 crossref_primary_10_1142_S0219720013430063 crossref_primary_10_1186_1475_2859_8_54 crossref_primary_10_1021_ol402269k crossref_primary_10_3390_fermentation9010015 crossref_primary_10_1007_s10295_018_2072_y crossref_primary_10_1128_AEM_00630_11 crossref_primary_10_3390_ijms24010218 crossref_primary_10_1007_s10295_018_2068_7 crossref_primary_10_1128_AEM_00692_17 crossref_primary_10_1093_nar_gkx530 crossref_primary_10_1007_s00253_021_11512_7 crossref_primary_10_1016_j_jbiosc_2011_11_021 crossref_primary_10_1016_j_resmic_2005_04_008 crossref_primary_10_1007_s13213_015_1103_4 crossref_primary_10_1039_C5RA26885K crossref_primary_10_1007_s00449_023_02871_8 crossref_primary_10_1016_j_ymben_2014_02_002 crossref_primary_10_1128_AEM_02706_09 crossref_primary_10_1038_s41598_022_16599_0 crossref_primary_10_1002_bit_28055 crossref_primary_10_1007_s11274_010_0644_8 crossref_primary_10_1002_elsc_200720203 crossref_primary_10_1016_j_ymben_2013_05_006 crossref_primary_10_1186_s13068_019_1415_x crossref_primary_10_1016_j_mimet_2013_02_006 crossref_primary_10_1016_j_ymben_2018_09_007 crossref_primary_10_1007_s10295_015_1663_0 crossref_primary_10_1371_journal_pone_0076149 crossref_primary_10_1186_s12934_017_0786_6 crossref_primary_10_1016_j_scitotenv_2018_01_315 crossref_primary_10_1016_j_ymben_2016_10_020 crossref_primary_10_1038_s41467_018_07878_4 crossref_primary_10_1016_j_bios_2013_12_058 crossref_primary_10_1007_s00253_007_0987_8 crossref_primary_10_1016_j_biortech_2014_06_044 crossref_primary_10_1016_j_ymben_2011_07_001 crossref_primary_10_1016_j_ymben_2013_07_005 crossref_primary_10_1007_s10529_013_1262_y crossref_primary_10_1016_j_ymben_2005_12_003 crossref_primary_10_1371_journal_pone_0036296 crossref_primary_10_1093_femsyr_foz028 crossref_primary_10_1080_07388551_2023_2270702 crossref_primary_10_1371_journal_pone_0010069 crossref_primary_10_1016_j_biortech_2015_11_067 crossref_primary_10_1038_srep26228 crossref_primary_10_1007_s00253_011_3536_4 crossref_primary_10_1186_s13068_020_01831_8 crossref_primary_10_3390_catal13050815 crossref_primary_10_1016_j_elecom_2012_03_002 crossref_primary_10_1007_s00253_004_1609_3 crossref_primary_10_1128_msphere_00061_24 crossref_primary_10_1016_j_jbiotec_2007_05_034 crossref_primary_10_1007_s00253_012_4605_z crossref_primary_10_1016_j_ymben_2021_01_012 crossref_primary_10_1016_j_biotechadv_2019_06_006 crossref_primary_10_1007_s10295_014_1560_y crossref_primary_10_1016_j_ymben_2022_08_003 crossref_primary_10_1038_srep15824 crossref_primary_10_1016_j_mycres_2008_03_004 crossref_primary_10_1016_j_biortech_2023_130202 crossref_primary_10_1186_s12934_017_0728_3 crossref_primary_10_1007_s10295_007_0244_2 crossref_primary_10_1074_jbc_M800694200 crossref_primary_10_1371_journal_pgen_1009081 crossref_primary_10_3389_fmicb_2020_00003 crossref_primary_10_1002_cppb_20115 crossref_primary_10_1128_AAC_49_2_708_720_2005 crossref_primary_10_1016_j_ymben_2015_01_003 crossref_primary_10_1111_j_1472_765X_2011_03013_x crossref_primary_10_1016_j_ces_2012_09_006 crossref_primary_10_1186_1475_2859_10_76 crossref_primary_10_1016_j_biortech_2013_08_115 