Arcobacter lanthieri sp. nov., isolated from pig and dairy cattle manure

A study was undertaken to determine the prevalence and diversity of species of the genus Arcobacter in pig and dairy cattle manure, which led to the identification of strains AF1440T, AF1430 and AF1581. Initially identified as Arcobacter butzleri based on colony morphology and initial PCR-confirmati...

Full description

Saved in:

Bibliographic Details
Published in:	International journal of systematic and evolutionary microbiology Vol. 65; no. 8; pp. 2709 - 2716
Main Authors:	Whiteduck-Léveillée, Kerri, Whiteduck-Léveillée, Jenni, Cloutier, Michel, Tambong, James T, Xu, Renlin, Topp, Edward, Arts, Michael T, Chao, Jerry, Adam, Zaky, André Lévesque, C, Lapen, David R, Villemur, Richard, Talbot, Guylaine, Khan, Izhar U H
Format:	Journal Article
Language:	English
Published:	England Microbiology Society 01-08-2015
Subjects:	Animals Arcobacter Arcobacter - classification Arcobacter - genetics Arcobacter - isolation & purification Bacteriology Base Composition Cattle DNA, Bacterial DNA, Bacterial - genetics Fatty Acids Fatty Acids - chemistry Genes, Bacterial Life Sciences Manure Manure - microbiology Microbiology and Parasitology Molecular Sequence Data Nucleic Acid Hybridization Ontario Phylogeny Polymerase Chain Reaction RNA, Ribosomal, 16S RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Swine
Online Access:	Get full text
Tags:	Add Tag No Tags, Be the first to tag this record!

Abstract	A study was undertaken to determine the prevalence and diversity of species of the genus Arcobacter in pig and dairy cattle manure, which led to the identification of strains AF1440T, AF1430 and AF1581. Initially identified as Arcobacter butzleri based on colony morphology and initial PCR-confirmation tests, analyses of 16S rRNA gene sequences of these strains confirmed that they belonged to the genus Arcobacter and were different from all known species of the genus. The isolates formed a distinct group within the genus Arcobacter based on their 16S rRNA, gyrB, rpoB, cpn60, gyrA and atpA gene sequences and fatty acid profiles. Their unique species status was further supported by physiological properties and DNA-DNA hybridization that allowed phenotypic and genotypic differentiation of the strains from other species of the genus Arcobacter. The isolates were found to be oxidase, catalase and esterase positive and urease negative; they grew well at 30 °C under microaerophilic conditions and produced nitrite and acetoin. Based on their common origin and various physiological properties, it is proposed that the isolates are classified as members of a novel species with the name Arcobacter lanthieri sp. nov. The type strain is AF1440T ( = LMG 28516T = CCUG 66485T); strains AF1430 ( = LMG 28515 = CCUG 66486) and AF1581 ( = LMG 28517 = CCUG 66487) are reference strains.
AbstractList	A study was undertaken to determine the prevalence and diversity of species of the genus Arcobacter in pig and dairy cattle manure, which led to the identification of strains AF1440T, AF1430 and AF1581. Initially identified as Arcobacter butzleri based on colony morphology and initial PCR-confirmation tests, analyses of 16S rRNA gene sequences of these strains confirmed that they belonged to the genus Arcobacter and were different from all known species of the genus. The isolates formed a distinct group within the genus Arcobacter based on their 16S rRNA, gyrB, rpoB, cpn60, gyrA and atpA gene sequences and fatty acid profiles. Their unique species status was further supported by physiological properties and DNA-DNA hybridization that allowed phenotypic and genotypic differentiation of the strains from other species of the genus Arcobacter. The isolates were found to be oxidase, catalase and esterase positive and urease negative; they grew well at 30 °C under microaerophilic conditions and produced nitrite and acetoin. Based on their common origin and various physiological properties, it is proposed that the isolates are classified as members of a novel species with the name Arcobacter lanthieri sp. nov. The type strain is AF1440T ( = LMG 28516T = CCUG 66485T); strains AF1430 ( = LMG 28515 = CCUG 66486) and AF1581 ( = LMG 28517 = CCUG 66487) are reference strains. A study was undertaken to determine the prevalence and diversity of species of the genus Arcobacter in pig and dairy cattle manure, which led to the identification of strains AF1440 T , AF1430 and AF1581. Initially identified as Arcobacter butzleri based on colony morphology and initial PCR-confirmation tests, analyses of 16S rRNA gene sequences of these strains confirmed that they belonged to the genus Arcobacter and were different from all known species of the genus. The isolates formed a distinct group within the genus Arcobacter based on their 16S rRNA, gyrB , rpoB , cpn60 , gyrA and atpA gene sequences and fatty acid profiles. Their unique species status was further supported by physiological properties and DNA–DNA hybridization that allowed phenotypic and genotypic differentiation of the strains from other species of the genus Arcobacter . The isolates were found to be oxidase, catalase and esterase positive and urease negative; they grew well at 30 °C under microaerophilic conditions and produced nitrite and acetoin. Based on their common origin and various physiological properties, it is proposed that the isolates are classified as members of a novel species with the name Arcobacter lanthieri sp. nov. The type strain is AF1440 T ( = LMG 28516 T = CCUG 66485 T ); strains AF1430 ( = LMG 28515 = CCUG 66486) and AF1581 ( = LMG 28517 = CCUG 66487) are reference strains.
