Detection of co-infection and recombination cases with Omicron and local Delta variants of SARS-CoV-2 in Vietnam

Detection of co-infection and recombination cases with Omicron and local Delta variants of SARS-CoV-2 in Vietnam

The first nationwide outbreak of COVID-19 in Vietnam started in late April 2021 and was caused almost exclusively by a single Delta lineage, AY.57. In early 2022, multiple Omicron variants co-circulated with Delta variants and quickly became dominant. The co-circulation of Delta and Omicron happened...

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Published in:Scientific reports Vol. 14; no. 1; pp. 14225 - 8
Main Authors: Trang, Nguyen Thu, Dien, Trinh Cong, Tam, Nguyen Thi, Cuong, Phan Manh, Van Duyet, Le, Thuong, Nguyen Thi Hong, Trang, Van Dinh, Thach, Pham Ngoc, van Doorn, H. Rogier, Kesteman, Thomas
Format: Journal Article
Language:English
Published: London Nature Publishing Group UK 20-06-2024
Nature Publishing Group
Nature Portfolio
Subjects:
631/326
631/326/596
Adult
Coinfection - epidemiology
Coinfection - virology
COVID-19
COVID-19 - epidemiology
COVID-19 - virology
Epidemiology
Female
Genome, Viral - genetics
Genomics
Humanities and Social Sciences
Humans
Infections
Male
Middle Aged
multidisciplinary
Phylogeny
Recombinants
Recombination
Recombination, Genetic
RNA, Viral - genetics
SARS-CoV-2 - genetics
SARS-CoV-2 - isolation & purification
Science
Science (multidisciplinary)
Severe acute respiratory syndrome coronavirus 2
Vietnam - epidemiology
Vietnam
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Abstract The first nationwide outbreak of COVID-19 in Vietnam started in late April 2021 and was caused almost exclusively by a single Delta lineage, AY.57. In early 2022, multiple Omicron variants co-circulated with Delta variants and quickly became dominant. The co-circulation of Delta and Omicron happened leading to possibility of co-infection and recombination events which can be revealed by viral genomic data. From January to October 2022, a total of 1028 viral RNA samples out of 4852 positive samples (Ct < 30) were sequenced by the long pooled amplicons method on Illumina platforms. All sequencing data was analysed by the workflow for SARS-CoV-2 on CLC genomics workbench and Illumina Dragen Covid application. Among those sequenced samples, we detected a case of Delta AY.57/Omicron BA.1 co-infection and two cases of infection with Delta AY.57/Omicron BA.2 recombinants which were nearly identical and had different epidemiological characteristics. Since the AY.57 lineage circulated almost exclusively in Vietnam, these results strongly suggest domestic events of co-infection and recombination. These findings highlight the strengths of genomic surveillance in monitoring the circulating variants in the community enabling rapid identification of viral changes that may affect viral properties and evolutionary events.
AbstractList The first nationwide outbreak of COVID-19 in Vietnam started in late April 2021 and was caused almost exclusively by a single Delta lineage, AY.57. In early 2022, multiple Omicron variants co-circulated with Delta variants and quickly became dominant. The co-circulation of Delta and Omicron happened leading to possibility of co-infection and recombination events which can be revealed by viral genomic data. From January to October 2022, a total of 1028 viral RNA samples out of 4852 positive samples (Ct < 30) were sequenced by the long pooled amplicons method on Illumina platforms. All sequencing data was analysed by the workflow for SARS-CoV-2 on CLC genomics workbench and Illumina Dragen Covid application. Among those sequenced samples, we detected a case of Delta AY.57/Omicron BA.1 co-infection and two cases of infection with Delta AY.57/Omicron BA.2 recombinants which were nearly identical and had different epidemiological characteristics. Since the AY.57 lineage circulated almost exclusively in Vietnam, these results strongly suggest domestic events of co-infection and recombination. These findings highlight the strengths of genomic surveillance in monitoring the circulating variants in the community enabling rapid identification of viral changes that may affect viral properties and evolutionary events.The first nationwide outbreak of COVID-19 in Vietnam started in late April 2021 and was caused almost exclusively by a single Delta lineage, AY.57. In early 2022, multiple Omicron variants co-circulated with Delta variants and quickly became dominant. The co-circulation of Delta and Omicron happened leading to possibility of co-infection and recombination events which can be revealed by viral genomic data. From January to October 2022, a total of 1028 viral RNA samples out of 4852 positive samples (Ct < 30) were sequenced by the long pooled amplicons method on Illumina platforms. All sequencing data was analysed by the workflow for SARS-CoV-2 on CLC genomics workbench and Illumina Dragen Covid application. Among those sequenced samples, we detected a case of Delta AY.57/Omicron BA.1 co-infection and two cases of infection with Delta AY.57/Omicron BA.2 recombinants which were nearly identical and had different epidemiological characteristics. Since the AY.57 lineage circulated almost exclusively in Vietnam, these results strongly suggest domestic events of co-infection and recombination. These findings highlight the strengths of genomic surveillance in monitoring the circulating variants in the community enabling rapid identification of viral changes that may affect viral properties and evolutionary events.