crossref_primary_10_1016_j_ymben_2014_10_004 crossref_primary_10_1371_journal_pgen_1006800 crossref_primary_10_1002_cbic_202100697 crossref_primary_10_1111_mmi_12702 crossref_primary_10_1016_j_jes_2024_04_021 crossref_primary_10_1111_j_1365_2958_2008_06365_x crossref_primary_10_1016_j_bej_2012_06_006 crossref_primary_10_1016_j_sbi_2011_05_001 crossref_primary_10_1016_j_biortech_2013_12_089 crossref_primary_10_1016_j_biortech_2016_06_071 crossref_primary_10_1016_j_jhazmat_2019_121376 crossref_primary_10_1111_mmi_12018 crossref_primary_10_1002_btpr_716 crossref_primary_10_1021_acssynbio_1c00502 |
Cites_doi | 10.1128/JB.182.3.620-626.2000 10.1128/jb.169.12.5795-5800.1987 10.1016/S0958-1669(97)80098-5 10.1006/mben.2002.0229 10.1016/S0021-9258(18)38215-2 10.1128/JB.181.8.2403-2410.1999 10.1128/jb.171.11.6213-6217.1989 10.1016/0003-2697(73)90094-8 10.1002/(SICI)1097-0290(19991105)65:3<291::AID-BIT6>3.0.CO;2-F 10.1128/jb.172.8.4187-4196.1990 10.1093/oxfordjournals.jbchem.a133597 10.1002/(SICI)1097-0290(19990620)63:6<737::AID-BIT12>3.0.CO;2-9 10.1146/annurev.mi.38.100184.000405 10.1006/mben.1999.0141 10.1128/JB.180.15.3804-3808.1998 10.1007/s002030050635 10.1074/jbc.275.2.1377 10.1126/science.2047876 10.1002/(SICI)1097-0061(19990330)15:5<409::AID-YEA366>3.0.CO;2-Q 10.1128/jb.178.20.6013-6018.1996 10.1007/BF01023351 |
ContentType | Journal Article |
Copyright | 2002 Elsevier Science (USA) |
Copyright_xml | – notice: 2002 Elsevier Science (USA) |
DBID | CGR CUY CVF ECM EIF NPM AAYXX CITATION 7QL 7QO 8FD C1K FR3 P64 7X8 |
DOI | 10.1006/mben.2001.0220 |
DatabaseName | Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed CrossRef Bacteriology Abstracts (Microbiology B) Biotechnology Research Abstracts Technology Research Database Environmental Sciences and Pollution Management Engineering Research Database Biotechnology and BioEngineering Abstracts MEDLINE - Academic |
DatabaseTitle | MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) CrossRef Engineering Research Database Biotechnology Research Abstracts Technology Research Database Bacteriology Abstracts (Microbiology B) Biotechnology and BioEngineering Abstracts Environmental Sciences and Pollution Management MEDLINE - Academic |
DatabaseTitleList | MEDLINE Engineering Research Database |
Database_xml | – sequence: 1 dbid: ECM name: MEDLINE url: https://search.ebscohost.com/login.aspx?direct=true&db=cmedm&site=ehost-live sourceTypes: Index Database |
DeliveryMethod | fulltext_linktorsrc |
Discipline | Engineering Biology |
EISSN | 1096-7184 |
EndPage | 192 |
ExternalDocumentID | 10_1006_mben_2001_0220 12009797 S1096717601902204 |
Genre | Research Support, U.S. Gov't, Non-P.H.S Research Support, Non-U.S. Gov't Journal Article |