Author	Whiteduck-Léveillée, Kerri Tambong, James T Adam, Zaky Villemur, Richard Chao, Jerry Talbot, Guylaine Lapen, David R Cloutier, Michel Arts, Michael T Topp, Edward Xu, Renlin Whiteduck-Léveillée, Jenni Khan, Izhar U H André Lévesque, C
Author_xml	– sequence: 1 givenname: Kerri surname: Whiteduck-Léveillée fullname: Whiteduck-Léveillée, Kerri organization: Eastern Cereal and Oilseed Research Centre (ECORC), Agriculture and Agri-Food Canada, Ottawa, ON, Canada – sequence: 2 givenname: Jenni surname: Whiteduck-Léveillée fullname: Whiteduck-Léveillée, Jenni organization: Eastern Cereal and Oilseed Research Centre (ECORC), Agriculture and Agri-Food Canada, Ottawa, ON, Canada – sequence: 3 givenname: Michel surname: Cloutier fullname: Cloutier, Michel organization: Eastern Cereal and Oilseed Research Centre (ECORC), Agriculture and Agri-Food Canada, Ottawa, ON, Canada – sequence: 4 givenname: James T surname: Tambong fullname: Tambong, James T organization: Eastern Cereal and Oilseed Research Centre (ECORC), Agriculture and Agri-Food Canada, Ottawa, ON, Canada – sequence: 5 givenname: Renlin surname: Xu fullname: Xu, Renlin organization: Eastern Cereal and Oilseed Research Centre (ECORC), Agriculture and Agri-Food Canada, Ottawa, ON, Canada – sequence: 6 givenname: Edward surname: Topp fullname: Topp, Edward organization: Southern Crop Protection and Food Research Centre (SCPFRC), Agriculture and Agri-Food Canada, London, ON, Canada – sequence: 7 givenname: Michael T surname: Arts fullname: Arts, Michael T organization: Department of Chemistry and Biology, Ryerson University, Toronto, ON, Canada – sequence: 8 givenname: Jerry surname: Chao fullname: Chao, Jerry organization: Ontario Ministry of the Environment, Toronto, ON, Canada – sequence: 9 givenname: Zaky surname: Adam fullname: Adam, Zaky organization: Eastern Cereal and Oilseed Research Centre (ECORC), Agriculture and Agri-Food Canada, Ottawa, ON, Canada – sequence: 10 givenname: C surname: André Lévesque fullname: André Lévesque, C organization: Eastern Cereal and Oilseed Research Centre (ECORC), Agriculture and Agri-Food Canada, Ottawa, ON, Canada – sequence: 11 givenname: David R surname: Lapen fullname: Lapen, David R organization: Eastern Cereal and Oilseed Research Centre (ECORC), Agriculture and Agri-Food Canada, Ottawa, ON, Canada – sequence: 12 givenname: Richard surname: Villemur fullname: Villemur, Richard organization: INRS-Institute Armand-Frappier Research Centre, Laval, QC, Canada – sequence: 13 givenname: Guylaine surname: Talbot fullname: Talbot, Guylaine organization: Dairy and Swine Research Development Centre, Agriculture and Agri-Food Canada, Sherbrooke, QC, Canada – sequence: 14 givenname: Izhar U H surname: Khan fullname: Khan, Izhar U H organization: Eastern Cereal and Oilseed Research Centre (ECORC), Agriculture and Agri-Food Canada, Ottawa, ON, Canada
BackLink	https://www.ncbi.nlm.nih.gov/pubmed/25977280$$D View this record in MEDLINE/PubMed https://riip.hal.science/pasteur-01352693$$DView record in HAL
BookMark	eNo9kE1r3DAQQEVJyPet56JjDmtn9GVZxyUk3cBCLs1ZjGW5UbAtR7ID-fd12HRPMwyPB_MuyckYR0_ITwYlA2PuwlsuoQQAweof5ILJqioUCHly3Hl1Ti5zfgNYDwBn5JwrozWv4YLstsnFBt3sE-1xnF-DT4HmqaRj_Cg3NOTY4-xb2qU40Cn8pTi2tMWQPqnDee49HXBckr8mpx322d98zyvy8vjw535X7J9_P91v94WTQsxF2-kGjVLotDZc1b5TUgKrNGKlFdNcc--Er41DxRspdS2Fdh2TXWMQNBdXpDh4X7G3UwoDpk8bMdjddm8nzLNfkgUmFK-M-GArf3vgpxTfF59nO4TsfL8-6-OSLdNghNGq-lJvDqhLMefku6Ofgf1qbdfWFuyh9Yr_-jYvzeDbI_w_rvgHjuJ52g
