Diversity and enzymatic potential of thermophilic bacteria associated with terrestrial hot springs in Algeria
This study aims to determine the diversity of culturable thermophilic bacteria isolated from eight terrestrial hot springs in Northeastern of Algeria using the conventional methods, SDS-PAGE fingerprinting of whole-cell proteins and 16S rRNA gene sequencing. In addition, their hydrolytic enzyme acti...
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| Published in: | Brazilian journal of microbiology Vol. 51; no. 4; pp. 1987 - 2007 |
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| Main Authors: | , , , , , , , |
| Format: | Journal Article |
| Language: | English |
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Springer International Publishing
01-12-2020
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| Abstract | This study aims to determine the diversity of culturable thermophilic bacteria isolated from eight terrestrial hot springs in Northeastern of Algeria using the conventional methods, SDS-PAGE fingerprinting of whole-cell proteins and 16S rRNA gene sequencing. In addition, their hydrolytic enzyme activities were also investigated. A total of 293 strains were isolated from the hot springs’ water and sediment using different culture media. Overall, five distinct bacterial groups were characterized by whole-cell protein pattern analysis. Based on the 16S rRNA gene sequencing of 100 selected strains, the isolates were assigned to the following three major phyla:
Firmicutes
(93%),
Deinococcus-Thermus
(5%), and
Actinobacteria
(2%), which included 27 distinct species belonging to 12 different phylotypes,
Aeribacillus
,
Aneurinibacillus
,
Anoxybacillus
,
Bacillus
,
Brevibacillus
,
Geobacillus
,
Laceyella
,
Meiothermus
,
Saccharomonospora
,
Thermoactinomyces
,
Thermobifida
, and
Thermus
. The screening for nine extracellular enzymes showed that 65.87% of the isolates presented at least five types of enzyme activities, and 6.48% of strains combined all tested enzymes (amylase, cellulase, pectinase, esculinase, protease, gelatinase, lipase, lecithinase, and nuclease)
.
It was found that
Bacillus
,
Anoxybacillus
,
Aeribacillus
, and
Aneurinibacillus
were the genera showing the highest activities. Likewise, the study showed an abundant and diverse thermophilic community with novel taxa presenting a promising source of thermozymes with important biotechnological applications. This study showed that a combined identification method using SDS-PAGE profiles of whole-cell proteins and subsequent 16S rRNA gene sequence analysis could successfully differentiate thermophilic bacteria from Algerian hot springs. |
|---|---|
| AbstractList | This study aims to determine the diversity of culturable thermophilic bacteria isolated from eight terrestrial hot springs in Northeastern of Algeria using the conventional methods, SDS-PAGE fingerprinting of whole-cell proteins and 16S rRNA gene sequencing. In addition, their hydrolytic enzyme activities were also investigated. A total of 293 strains were isolated from the hot springs’ water and sediment using different culture media. Overall, five distinct bacterial groups were characterized by whole-cell protein pattern analysis. Based on the 16S rRNA gene sequencing of 100 selected strains, the isolates were assigned to the following three major phyla:
Firmicutes
(93%),
Deinococcus-Thermus
(5%), and
Actinobacteria
(2%), which included 27 distinct species belonging to 12 different phylotypes,
Aeribacillus
,
Aneurinibacillus
,
Anoxybacillus
,
Bacillus
,
Brevibacillus
,
Geobacillus
,
Laceyella
,
Meiothermus
,
Saccharomonospora
,
Thermoactinomyces
,
Thermobifida
, and
Thermus
. The screening for nine extracellular enzymes showed that 65.87% of the isolates presented at least five types of enzyme activities, and 6.48% of strains combined all tested enzymes (amylase, cellulase, pectinase, esculinase, protease, gelatinase, lipase, lecithinase, and nuclease)
.
It was found that
Bacillus
,
Anoxybacillus
,
Aeribacillus
, and
Aneurinibacillus
were the genera showing the highest activities. Likewise, the study showed an abundant and diverse thermophilic community with novel taxa presenting a promising source of thermozymes with important biotechnological applications. This study showed that a combined identification method using SDS-PAGE profiles of whole-cell proteins and subsequent 16S rRNA gene sequence analysis could successfully differentiate thermophilic bacteria from Algerian hot springs. |
| Author | Benammar, L. Ayachi, A. Bedaida, I. K. Gonzalez, J. M. Güler, H. I. Beldüz, A. O. Menasria, T. İnan Bektaş, K. |
| Author_xml | – sequence: 1 givenname: L. orcidid: 0000-0002-0852-8737 surname: Benammar fullname: Benammar, L. email: leyla.benammar@univ-batna2.dz organization: Department of Microbiology and Biochemistry, Faculty of Natural and Life Sciences, University of Batna 2, Molecular Biology Research Laboratory, Department of Biology, Faculty of Science, Karadeniz Technical University, Bacteriology Laboratory, Veterinary and Agricultural Sciences Institute, Department of Veterinary Sciences, University of Batna 1 – sequence: 2 givenname: K. surname: İnan Bektaş fullname: İnan Bektaş, K. organization: Department of Molecular Biology and Genetics, Faculty of Science, Karadeniz Technical University – sequence: 3 givenname: T. orcidid: 0000-0003-4925-6165 surname: Menasria fullname: Menasria, T. email: tahamenasria@hotmail.com organization: Department of Applied Biology, Faculty of Exact Sciences and Natural and Life Sciences, University of Larbi Tebessi – sequence: 4 givenname: A. O. surname: Beldüz fullname: Beldüz, A. O. organization: Molecular Biology Research Laboratory, Department of Biology, Faculty of Science, Karadeniz Technical University – sequence: 5 givenname: H. I. surname: Güler fullname: Güler, H. I. organization: Department of Molecular Biology and Genetics, Faculty of Science, Karadeniz Technical University – sequence: 6 givenname: I. K. surname: Bedaida fullname: Bedaida, I. K. organization: Department of Microbiology and Biochemistry, Faculty of Natural and Life Sciences, University of Batna 2 – sequence: 7 givenname: J. M. surname: Gonzalez fullname: Gonzalez, J. M. organization: Spanish National Research Council Seville (CSIC), Institute of Natural Resources and Agrobiology of Seville (IRNAS) – sequence: 8 givenname: A. surname: Ayachi fullname: Ayachi, A. organization: Bacteriology Laboratory, Veterinary and Agricultural Sciences Institute, Department of Veterinary Sciences, University of Batna 1 |
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| Keywords | Thermal spring Thermozyme Culture-dependent method Thermophile Algeria Biodiversity SDS-PAGE fingerprinting 16S rRNA gene |
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| Snippet | This study aims to determine the diversity of culturable thermophilic bacteria isolated from eight terrestrial hot springs in Northeastern of Algeria using the... |
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| SubjectTerms | Biomedical and Life Sciences Environmental Microbiology - Research Paper Food Microbiology Life Sciences Medical Microbiology Microbial Ecology Microbial Genetics and Genomics Microbiology Mycology |
| Title | Diversity and enzymatic potential of thermophilic bacteria associated with terrestrial hot springs in Algeria |
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