GroupedDBID | --- --K --M .~1 0R~ 123 1B1 1RT 1~. 1~5 29M 4.4 457 4G. 53G 5VS 7-5 71M 8P~ AAAJQ AACTN AAEDT AAEDW AAIAV AAIKJ AAKOC AALRI AAOAW AAQFI AAQXK AARKO AAXUO ABFNM ABGSF ABJNI ABMAC ABNUV ABUDA ABXDB ABYKQ ACDAQ ACGFS ACRLP ADBBV ADEWK ADEZE ADFGL ADMUD ADUVX AEBSH AEHWI AEKER AENEX AFKWA AFTJW AFXIZ AGEKW AGHFR AGRDE AGUBO AGYEJ AHPOS AIEXJ AIKHN AITUG AJBFU AJOXV AKURH ALMA_UNASSIGNED_HOLDINGS AMFUW AMRAJ ASPBG AVWKF AXJTR AZFZN BKOJK BLXMC CAG CJTIS COF CS3 DM4 DOVZS DU5 EBS EFBJH EFLBG EJD ENUVR EO8 EO9 EP2 EP3 F5P FDB FEDTE FGOYB FIRID FNPLU FYGXN G-Q GBLVA HVGLF HZ~ IHE J1W KOM LG5 LUGTX M41 MO0 N9A O-L O9- OAUVE OZT P-8 P-9 P2P PC. Q38 R2- RIG ROL RPZ SDF SDG SDP SES SEW SPC SPCBC SSG SSI SSU SSZ T5K UHS XPP ZMT ZU3 ~G- AAHBH AAXKI AFJKZ AKRWK CGR CUY CVF ECM EIF NPM AAYXX CITATION 7QL 7QO 8FD C1K FR3 P64 7X8 |
ID | FETCH-LOGICAL-c437t-418850610f01bc0b8884ac3ce6bbdd90bdcfdc654998e07151a28a8042fdaebb3 |
ISSN | 1096-7176 |
IngestDate | Sat Oct 26 00:28:28 EDT 2024 Fri Oct 25 23:17:31 EDT 2024 Thu Sep 26 16:19:53 EDT 2024 Sat Sep 28 07:50:34 EDT 2024 Fri Feb 23 02:14:29 EST 2024 |
IsPeerReviewed | true |
IsScholarly | true |
Issue | 2 |
Language | English |
LinkModel | OpenURL |
MergedId | FETCHMERGED-LOGICAL-c437t-418850610f01bc0b8884ac3ce6bbdd90bdcfdc654998e07151a28a8042fdaebb3 |
Notes | ObjectType-Article-2 SourceType-Scholarly Journals-1 ObjectType-Feature-1 content type line 23 ObjectType-Article-1 ObjectType-Feature-2 |
PMID | 12009797 |
PQID | 18649348 |
PQPubID | 23462 |
PageCount | 11 |
ParticipantIDs | proquest_miscellaneous_71690077 proquest_miscellaneous_18649348 crossref_primary_10_1006_mben_2001_0220 pubmed_primary_12009797 elsevier_sciencedirect_doi_10_1006_mben_2001_0220 |
PublicationCentury | 2000 |
PublicationDate | 2002-04-01 |
PublicationDateYYYYMMDD | 2002-04-01 |
PublicationDate_xml | – month: 04 year: 2002 text: 2002-04-01 day: 01 |
PublicationDecade | 2000 |
PublicationPlace | Belgium |
PublicationPlace_xml | – name: Belgium |
PublicationTitle | Metabolic engineering |
PublicationTitleAlternate | Metab Eng |
PublicationYear | 2002 |
Publisher | Elsevier Inc |
Publisher_xml | – name: Elsevier Inc |
References | Berrı́os-Rivera, S. J, Lu, B, Yang, Y.-T, San, K.-Y, and, Bennett, G. N. 1999, The effect of NADH recycling on the NADH/NAD Lee, Papoutsakis (RF13) 1999 Berrı́os-Rivera, S. J, San, K.-Y, and, Bennett, G. N. 2001, The effect of NAPRTase overexpression on the total levels of NAD, the NADH/NAD Tolentino, Meng, Bennett, San (RF22) 1992; 14 Wubbolts, Terpstra, Beilen, Kingma, Meesters, Witholt (RF24) 1990; 265 Yoshimoto, Fujiwara, Momma, Tanaka, Sone, Nagasawa, Tamai (RF26) 1999; 15 Ferguson, Tötemeyer, MacLean, Booth (RF10) 1998; 170 Lopez, Kleerebezem, de Vos, Hugenholz (RF15) 1998; 180 Rock, Calder, Karim, Jackowski (RF18) 2000; 275 ratio, and the distribution of metabolites in Leonardo, Dailly, Clark (RF14) 1996; 178 Yang, Bennett, San (RF25) 1999; 65 Bernofsky, Swan (RF4) 1973; 53 Submitted for publication. ratio and metabolic flux redistribution in Bailey (RF3) 1991; 252 Foster, Park, Penfound, Fenger, Spector (RF11) 1990; 172 Alam, Clark (RF1) 1989; 171 Vallari, Rock (RF23) 1987; 169 Berrı́os-Rivera, Yang, San, Bennett (RF7) 2000; 2 Riondet, Cachon, Wache, Alcaraz, Divies (RF17) 2000; 182 Cooper (RF9) 1984; 38 Park, Zeikus (RF16) 1999; 181 Stephanopoulos, Aristidou, Nielson (RF19) 1998 1999 AIChE Annual Meeting, Dallas, TX. Stephanopoulos, Vallino (RF20) 1990; 252 Aristidou, Bennett, San (RF2) 1999; 63 Cameron, Chaplen (RF8) 1997; 8 Izui, Taguchi, Morikawa, Katsuki (RF12) 1981; 90 Terada, Murata, Izui (RF21) 1991; 109 Bailey (10.1006/mben.2001.0220_RF3) 1991; 252 Stephanopoulos (10.1006/mben.2001.0220_RF20) 1990; 252 Vallari (10.1006/mben.2001.0220_RF23) 1987; 169 Lee (10.1006/mben.2001.0220_RF13) 1999 Izui (10.1006/mben.2001.0220_RF12) 1981; 90 Ferguson (10.1006/mben.2001.0220_RF10) 1998; 170 Stephanopoulos (10.1006/mben.2001.0220_RF19) 1998 Park (10.1006/mben.2001.0220_RF16) 1999; 181 Rock (10.1006/mben.2001.0220_RF18) 2000; 275 Yang (10.1006/mben.2001.0220_RF25) 1999; 65 Wubbolts (10.1006/mben.2001.0220_RF24) 1990; 265 10.1006/mben.2001.0220_RF6 10.1006/mben.2001.0220_RF5 Leonardo (10.1006/mben.2001.0220_RF14) 1996; 178 Lopez (10.1006/mben.2001.0220_RF15) 1998; 180 Riondet (10.1006/mben.2001.0220_RF17) 2000; 182 Yoshimoto (10.1006/mben.2001.0220_RF26) 1999; 15 Bernofsky (10.1006/mben.2001.0220_RF4) 1973; 53 Berrı́os-Rivera (10.1006/mben.2001.0220_RF7) 2000; 2 Aristidou (10.1006/mben.2001.0220_RF2) 1999; 63 Foster (10.1006/mben.2001.0220_RF11) 1990; 172 Cameron (10.1006/mben.2001.0220_RF8) 1997; 8 Cooper (10.1006/mben.2001.0220_RF9) 1984; 38 Terada (10.1006/mben.2001.0220_RF21) 1991; 109 Tolentino (10.1006/mben.2001.0220_RF22) 1992; 14 Alam (10.1006/mben.2001.0220_RF1) 1989; 171 |
References_xml | – year: 1999 ident: RF13 publication-title: Metabolic Engineering contributor: fullname: Papoutsakis – volume: 181 start-page: 2403 year: 1999 end-page: 24109 ident: RF16 article-title: Utilization of electrically reduced neutral red by Actinobacillus succinogenes: Physiological function of neutral red in membrane-driven fumarate reduction and energy conservation publication-title: J. Bacteriol. contributor: fullname: Zeikus – volume: 14 start-page: 157 year: 1992 end-page: 162 ident: RF22 article-title: A pH-regulated promoter for the expression of recombinant proteins in publication-title: Biotechnol. Lett. contributor: fullname: San – volume: 65 start-page: 291 year: 1999 end-page: 297 ident: RF25 article-title: The interactions of publication-title: Biotechnol. Bioeng. contributor: fullname: San – volume: 252 start-page: 675 year: 1990 end-page: 1681 ident: RF20 article-title: Network rigidity and metabolic engineering in metabolite overproduction publication-title: Science contributor: fullname: Vallino – volume: 169 start-page: 5795 year: 1987 end-page: 5800 ident: RF23 article-title: Isolation and characterization of temperature-sensitive pantothenate kinase ( publication-title: J. Bacteriol. contributor: fullname: Rock – volume: 180 start-page: 3804 year: 1998 end-page: 3808 ident: RF15 article-title: Cofactor engineering: A novel approach to metabolic engineering in publication-title: J. Bacteriol. contributor: fullname: Hugenholz – volume: 63 start-page: 737 year: 1999 end-page: 749 ident: RF2 article-title: Metabolic flux analysis of publication-title: Biotechnol. Bioeng. contributor: fullname: San – volume: 182 start-page: 620 year: 2000 end-page: 626 ident: RF17 article-title: Extracellular oxidoreduction potential modifies