CitedBy_id	crossref_primary_10_1186_s12866_018_1357_7 crossref_primary_10_1016_j_fm_2015_12_010 crossref_primary_10_1016_j_ijfoodmicro_2016_05_018 crossref_primary_10_1002_mbo3_890 crossref_primary_10_4315_JFP_20_056 crossref_primary_10_3390_w14081266 crossref_primary_10_1016_j_ram_2015_12_003 crossref_primary_10_1099_ijsem_0_003101 crossref_primary_10_3389_fmicb_2019_02253 crossref_primary_10_1099_ijsem_0_002255 crossref_primary_10_1016_j_scitotenv_2019_07_310 crossref_primary_10_1016_j_mimet_2015_12_017 crossref_primary_10_1186_s13099_023_00588_3 crossref_primary_10_1186_s12866_020_01826_3 crossref_primary_10_1111_jam_13597 crossref_primary_10_1016_j_syapm_2020_126091 crossref_primary_10_1099_ijsem_0_001809 crossref_primary_10_1186_s12864_022_08663_w crossref_primary_10_17221_273_2015_VETMED crossref_primary_10_1111_jam_14926 crossref_primary_10_1099_ijsem_0_002662 crossref_primary_10_3390_microorganisms11051313 crossref_primary_10_1186_s12866_023_03119_x crossref_primary_10_1016_j_fm_2017_02_011 crossref_primary_10_1264_jsme2_ME18052 crossref_primary_10_1016_j_foodcont_2021_108139 crossref_primary_10_1016_j_syapm_2015_12_002 crossref_primary_10_1099_ijsem_0_005113 crossref_primary_10_1111_lam_13281 crossref_primary_10_1128_MRA_01307_18 crossref_primary_10_3390_antibiotics10070823 crossref_primary_10_1080_01652176_2017_1323355 crossref_primary_10_3389_fmicb_2018_02077 crossref_primary_10_1016_j_fm_2019_103403 crossref_primary_10_1099_ijsem_0_002080 crossref_primary_10_1371_journal_pone_0180493
Cites_doi	10.1016/S0168-1605(01)00605-5 10.1111/j.1472-765X.1996.tb00074.x 10.1128/AEM.08009-11 10.1111/j.1462-2920.2004.00624.x 10.1007/0-387-29298-5_283 10.1099/ijs.0.02483-0 10.1099/ijs.0.006650-0 10.1099/00207713-44-4-846 10.1016/S0378-1135(02)00312-7 10.1007/BF02101990 10.1016/j.syapm.2010.10.001 10.1139/W10-093 10.1111/j.1574-6968.2000.tb09407.x 10.1007/s12088-007-0022-x 10.2307/2412407 10.1128/genomeA.00377-14 10.1128/AEM.58.10.3413-3416.1992 10.1099/00207713-41-1-88 10.1111/j.1423-0410.2011.01550.x 10.1073/pnas.0906412106 10.1038/nmeth.2089 10.1099/ijs.0.64109-0 10.1016/j.mimet.2006.09.020 10.1099/ijs.0.007740-0 10.1128/AEM.68.5.2172-2178.2002 10.1007/BF01734359 10.1099/ijs.0.054155-0 10.1128/AEM.72.4.2691-2706.2006 10.1007/978-1-349-09857-6 10.1016/j.syapm.2014.10.011 10.1099/jmm.0.46282-0 10.1093/molbev/msr121 10.1016/j.mimet.2010.01.009 10.1099/ijs.0.63103-0 10.1093/nar/25.17.3389 10.1099/00207713-37-4-463 10.1099/ijs.0.025668-0 10.1016/j.vetmic.2004.11.002 10.1016/S0163-4453(95)80031-X 10.1111/j.1365-2672.2008.04133.x 10.1128/JCM.43.5.2256-2260.2005 10.1016/j.vetmic.2006.03.004
ContentType	Journal Article
Copyright	Distributed under a Creative Commons Attribution 4.0 International License
Copyright_xml	– notice: Distributed under a Creative Commons Attribution 4.0 International License
DBID	CGR CUY CVF ECM EIF NPM AAYXX CITATION 7X8 1XC
DOI	10.1099/ijs.0.000318
DatabaseName	Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed CrossRef MEDLINE - Academic Hyper Article en Ligne (HAL)
DatabaseTitle	MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) CrossRef MEDLINE - Academic
DatabaseTitleList	MEDLINE CrossRef
Database_xml	– sequence: 1 dbid: ECM name: MEDLINE url: https://search.ebscohost.com/login.aspx?direct=true&db=cmedm&site=ehost-live sourceTypes: Index Database
DeliveryMethod	fulltext_linktorsrc
Discipline	Biology
EISSN	1466-5034
EndPage	2716
ExternalDocumentID	oai_HAL_pasteur_01352693v1 10_1099_ijs_0_000318 25977280
Genre	Research Support, Non-U.S. Gov't Journal Article
GroupedDBID	--- -~X .GJ 18M 2WC 34G 39C 4.4 53G 5GY ABDNZ ABEFU ACBNA ACGFO ACPEE ACYGS ADBBV ADCDP AEILP AENEX AGCDD AI. AJKYU ALMA_UNASSIGNED_HOLDINGS AMEGR BAWUL C1A CGR CS3 CUY CVF DIK DU5 E3Z EBS ECM EIF EJD F5P FRP GX1 H13 L7B NPM OHT OK1 P0W P2P RGM TR2 VH1 W8F WH7 WOQ Y6R YSK ZCG ~02 ~KM AAYXX CITATION 7X8 1XC
ID	FETCH-LOGICAL-c433t-df7ba955ac779258ef5440167aa67517272ec3e89ca52b4478437cf14fb9a0723
ISSN	1466-5026