The first nationwide outbreak of COVID-19 in Vietnam started in late April 2021 and was caused almost exclusively by a single Delta lineage, AY.57. In early 2022, multiple Omicron variants co-circulated with Delta variants and quickly became dominant. The co-circulation of Delta and Omicron happened leading to possibility of co-infection and recombination events which can be revealed by viral genomic data. From January to October 2022, a total of 1028 viral RNA samples out of 4852 positive samples (Ct < 30) were sequenced by the long pooled amplicons method on Illumina platforms. All sequencing data was analysed by the workflow for SARS-CoV-2 on CLC genomics workbench and Illumina Dragen Covid application. Among those sequenced samples, we detected a case of Delta AY.57/Omicron BA.1 co-infection and two cases of infection with Delta AY.57/Omicron BA.2 recombinants which were nearly identical and had different epidemiological characteristics. Since the AY.57 lineage circulated almost exclusively in Vietnam, these results strongly suggest domestic events of co-infection and recombination. These findings highlight the strengths of genomic surveillance in monitoring the circulating variants in the community enabling rapid identification of viral changes that may affect viral properties and evolutionary events.
Abstract The first nationwide outbreak of COVID-19 in Vietnam started in late April 2021 and was caused almost exclusively by a single Delta lineage, AY.57. In early 2022, multiple Omicron variants co-circulated with Delta variants and quickly became dominant. The co-circulation of Delta and Omicron happened leading to possibility of co-infection and recombination events which can be revealed by viral genomic data. From January to October 2022, a total of 1028 viral RNA samples out of 4852 positive samples (Ct < 30) were sequenced by the long pooled amplicons method on Illumina platforms. All sequencing data was analysed by the workflow for SARS-CoV-2 on CLC genomics workbench and Illumina Dragen Covid application. Among those sequenced samples, we detected a case of Delta AY.57/Omicron BA.1 co-infection and two cases of infection with Delta AY.57/Omicron BA.2 recombinants which were nearly identical and had different epidemiological characteristics. Since the AY.57 lineage circulated almost exclusively in Vietnam, these results strongly suggest domestic events of co-infection and recombination. These findings highlight the strengths of genomic surveillance in monitoring the circulating variants in the community enabling rapid identification of viral changes that may affect viral properties and evolutionary events.
ArticleNumber 14225
Author Dien, Trinh Cong
Tam, Nguyen Thi
Trang, Nguyen Thu
Trang, Van Dinh
Cuong, Phan Manh
Van Duyet, Le
Kesteman, Thomas
Thuong, Nguyen Thi Hong
Thach, Pham Ngoc
van Doorn, H. Rogier
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Cites_doi 10.1002/jmv.27780
10.1038/s41579-022-00841-7
10.1099/mgen.0.000751
10.5365/wpsar.2022.13.3.955
10.17504/protocols.io.befyjbpw
10.3390/v14061239
10.3390/v15051063
10.1016/j.arbres.2023.06.004
10.3389/fpubh.2022.859900
10.1007/s12291-022-01109-w
10.2807/1560-7917.ES.2020.25.3.2000045
10.1093/bioinformatics/bts503
10.3201/eid2905.221787
10.1093/cid/ciaa1130
10.1002/jmv.27524
10.5365/wpsar.2022.13.4.977
10.21105/joss.03773
10.3389/fcimb.2021.596201
10.1016/j.sjbs.2022.103372
10.1038/s41467-023-38435-3
10.1016/j.medj.2022.10.002
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References MohapatraRKKandiVTuliHSChakrabortyCDhamaKThe recombinant variants of SARS-CoV-2: Concerns continues amid COVID-19 pandemicJ. Med. Virol.20229435061:CAS:528:DC%2BB38XhtFersL%2FM10.1002/jmv.27780354198069088633
WHO. Tracking SARS-CoV-2 variants. https://www.who.int/activities/tracking-SARS-CoV-2-variants.