carbon and electron flow in publication-title: J. Bacteriol. contributor: fullname: Divies – volume: 15 start-page: 409 year: 1999 end-page: 417 ident: RF26 article-title: Isolation and characterization of the ATF2 gene encoding alcohol acetyltransferase II in the bottom fermenting yeast publication-title: Yeast contributor: fullname: Tamai – volume: 171 start-page: 6213 year: 1989 end-page: 6217 ident: RF1 article-title: Anaerobic fermentation balance of publication-title: J. Bacteriol. contributor: fullname: Clark – year: 1998 ident: RF19 publication-title: Metabolic Engineering contributor: fullname: Nielson – volume: 265 start-page: 17665 year: 1990 end-page: 17672 ident: RF24 article-title: Variation of cofactor levels in publication-title: J. Biol. Chem. contributor: fullname: Witholt – volume: 275 start-page: 1377 year: 2000 end-page: 1384 ident: RF18 article-title: Pantothenate kinase regulation of the intracellular concentration of coenzyme A publication-title: J. Biol. Chem. contributor: fullname: Jackowski – volume: 53 start-page: 452 year: 1973 end-page: 458 ident: RF4 article-title: An improved cycling assay for nicotinamide adenine dinucleotide publication-title: Anal. Biochem. contributor: fullname: Swan – volume: 178 start-page: 6013 year: 1996 end-page: 6018 ident: RF14 article-title: Role of NAD in regulating the publication-title: J. Bacteriol. contributor: fullname: Clark – volume: 109 start-page: 49 year: 1991 end-page: 54 ident: RF21 article-title: Site-directed mutagenesis of phosphoenolpyruvate carboxylase from publication-title: J. Biochem. contributor: fullname: Izui – volume: 172 start-page: 4187 year: 1990 end-page: 4196 ident: RF11 article-title: Regulation of NAD metabolism in publication-title: J. Bacteriol. contributor: fullname: Spector – volume: 8 start-page: 175 year: 1997 end-page: 180 ident: RF8 article-title: Development in metabolic engineering publication-title: Curr. Opin. Biotechnol. contributor: fullname: Chaplen – volume: 252 start-page: 1668 year: 1991 end-page: 1675 ident: RF3 article-title: Toward a science of metabolic engineering publication-title: Science contributor: fullname: Bailey – volume: 90 start-page: 1321 year: 1981 end-page: 1331 ident: RF12 article-title: Regulation of publication-title: J. Biochem. contributor: fullname: Katsuki – volume: 170 start-page: 209 year: 1998 end-page: 219 ident: RF10 article-title: Methylglyoxal production in bacteria: Suicide or survival? publication-title: Arch. Microbiol. contributor: fullname: Booth – volume: 38 start-page: 49 year: 1984 end-page: 68 ident: RF9 article-title: Metabolism of methylglyoxal in microorganisms publication-title: Annu. Rev. Microbiol. contributor: fullname: Cooper – volume: 2 start-page: 149 year: 2000 end-page: 154 ident: RF7 article-title: Effect of glucose analog supplementation on metabolic flux distribution in anaerobic chemostat cultures of publication-title: Metab. Eng. contributor: fullname: Bennett – volume: 182 start-page: 620 year: 2000 ident: 10.1006/mben.2001.0220_RF17 article-title: Extracellular oxidoreduction