IngestDate	Thu Oct 10 06:43:27 EDT 2024 Fri Oct 25 03:16:12 EDT 2024 Thu Nov 21 21:11:08 EST 2024 Wed Oct 16 00:45:09 EDT 2024
IsDoiOpenAccess	false
IsOpenAccess	true
IsPeerReviewed	true
IsScholarly	true
Issue	8
Language	English
License	Distributed under a Creative Commons Attribution 4.0 International License: http://creativecommons.org/licenses/by/4.0
LinkModel	OpenURL
MergedId	FETCHMERGED-LOGICAL-c433t-df7ba955ac779258ef5440167aa67517272ec3e89ca52b4478437cf14fb9a0723
Notes	ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23
OpenAccessLink	https://doi.org/10.1099/ijs.0.000318
PMID	25977280
PQID	1709397562
PQPubID	23479
PageCount	8
ParticipantIDs	hal_primary_oai_HAL_pasteur_01352693v1 proquest_miscellaneous_1709397562 crossref_primary_10_1099_ijs_0_000318 pubmed_primary_25977280
PublicationCentury	2000
PublicationDate	2015-Aug 2015-08-01 20150801 2015-08
PublicationDateYYYYMMDD	2015-08-01
PublicationDate_xml	– month: 08 year: 2015 text: 2015-Aug
PublicationDecade	2010
PublicationPlace	England
PublicationPlace_xml	– name: England
PublicationTitle	International journal of systematic and evolutionary microbiology
PublicationTitleAlternate	Int J Syst Evol Microbiol
PublicationYear	2015
Publisher	Microbiology Society
Publisher_xml	– name: Microbiology Society
References	Douidah (ijs000318-Douidah1) 2010; 80 Greco-Stewart (ijs000318-Greco-Stewart1) 2012; 102 Schneider (ijs000318-Schneider1) 2012; 9 Vandamme (ijs000318-Vandamme12) 2005; vol. 2C Kim (ijs000318-Kim1) 2010; 60 Van den Bulck (ijs000318-Van1) 2005; 43 Wayne (ijs000318-Wayne1) 1987; 37 Collado (ijs000318-Collado1) 2011; 61 Harmon (ijs000318-Harmon1) 1996; 23 Houf (ijs000318-Houf12345) 2005; 55 Hayat (ijs000318-Hayat1) 1989 Richter (ijs000318-Richter1) 2009; 106 Hill (ijs000318-Hill1) 2006; 55 (ijs000318-CLSI1) 2010 Sasi Jyothsna (ijs000318-Sasi1) 2013; 63 Tambong (ijs000318-Tambong1) 2006; 72 Saitou (ijs000318-Saitou1) 1987; 4 Lee (ijs000318-Lee1) 2012; 78 Stackebrandt (ijs000318-Stackebrandt1) 1994; 44 Houf (ijs000318-Houf12) 2000; 193 Fera (ijs000318-Fera1) 2009; 106 Prakash (ijs000318-Prakash1) 2007; 47 Korczak (ijs000318-Korczak1) 2006; 56 Kabeya (ijs000318-Kabeya1) 2003; 93 Altschul (ijs000318-Altschul1) 1997; 25 Levican (ijs000318-Levican1) 2015; 38 Houf (ijs000318-Houf1) 2007; 68 Kluge (ijs000318-Kluge1) 1969; 18 Lanave (ijs000318-Lanave1) 1984; 20 Ho (ijs000318-Ho1) 2006; 115 Felsenstein (ijs000318-Felsenstein1) 1981; 17 Houf (ijs000318-Houf123) 2001; 71 Van Driessche (ijs000318-Van12) 2005; 105 Tamura (ijs000318-Tamura1) 2011; 28 Chao (ijs000318-Chao1) 2010; 56 (ijs000318-CLSI12) 2011 Teeling (ijs000318-Teeling1) 2004; 6 Houf (ijs000318-Houf6) 2009; 59 Bruce (ijs000318-Bruce1) 1992; 58 Ramisse (ijs000318-Ramisse1) 2003; 53 On (ijs000318-On1) 1995; 31 Figueras (ijs000318-Figueras1) 2011; 34 Houf (ijs000318-Houf1234) 2002; 68 Vandamme (ijs000318-Vandamme1) 1991; 41 Adam (ijs000318-Adam1) 2014; 2
References_xml	– volume: 4 start-page: 406 year: 1987 ident: ijs000318-Saitou1 article-title: The neighbor-joining method: a new method for reconstructing phylogenetic trees publication-title: Mol Biol Evol contributor: fullname: Saitou – volume: 71 start-page: 189 year: 2001 ident: ijs000318-Houf123 article-title: Development of a new protocol for the isolation and quantification of Arcobacter species from poultry products publication-title: Int J Food Microbiol doi: 10.1016/S0168-1605(01)00605-5 contributor: fullname: Houf – volume: 23 start-page: 241 year: 1996 ident: ijs000318-Harmon1 article-title: Identification of Arcobacter isolates by PCR publication-title: Lett Appl Microbiol doi: 10.1111/j.1472-765X.1996.tb00074.x contributor: fullname: Harmon – volume-title: Performance standards for antimicrobial susceptibility testing year: 2011 ident: ijs000318-CLSI12 – volume: 