NguyenTTSpatiotemporal evolution of SARS-CoV-2 alpha and delta variants during a large nationwide outbreak in Vietnam, 2021Emerg. Infect. Dis.202310.3201/eid2905.2217873808639910683813
DoHSystematic sequencing of imported cases leads to detection of SARS-CoV-2 B. 1.1. 529 (Omicron) variant in central Viet Nam: Systematic sequencing of SARS-CoV-2 in Viet NamWestern Pac. Surv. Response202213410.5365/wpsar.2022.13.4.977
AksamentovIRoemerCHodcroftEBNeherRANextclade: Clade assignment, mutation calling and quality control for viral genomesJ. Open Source Softw.2021637732021JOSS....6.3773A10.21105/joss.03773
DezordiFZUnusual SARS-CoV-2 intrahost diversity reveals lineage superinfectionMicrob Genom.202210.1099/mgen.0.000751352977579176291
FocosiDMaggiFSecond-generation SARS-CoV-2 recombinants: Lessons from other virusesViruses202315106310.3390/v150510633724314910221267
Illumina. DRAGEN COVID Lineage. https://sapac.illumina.com/products/by-type/informatics-products/basespace-sequence-hub/apps/dragen-covid-lineage.html.
SinghPSharmaKShawDBhargavaANegiSSMosaic recombination inflicted various SARS-CoV-2 lineages to emerge into novel virus variants: A review updateIndian J. Clin. Biochem.202210.1007/s12291-022-01109-w382230059759274
Illumina. Nextera XT DNA library prep kit reference guide. (2018).
BaseSpace (Illumina), App Dashboard.https://basespace.illumina.com/dashboard.
KumarAWuhan to world: the COVID-19 pandemicFront. Cell Infect. Microbiol.202110.3389/fcimb.2021.596201352375288740292
Organization, W. H. Operational considerations to expedite genomic sequencing component of GISRS surveillance of SARS-CoV-2, 16 February 2021 (World Health Organization, 2021).
UngTTHOccurrence of the Omicron variant of SARS-CoV-2 in northern Viet Nam in early 2022WPSAR2022131510.5365/wpsar.2022.13.3.955366881849831598
García-AlcaldeFQualimap: Evaluating next-generation sequencing alignment dataBioinformatics201228267826791:CAS:528:DC%2BC38XhsFWksbnP10.1093/bioinformatics/bts50322914218
ThaiPQThe first 100 days of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) control in VietnamClin. Infect. Dis.202172e334e3421:CAS:528:DC%2BB3MXhtFyitrfJ10.1093/cid/ciaa113032738143
SaxenaSKCharacterization of the novel SARS-CoV-2 Omicron (B. 1.1. 529) variant of concern and its global perspectiveJ. Med. Virol.202294173817441:CAS:528:DC%2BB38XotlCrtg%3D%3D10.1002/jmv.2752434905235
EdenJ-SSimESARS-CoV-2 genome sequencing using long pooled amplicons on illumina platformsGen20201097701510.17504/protocols.io.befyjbpw
WHO Vietnam. Viet Nam COVID-19 Situation Report #79. https://www.who.int/vietnam/internal-publications-detail/covid-19-in-viet-nam-situation-report-79.
WHO Vietnam. Viet Nam COVID-19 Situation Report #76. https://www.who.int/vietnam/internal-publications-detail/covid-19-in-viet-nam-situation-report-76.
Analysis of SARS-CoV-2 data, QIAGEN CLC Genomics. https://digitalinsights.qiagen.com/resources/science/sars-cov-2-resources
ZhangJUncommon presentation of COVID-19: XBL variantArchivos De Bronconeumologia202310.1016/j.arbres.2023.06.0043771476610266882
TamuraTVirological characteristics of the SARS-CoV-2 XBB variant derived from recombination of two Omicron subvariantsNat. Commun.20231428002023NatCo..14.2800T1:CAS:528:DC%2BB3sXhtVGitbfM10.1038/s41467-023-38435-33719370610187524
Motulsky, H. J. GraphPad Statistics Guide. , <http://www.graphpad.com/guides/prism/8/statistics/index.htm> (2016).