potential modifies carbon and electron flow in Escherichia coli publication-title: J. Bacteriol. doi: 10.1128/JB.182.3.620-626.2000 contributor: fullname: Riondet – volume: 169 start-page: 5795 year: 1987 ident: 10.1006/mben.2001.0220_RF23 article-title: Isolation and characterization of temperature-sensitive pantothenate kinase (coaA) mutants of Escherichia coli publication-title: J. Bacteriol. doi: 10.1128/jb.169.12.5795-5800.1987 contributor: fullname: Vallari – volume: 8 start-page: 175 year: 1997 ident: 10.1006/mben.2001.0220_RF8 article-title: Development in metabolic engineering publication-title: Curr. Opin. Biotechnol. doi: 10.1016/S0958-1669(97)80098-5 contributor: fullname: Cameron – ident: 10.1006/mben.2001.0220_RF6 doi: 10.1006/mben.2002.0229 – volume: 265 start-page: 17665 year: 1990 ident: 10.1006/mben.2001.0220_RF24 article-title: Variation of cofactor levels in Escherichia coli publication-title: J. Biol. Chem. doi: 10.1016/S0021-9258(18)38215-2 contributor: fullname: Wubbolts – year: 1999 ident: 10.1006/mben.2001.0220_RF13 contributor: fullname: Lee – volume: 181 start-page: 2403 year: 1999 ident: 10.1006/mben.2001.0220_RF16 article-title: Utilization of electrically reduced neutral red by Actinobacillus succinogenes: Physiological function of neutral red in membrane-driven fumarate reduction and energy conservation publication-title: J. Bacteriol. doi: 10.1128/JB.181.8.2403-2410.1999 contributor: fullname: Park – volume: 171 start-page: 6213 year: 1989 ident: 10.1006/mben.2001.0220_RF1 article-title: Anaerobic fermentation balance of Escherichia coli as observed by in vivo nuclear magnetic resonance spectroscopy publication-title: J. Bacteriol. doi: 10.1128/jb.171.11.6213-6217.1989 contributor: fullname: Alam – volume: 53 start-page: 452 year: 1973 ident: 10.1006/mben.2001.0220_RF4 article-title: An improved cycling assay for nicotinamide adenine dinucleotide publication-title: Anal. Biochem. doi: 10.1016/0003-2697(73)90094-8 contributor: fullname: Bernofsky – volume: 65 start-page: 291 year: 1999 ident: 10.1006/mben.2001.0220_RF25 article-title: The interactions of nuo and ack/pta mutations on metabolic flux redistribution in Escherichia coli publication-title: Biotechnol. Bioeng. doi: 10.1002/(SICI)1097-0290(19991105)65:3<291::AID-BIT6>3.0.CO;2-F contributor: fullname: Yang – volume: 172 start-page: 4187 year: 1990 ident: 10.1006/mben.2001.0220_RF11 article-title: Regulation of NAD metabolism in Salmonella typhimurium: Molecular sequence analysis of the bifunctional nadR regulator and the nadA–pnuC operon publication-title: J. Bacteriol. doi: 10.1128/jb.172.8.4187-4196.1990 contributor: fullname: Foster – volume: 90 start-page: 1321 year: 1981 ident: 10.1006/mben.2001.0220_RF12 article-title: Regulation of Escherichia coli phosphoenolpyruvate carboxylase by multiple effectors in vivo. II. Kinetic studies with a reaction system containing physiological concentrations of ligands publication-title: J. Biochem. doi: 10.1093/oxfordjournals.jbchem.a133597 contributor: fullname: Izui – volume: 63 start-page: 737 year: 1999 ident: 