78 start-page: 5511 year: 2012 ident: ijs000318-Lee1 article-title: Arcobacter in Lake Erie beach waters: an emerging gastrointestinal pathogen linked with human-associated fecal contamination publication-title: Appl Environ Microbiol doi: 10.1128/AEM.08009-11 contributor: fullname: Lee – volume: 6 start-page: 938 year: 2004 ident: ijs000318-Teeling1 article-title: Application of tetranucleotide frequencies for the assignment of genomic fragments publication-title: Environ Microbiol doi: 10.1111/j.1462-2920.2004.00624.x contributor: fullname: Teeling – volume: vol. 2C start-page: 1161 volume-title: In Bergey's Manual of Systematic Bacteriology year: 2005 ident: ijs000318-Vandamme12 article-title: Genus II. Arcobacter Vandamme, Falsen, Rossau, Segers, Tytgat and De Ley 1991a, 99VP doi: 10.1007/0-387-29298-5_283 contributor: fullname: Vandamme – volume: 53 start-page: 739 year: 2003 ident: ijs000318-Ramisse1 article-title: DNA-DNA hybridization study of Burkholderia species using genomic DNA macro-array analysis coupled to reverse genome probing publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.02483-0 contributor: fullname: Ramisse – volume: 59 start-page: 2599 year: 2009 ident: ijs000318-Houf6 article-title: Arcobacter thereius sp. nov., isolated from pigs and ducks publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.006650-0 contributor: fullname: Houf – volume: 44 start-page: 846 year: 1994 ident: ijs000318-Stackebrandt1 article-title: Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology publication-title: Int J Syst Bacteriol doi: 10.1099/00207713-44-4-846 contributor: fullname: Stackebrandt – volume: 93 start-page: 153 year: 2003 ident: ijs000318-Kabeya1 article-title: Distribution of Arcobacter species among livestock in Japan publication-title: Vet Microbiol doi: 10.1016/S0378-1135(02)00312-7 contributor: fullname: Kabeya – volume: 20 start-page: 86 year: 1984 ident: ijs000318-Lanave1 article-title: A new method for calculating evolutionary substitution rates publication-title: J Mol Evol doi: 10.1007/BF02101990 contributor: fullname: Lanave – volume: 34 start-page: 105 year: 2011 ident: ijs000318-Figueras1 article-title: Arcobacter molluscorum sp. nov., a new species isolated from shellfish publication-title: Syst Appl Microbiol doi: 10.1016/j.syapm.2010.10.001 contributor: fullname: Figueras – volume: 56 start-page: 1028 year: 2010 ident: ijs000318-Chao1 article-title: Characterization of Pseudomonas aeruginosa fatty acid profiles in biofilms and batch planktonic cultures publication-title: Can J Microbiol doi: 10.1139/W10-093 contributor: fullname: Chao – volume: 193 start-page: 89 year: 2000 ident: ijs000318-Houf12 article-title: Development of a multiplex PCR assay for the simultaneous detection and identification of Arcobacter butzleri Arcobacter cryaerophilus Arcobacter skirrowii publication-title: FEMS Microbiol Lett doi: 10.1111/j.1574-6968.2000.tb09407.x contributor: fullname: Houf – volume: 47 start-page: 98 year: 2007 ident: ijs000318-Prakash1 article-title: Polyphasic approach of bacterial classification – an overview of recent advances publication-title: Indian J Microbiol doi: 10.1007/s12088-007-0022-x contributor: fullname: Prakash – volume: 18 start-page: 1 year: 1969 ident: ijs000318-Kluge1 article-title: Quantitative phyletics and the evolution of anurans publication-title: Syst Zool doi: 10.2307/2412407 contributor: fullname: Kluge – volume: 2 start-page: e00377 year: 2014 ident: ijs000318-Adam1 article-title: Draft genome sequences of three Arcobacter strains of pig and dairy cattle manure origin publication-title: Genome Announc doi: 10.1128/genomeA.00377-14 contributor: fullname: Adam – volume: 58 start-page: 3413 year: 1992 ident: