Association between NOGGIN and SPRY2 polymorphisms and nonsyndromic cleft lip with or without cleft palate

Nonsyndromic cleft lip with or without cleft palate (NSCLP) is a common congenital malformation with a worldwide prevalence rate of 0.4–2.0% among live births, depending on race and ethnic background. Single‐nucleotide polymorphisms (SNPs) of genes may contribute to NSCLP risk, although the risk fac...

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Published in:American journal of medical genetics. Part A Vol. 167A; no. 1; pp. 137 - 141
Main Authors: Song, Tao, Shi, Jinna, Guo, Qiang, Lv, Kewen, Jiao, Xiaohui, Hu, Tenglong, Sun, Xiangyu, Fu, Songbin
Format: Journal Article
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Published: United States Blackwell Publishing Ltd 01-01-2015
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Abstract Nonsyndromic cleft lip with or without cleft palate (NSCLP) is a common congenital malformation with a worldwide prevalence rate of 0.4–2.0% among live births, depending on race and ethnic background. Single‐nucleotide polymorphisms (SNPs) of genes may contribute to NSCLP risk, although the risk factors and pathogenesis of NSCLP remain unknown. The objective of this study was to investigate association of SNPs of noggin (NOG) and sprouty homolog 2 (SPRY2) with NSCLP risk. A total of 188 NSCLP patients and 228 healthy controls from northern China were recruited for genotyping of these SNPs using the SNaP shot method. The frequency of the NOG rs227731 genotype was significantly lower among NSCLP cases than among controls. Logistic regression analysis showed rs227731 CC genotype was associated with decreased NSCLP susceptibility (OR = 0.31, 95% CI = 0.12–0.80) compared to the AA homozygote. However, no association between SPRY2, SNPs, and NSCLP risk were observed in this cohort of patients. In conclusion, NOG rs227731 genotype was associated with decreased NSCLP risk in a Northern Chinese population. © 2014 Wiley Periodicals, Inc.
AbstractList Nonsyndromic cleft lip with or without cleft palate (NSCLP) is a common congenital malformation with a worldwide prevalence rate of 0.4–2.0% among live births, depending on race and ethnic background. Single‐nucleotide polymorphisms (SNPs) of genes may contribute to NSCLP risk, although the risk factors and pathogenesis of NSCLP remain unknown. The objective of this study was to investigate association of SNPs of noggin (NOG) and sprouty homolog 2 (SPRY2) with NSCLP risk. A total of 188 NSCLP patients and 228 healthy controls from northern China were recruited for genotyping of these SNPs using the SNaP shot method. The frequency of the NOG rs227731 genotype was significantly lower among NSCLP cases than among controls. Logistic regression analysis showed rs227731 CC genotype was associated with decreased NSCLP susceptibility (OR = 0.31, 95% CI = 0.12–0.80) compared to the AA homozygote. However, no association between SPRY2, SNPs, and NSCLP risk were observed in this cohort of patients. In conclusion, NOG rs227731 genotype was associated with decreased NSCLP risk in a Northern Chinese population. © 2014 Wiley Periodicals, Inc.
Nonsyndromic cleft lip with or without cleft palate (NSCLP) is a common congenital malformation with a worldwide prevalence rate of 0.4-2.0% among live births, depending on race and ethnic background. Single-nucleotide polymorphisms (SNPs) of genes may contribute to NSCLP risk, although the risk factors and pathogenesis of NSCLP remain unknown. The objective of this study was to investigate association of SNPs of noggin (NOG) and sprouty homolog 2 (SPRY2) with NSCLP risk. A total of 188 NSCLP patients and 228 healthy controls from northern China were recruited for genotyping of these SNPs using the SNaP shot method. The frequency of the NOG rs227731 genotype was significantly lower among NSCLP cases than among controls. Logistic regression analysis showed rs227731 CC genotype was associated with decreased NSCLP susceptibility (OR=0.31, 95% CI=0.12-0.80) compared to the AA homozygote. However, no association between SPRY2, SNPs, and NSCLP risk were observed in this cohort of patients. In conclusion, NOG rs227731 genotype was associated with decreased NSCLP risk in a Northern Chinese population. copyright 2014 Wiley Periodicals, Inc.
Nonsyndromic cleft lip with or without cleft palate (NSCLP) is a common congenital malformation with a worldwide prevalence rate of 0.4-2.0% among live births, depending on race and ethnic background. Single-nucleotide polymorphisms (SNPs) of genes may contribute to NSCLP risk, although the risk factors and pathogenesis of NSCLP remain unknown. The objective of this study was to investigate association of SNPs of noggin (NOG) and sprouty homolog 2 (SPRY2) with NSCLP risk. A total of 188 NSCLP patients and 228 healthy controls from northern China were recruited for genotyping of these SNPs using the SNaP shot method. The frequency of the NOG rs227731 genotype was significantly lower among NSCLP cases than among controls. Logistic regression analysis showed rs227731 CC genotype was associated with decreased NSCLP susceptibility (OR = 0.31, 95% CI = 0.12-0.80) compared to the AA homozygote. However, no association between SPRY2, SNPs, and NSCLP risk were observed in this cohort of patients. In conclusion, NOG rs227731 genotype was associated with decreased NSCLP risk in a Northern Chinese population.
Author Fu, Songbin
Lv, Kewen
Shi, Jinna
Hu, Tenglong
Sun, Xiangyu
Guo, Qiang
Song, Tao
Jiao, Xiaohui
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Keywords SNPs
SPRY2
NOG
Nonsyndromic cleft lip with or without cleft palate (NSCLP)
Language English
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Snippet Nonsyndromic cleft lip with or without cleft palate (NSCLP) is a common congenital malformation with a worldwide prevalence rate of 0.4–2.0% among live births,...
Nonsyndromic cleft lip with or without cleft palate (NSCLP) is a common congenital malformation with a worldwide prevalence rate of 0.4-2.0% among live births,...
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SubjectTerms Adolescent
Adult
Alleles
Carrier Proteins - genetics
Case-Control Studies
Child
Child, Preschool
Cleft Lip - complications
Cleft Lip - genetics
Cleft Palate - complications
Cleft Palate - genetics
Female
Genetic Association Studies
Genetic Predisposition to Disease
Haplotypes
Humans
Infant
Intracellular Signaling Peptides and Proteins - genetics
Male
Membrane Proteins - genetics
NOG
Nonsyndromic cleft lip with or without cleft palate (NSCLP)
Odds Ratio
Polymorphism, Single Nucleotide - genetics
SNPs
SPRY2
Young Adult
Title Association between NOGGIN and SPRY2 polymorphisms and nonsyndromic cleft lip with or without cleft palate
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https://www.proquest.com/docview/1638889925
https://search.proquest.com/docview/1639978338
https://search.proquest.com/docview/1647010009
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