10.1006/mben.2001.0220_RF2 article-title: Metabolic flux analysis of Escherichia coli expressing the Bacillus subtilis acetolactate synthase in batch and continuous cultures publication-title: Biotechnol. Bioeng. doi: 10.1002/(SICI)1097-0290(19990620)63:6<737::AID-BIT12>3.0.CO;2-9 contributor: fullname: Aristidou – volume: 38 start-page: 49 year: 1984 ident: 10.1006/mben.2001.0220_RF9 article-title: Metabolism of methylglyoxal in microorganisms publication-title: Annu. Rev. Microbiol. doi: 10.1146/annurev.mi.38.100184.000405 contributor: fullname: Cooper – ident: 10.1006/mben.2001.0220_RF5 – volume: 2 start-page: 149 year: 2000 ident: 10.1006/mben.2001.0220_RF7 article-title: Effect of glucose analog supplementation on metabolic flux distribution in anaerobic chemostat cultures of Escherichia coli publication-title: Metab. Eng. doi: 10.1006/mben.1999.0141 contributor: fullname: Berrı́os-Rivera – volume: 180 start-page: 3804 year: 1998 ident: 10.1006/mben.2001.0220_RF15 article-title: Cofactor engineering: A novel approach to metabolic engineering in Lactococcus lactis by controlled expression of NADH oxidase publication-title: J. Bacteriol. doi: 10.1128/JB.180.15.3804-3808.1998 contributor: fullname: Lopez – volume: 170 start-page: 209 year: 1998 ident: 10.1006/mben.2001.0220_RF10 article-title: Methylglyoxal production in bacteria: Suicide or survival? publication-title: Arch. Microbiol. doi: 10.1007/s002030050635 contributor: fullname: Ferguson – volume: 275 start-page: 1377 year: 2000 ident: 10.1006/mben.2001.0220_RF18 article-title: Pantothenate kinase regulation of the intracellular concentration of coenzyme A publication-title: J. Biol. Chem. doi: 10.1074/jbc.275.2.1377 contributor: fullname: Rock – volume: 252 start-page: 675 year: 1990 ident: 10.1006/mben.2001.0220_RF20 article-title: Network rigidity and metabolic engineering in metabolite overproduction publication-title: Science contributor: fullname: Stephanopoulos – volume: 252 start-page: 1668 year: 1991 ident: 10.1006/mben.2001.0220_RF3 article-title: Toward a science of metabolic engineering publication-title: Science doi: 10.1126/science.2047876 contributor: fullname: Bailey – volume: 15 start-page: 409 year: 1999 ident: 10.1006/mben.2001.0220_RF26 article-title: Isolation and characterization of the ATF2 gene encoding alcohol acetyltransferase II in the bottom fermenting yeast Saccharomyces pastorianus publication-title: Yeast doi: 10.1002/(SICI)1097-0061(19990330)15:5<409::AID-YEA366>3.0.CO;2-Q contributor: fullname: Yoshimoto – volume: 178 start-page: 6013 year: 1996 ident: 10.1006/mben.2001.0220_RF14 article-title: Role of NAD in regulating the adhE gene of Escherichia coli publication-title: J. Bacteriol. doi: 10.1128/jb.178.20.6013-6018.1996 contributor: fullname: Leonardo – volume: 14 start-page: 157 year: 1992 ident: 10.1006/mben.2001.0220_RF22 article-title: A pH-regulated promoter for the expression of recombinant proteins in Escherichia coli publication-title: Biotechnol. Lett. doi: 10.1007/BF01023351 contributor: fullname: Tolentino – year: 1998 ident: 10.1006/mben.2001.0220_RF19 contributor: fullname: Stephanopoulos – volume: 109 start-page: 49 year: 1991 ident: 10.1006/mben.2001.0220_RF21 article-title: Site-directed mutagenesis of phosphoenolpyruvate carboxylase from E. coli: The role of His579 in the catalytic and regulatory functions publication-title: J. Biochem. contributor: fullname: Terada |