ijs000318-Bruce1 article-title: Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction publication-title: Appl Environ Microbiol doi: 10.1128/AEM.58.10.3413-3416.1992 contributor: fullname: Bruce – volume: 41 start-page: 88 year: 1991 ident: ijs000318-Vandamme1 article-title: Revision of Campylobacter Helicobacter, and Wolinella taxonomy: emendation of generic descriptions and proposal of Arcobacter gen. nov. publication-title: Int J Syst Bacteriol doi: 10.1099/00207713-41-1-88 contributor: fullname: Vandamme – volume: 102 start-page: 212 year: 2012 ident: ijs000318-Greco-Stewart1 article-title: Serratia marcescens strains implicated in adverse transfusion reactions form biofilms in platelet concentrates and demonstrate reduced detection by automated culture publication-title: Vox Sang doi: 10.1111/j.1423-0410.2011.01550.x contributor: fullname: Greco-Stewart – volume: 106 start-page: 19126 year: 2009 ident: ijs000318-Richter1 article-title: Shifting the genomic gold standard for the prokaryotic species definition publication-title: Proc Natl Acad Sci U S A doi: 10.1073/pnas.0906412106 contributor: fullname: Richter – volume: 9 start-page: 671 year: 2012 ident: ijs000318-Schneider1 article-title: NIH Image to ImageJ: 25 years of image analysis publication-title: Nat Methods doi: 10.1038/nmeth.2089 contributor: fullname: Schneider – volume: 56 start-page: 937 year: 2006 ident: ijs000318-Korczak1 article-title: Genetic relatedness within the genus Campylobacter inferred from rpoB sequences publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.64109-0 contributor: fullname: Korczak – volume: 68 start-page: 408 year: 2007 ident: ijs000318-Houf1 article-title: Isolation and characterization of the emerging foodborn pathogen Arcobacter from human stool publication-title: J Microbiol Methods doi: 10.1016/j.mimet.2006.09.020 contributor: fullname: Houf – volume: 60 start-page: 531 year: 2010 ident: ijs000318-Kim1 article-title: Arcobacter marinus sp. nov publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.007740-0 contributor: fullname: Kim – volume: 68 start-page: 2172 year: 2002 ident: ijs000318-Houf1234 article-title: Assessment of the genetic diversity among arcobacters isolated from poultry products by using two PCR-based typing methods publication-title: Appl Environ Microbiol doi: 10.1128/AEM.68.5.2172-2178.2002 contributor: fullname: Houf – volume: 17 start-page: 368 year: 1981 ident: ijs000318-Felsenstein1 article-title: Evolutionary trees from DNA sequences: a maximum likelihood approach publication-title: J Mol Evol doi: 10.1007/BF01734359 contributor: fullname: Felsenstein – volume: 63 start-page: 4619 year: 2013 ident: ijs000318-Sasi1 article-title: Arcobacter anaerophilus sp. nov., isolated from an estuarine sediment and emended description of the genus Arcobacter publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.054155-0 contributor: fullname: Sasi Jyothsna – volume: 72 start-page: 2691 year: 2006 ident: ijs000318-Tambong1 article-title: Oligonucleotide array for identification and detection of Pythium species publication-title: Appl Environ Microbiol doi: 10.1128/AEM.72.4.2691-2706.2006 contributor: fullname: Tambong – volume-title: Principles and Techniques of Electron Microscopy: Biological Applications year: 1989 ident: ijs000318-Hayat1 doi: 10.1007/978-1-349-09857-6 contributor: fullname: Hayat – volume: 38 start-page: 30 year: 2015 ident: ijs000318-Levican1 article-title: Arcobacter ebronensis sp. nov. and Arcobacter aquimarinus sp. nov., two new species isolated from marine environment publication-title: Syst Appl Microbiol doi: 10.1016/j.syapm.2014.10.011 contributor: fullname: Levican – volume-title: Methods for antimicrobial dilution and disk susceptibility testing of infrequently isolated fastidious bacteria; Approved Guideline, 2nd edn. CLSI document M45-A2 year: 2010 ident: ijs000318-CLSI1 – volume: 55 start-page: 393 year: 2006 ident: ijs000318-Hill1 article-title: Identification of Campylobacter spp. and discrimination from Helicobacter Arcobacter spp. by direct sequencing of PCR-amplified cpn60 sequences and comparison to cpnDB, a chaperonin reference sequence database publication-title: J Med Microbiol doi: 10.1099/jmm.0.46282-0 contributor: fullname: Hill – volume: 28 start-page: 2731 year: 2011 ident: ijs000318-Tamura1 article-title: MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods publication-title: Mol Biol Evol doi: 10.1093/molbev/msr121 contributor: fullname: Tamura – volume: 80 start-page: 281 year: 2010 ident: ijs000318-Douidah1 article-title: Identification of five human and mammal associated Arcobacter species by a novel multiplex-PCR assay publication-title: J Microbiol Methods doi: 10.1016/j.mimet.2010.01.009 contributor: fullname: Douidah – volume: 55 start-page: 713 year: 2005 ident: ijs000318-Houf12345 article-title: Arcobacter cibarius sp. nov., isolated from broiler carcasses publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.63103-0 contributor: fullname: Houf – volume: 25 start-page: 3389 year: 1997 ident: ijs000318-Altschul1 article-title: Gapped blast and psi-blast: a new generation of protein database search programs publication-title: Nucleic Acids Res doi: 10.1093/nar/25.17.3389 contributor: fullname: Altschul – volume: 37 start-page: 463 year: 1987 ident: ijs000318-Wayne1 article-title: International Committee on Systematic Bacteriology, Report of the ad hoc committee on reconciliation of approaches to bacterial systematics publication-title: Int J Syst Bacteriol doi: 10.1099/00207713-37-4-463 contributor: fullname: Wayne – volume: 61 start-page: 2155 year: 2011 ident: ijs000318-Collado1 article-title: Arcobacter defluvii sp. nov., isolated from sewage samples publication-title: Int J Syst Evol Microbiol doi: 10.1099/ijs.0.025668-0 contributor: fullname: Collado – volume: 105 start-page: 149 year: 2005 ident: ijs000318-Van12 article-title: Prevalence, enumeration and strain variation of Arcobacter species in the faeces of healthy cattle in Belgium publication-title: Vet Microbiol doi: 10.1016/j.vetmic.2004.11.002 contributor: fullname: Van Driessche – volume: 31 start-page: 225 year: 1995 ident: ijs000318-On1 article-title: Isolation of Arcobacter butzleri from a neonate with bacteraemia publication-title: J Infect doi: 10.1016/S0163-4453(95)80031-X contributor: fullname: On – volume: 106 start-page: 1661 year: 2009 ident: ijs000318-Fera1 article-title: Pet cats as carriers of Arcobacter spp. in Southern Italy publication-title: J Appl Microbiol doi: 10.1111/j.1365-2672.2008.04133.x contributor: fullname: Fera – volume: 43 start-page: 2256 year: 2005 ident: ijs000318-Van1 article-title: Identification of non-Helicobacter pylori spiral organisms in gastric samples from humans, dogs, and cats publication-title: J Clin Microbiol doi: 10.1128/JCM.43.5.2256-2260.2005 contributor: fullname: Van den Bulck – volume: 115 start-page: 1 year: 2006 ident: ijs000318-Ho1 article-title: Arcobacter, what is known and unknown about a potential foodborne zoonotic agent! publication-title: Vet Microbiol doi: 10.1016/j.vetmic.2006.03.004 contributor: fullname: Ho
SSID	ssj0014600
Score	2.4126043
Snippet	A study was undertaken to determine the prevalence and diversity of species of the genus Arcobacter in pig and dairy cattle manure, which led to the... A study was undertaken to determine the prevalence and diversity of species of the genus Arcobacter in pig and dairy cattle manure, which led to the...