SSID | ssj0011591 |
Score | 2.1854753 |
Snippet | Applications of genetic engineering or metabolic engineering have increased in both academic and industrial institutions. Most current metabolic engineering... |
SourceID | proquest crossref pubmed elsevier |
SourceType | Aggregation Database Index Database Publisher |
StartPage | 182 |
SubjectTerms | Acetyl Coenzyme A - metabolism Biomedical Engineering Bioreactors Carbon - metabolism Escherichia coli - genetics Escherichia coli - metabolism Genes, Bacterial Genetic Engineering Models, Biological NAD - metabolism Pentosyltransferases - genetics Pentosyltransferases - metabolism |
Title | Metabolic Engineering through Cofactor Manipulation and Its Effects on Metabolic Flux Redistribution in Escherichia coli |
URI | https://dx.doi.org/10.1006/mben.2001.0220 https://www.ncbi.nlm.nih.gov/pubmed/12009797 https://search.proquest.com/docview/18649348 https://search.proquest.com/docview/71690077 |
Volume | 4 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://sdu.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1Lb9QwELa2rZDoAUF5dHn6AOKwcokTJ3GOZUkFRfTQlqqcIjt2pEiwi_aByr9nJo6TrNBKgMQlWnmdxNrvW3tmPP6GkJewBugyLlMWVzJjwijDNFeWxUJnaIEnumpKJ1ykZ9fyXS7y0chLJfZt_xVpaAOs8eTsX6DdPRQa4DNgDldAHa5_hPsnuwJcUbp6IDXYleOZzl2BHUx7qX3pLpcTvFpOcp_cgRs4_jEnX9c3gIJBhd22OBYGSfIlwl1jqvQEyFQPrdz-ZtuPoYvluJDrR8W-1OsuGtAcD1r1UfrJ2VH_3WKBNu9b_mo6Bct3vmTnmE2iuqwiNTntel8po9yR73P1o55cHW3ENcJBOkwTbPMHbjbyQTl4XAw80FY9e9jmKs35SV0MuBsOJmjuSh21az13dfh-W0ZgKgKcv2nbKOSiqmsY9Atml8Z4ga_G0eCBfOgidsheCBMezLd7xx_y69NuPwuMxsb198P38qFB8mbzLdvMo23uT2MGXd4ld1r_hR474t0jIzs7ILdcRdOfB2R_QLr75KYjAh2005aM1JORDslIgYwUyEhbMlJo6h-DZKSbZKT1jA7ISJGMD8jnk_xy-p61pT5YKaJ0xQSXKJ3Igyrgugy0lFKoMiptorUxWaBNWZkywWCGtGAVx1yFUklYcSqjrNbRQ7I7m8_sIaFCB5lSIQe_xKD2kYzDQMeRBdtXGRHJMXntf-Hiu1N0KZx2d1IgFliYlReIxZhwD0DR2qPOziyAJ1vveeGRKmCixt03NbPz9bLgMhFZJOT2HihchfJaY_LIQdyPD_cw0yx9_A8jekJu93-vp2R3tVjbZ2RnadbPW5b-AtcCyoI |
link.rule.ids | 315,782,786,27933,27934 |
linkProvider | Elsevier |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Metabolic+Engineering+through+Cofactor+Manipulation+and+Its+Effects+on+Metabolic+Flux+Redistribution+in+Escherichia+coli&rft.jtitle=Metabolic+engineering&rft.au=San%2C+Ka-Yiu&rft.au=Bennett%2C+George+N.&rft.au=Berr%C4%B1%CC%81os-Rivera%2C+Susana+J.&rft.au=Vadali%2C+Ravi+V.&rft.date=2002-04-01&rft.pub=Elsevier+Inc&rft.issn=1096-7176&rft.eissn=1096-7184&rft.volume=4&rft.issue=2&rft.spage=182&rft.epage=192&rft_id=info:doi/10.1006%2Fmben.2001.0220&rft.externalDocID=S1096717601902204 |
thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=1096-7176&client=summon |
thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=1096-7176&client=summon |
thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=1096-7176&client=summon |