SourceID	hal proquest crossref pubmed
SourceType	Open Access Repository Aggregation Database Index Database
StartPage	2709
SubjectTerms	Animals Arcobacter Arcobacter - classification Arcobacter - genetics Arcobacter - isolation & purification Bacteriology Base Composition Cattle DNA, Bacterial DNA, Bacterial - genetics Fatty Acids Fatty Acids - chemistry Genes, Bacterial Life Sciences Manure Manure - microbiology Microbiology and Parasitology Molecular Sequence Data Nucleic Acid Hybridization Ontario Phylogeny Polymerase Chain Reaction RNA, Ribosomal, 16S RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Swine
Title	Arcobacter lanthieri sp. nov., isolated from pig and dairy cattle manure
URI	https://www.ncbi.nlm.nih.gov/pubmed/25977280 https://search.proquest.com/docview/1709397562 https://riip.hal.science/pasteur-01352693
Volume	65
hasFullText	1
inHoldings	1
isFullTextHit
isPrint
link	http://sdu.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1Li9swEBbJlkIvS99NX6jQ9pJ669hSJB1DN0tKw_bQLOzNyLbMut11ghMH9t93xpIfSymkh16MURyZzHwZzYxmPhHyXkvjy0xrL5QpBChShp7OEunJLNSZ5j4TBhNuix_i_FKeztl8MGgOWevG_qumYQx0jZ2z_6DtdlIYgHvQOVxB63A9SO-zMoG_KFIwYy5yh0dd5-Pt5mRcrPe1Jcjh_Rr9zLqzZJPbHsVU5-XtOKkpjbGk1RGNNH7r3cRhj26ixwSN05i9-3FYjHeTdyxPnfFHH7dKfnlLu0e_N0ioXd8a2yhUlvnBT9fFOe0-yvUa3m0xaEtcu7zETdzUHmNZsCsNd9mOCW9r7WCxshaaTace910G1Jlwe9yEg6rs22Phq97aHgjb2PnHugF-Mig2_7k9wUo_NHTd-tjUBJx_j84ulstoNb9cDcm9ACwbHtZw-vVbu23FwH103RUw4-f-fHf8nuEVVt3-LaSpXZvVQ3LsYhI6s2B6RAameEzu21NKb5-QRQcp2kKKAqQoQuoTbQBFEVAUAEUBCbQGFLWAohZQT8nF2Xz1ZeG5Azi8hIXhzkszEWvFuU6EUAGXJuOMYd-K1hBnousbmCQ0UiWaBzFjQrJQJNmEZbHSvgjCZ-SoWBfmBaFaqgxCI57xBD8OVWwETw1SOzGVCjkiHxrxRBvLsxLZ-ggVgRgjJLFFMY7IR5Bd-wiSoy9my2ijAexVGUFAw4OpCveTEXnXiDcCi4nbYLow62obTQAT4IWD4z8iz63c2_kCpGMMpP_ygG-_Ig86hL4mR7uyMm_IcJtWb2tU_AZ3A5SA
link.rule.ids	230,315,782,786,887,27934,27935
linkProvider	Flying Publisher
openUrl	ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Arcobacter+lanthieri+sp.+nov.%2C+isolated+from+pig+and+dairy+cattle+manure&rft.jtitle=International+journal+of+systematic+and+evolutionary+microbiology&rft.au=Whiteduck-L%C3%A9veill%C3%A9e%2C+Kerri&rft.au=Whiteduck-L%C3%A9veill%C3%A9e%2C+Jenni&rft.au=Cloutier%2C+Michel&rft.au=Tambong%2C+James+T&rft.date=2015-08-01&rft.eissn=1466-5034&rft.volume=65&rft.issue=8&rft.spage=2709&rft.epage=2716&rft_id=info:doi/10.1099%2Fijs.0.000318&rft.externalDBID=NO_FULL_TEXT
thumbnail_l	http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=1466-5026&client=summon
thumbnail_m	http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=1466-5026&client=summon
thumbnail_s	http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=1466-5026&client=summon