FocosiDMaggiFRecombination in coronaviruses, with a focus on SARS-CoV-2Viruses20221412391:CAS:528:DC%2BB38Xhs1GlurfJ10.3390/v14061239357467109228924
BolzeAEvidence for SARS-CoV-2 Delta and Omicron co-infections and recombinationMed202238488591:CAS:528:DC%2BB38XivVSjsbnK10.1016/j.medj.2022.10.00236332633
CarabelliAMSARS-CoV-2 variant biology: Immune escape, transmission and fitnessNat. Rev. Microbiol.202310.1038/s41579-022-00841-7366534469847462
KozlakidisZEvidence for recombination as an evolutionary mechanism in coronaviruses: Is SARS-CoV-2 an exception?Front. Public Health.202210.3389/fpubh.2022.859900362491989559183
CormanVMDetection of 2019 novel coronavirus (2019-nCoV) by real-time RT-PCREurosurveillance202025200004510.2807/1560-7917.ES.2020.25.3.2000045319923876988269
ManjunathRGaonkarSLSalehEAMHusainKA comprehensive review on covid-19 omicron (B. 1.1. 529) variantSaudi J. Biol. Sci.2022111:CAS:528:DC%2BB38XhvFCksLnO10.1016/j.sjbs.2022.103372
WHO Vietnam. Viet Nam COVID-19 Situation Report #77. https://www.who.int/vietnam/internal-publications-detail/covid-19-in-viet-nam-situation-report-77.
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FZ Dezordi (64898_CR12) 2022
64898_CR24
T Tamura (64898_CR18) 2023; 14
AM Carabelli (64898_CR15) 2023
64898_CR22
H Do (64898_CR7) 2022; 13
TTH Ung (64898_CR10) 2022; 13
J-S Eden (64898_CR23) 2020; 10977
64898_CR27
PQ Thai (64898_CR3) 2021; 72
TT Nguyen (64898_CR4) 2023
D Focosi (64898_CR19) 2023; 15
64898_CR26
64898_CR9
64898_CR25
64898_CR8
P Singh (64898_CR16) 2022
F García-Alcalde (64898_CR30) 2012; 28
RK Mohapatra (64898_CR17) 2022; 94
VM Corman (64898_CR21) 2020; 25
64898_CR31
64898_CR13
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SK Saxena (64898_CR6) 2022; 94
R Manjunath (64898_CR5) 2022; 1
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References_xml – volume: 94
  start-page: 3506
  year: 2022
  ident: 64898_CR17
  publication-title: J. Med. Virol.
  doi: 10.1002/jmv.27780
  contributor:
    fullname: RK Mohapatra
– year: 2023
  ident: 64898_CR15
  publication-title: Nat. Rev. Microbiol.
  doi: 10.1038/s41579-022-00841-7
  contributor:
    fullname: AM Carabelli
– year: 2022
  ident: 64898_CR12
  publication-title: Microb Genom.
  doi: 10.1099/mgen.0.000751
  contributor:
    fullname: FZ Dezordi
– volume: 13
  start-page: 1
  year: 2022
  ident: 64898_CR10
  publication-title: WPSAR
  doi: 10.5365/wpsar.2022.13.3.955
  contributor:
    fullname: TTH Ung
– ident: 64898_CR31
– volume: 10977
  start-page: 015
  year: 2020
  ident: 64898_CR23
  publication-title: Gen
  doi: 10.17504/protocols.io.befyjbpw
  contributor:
    fullname: J-S Eden
– volume: 14
  start-page: 1239
  year: 2022
  ident: 64898_CR14
  publication-title: Viruses
  doi: 10.3390/v14061239
  contributor:
    fullname: D Focosi
– ident: 64898_CR9
– volume: 15
  start-page: 1063
  year: 2023
  ident: 64898_CR19
  publication-title: Viruses
  doi: 10.3390/v15051063
  contributor:
    fullname: D Focosi
– ident: 64898_CR1
– ident: 64898_CR27
– ident: 64898_CR25
– year: 2023
  ident: 64898_CR20
  publication-title: Archivos De Bronconeumologia
  doi: 10.1016/j.arbres.2023.06.004
  contributor:
    fullname: J Zhang
– year: 2022
  ident: 64898_CR29
  publication-title: Front. Public Health.
  doi: 10.3389/fpubh.2022.859900
  contributor:
    fullname: Z Kozlakidis
– year: 2022
  ident: 64898_CR16
  publication-title: Indian J. Clin. Biochem.
  doi: 10.1007/s12291-022-01109-w
  contributor:
    fullname: P Singh
– volume: 25
  start-page: 2000045
  year: 2020
  ident: 64898_CR21
  publication-title: Eurosurveillance
  doi: 10.2807/1560-7917.ES.2020.25.3.2000045
  contributor:
    fullname: VM Corman
– volume: 28
  start-page: 2678
  year: 2012
  ident: 64898_CR30
  publication-title: Bioinformatics
  doi: 10.1093/bioinformatics/bts503
  contributor:
    fullname: F García-Alcalde
– ident: 64898_CR13
– ident: 64898_CR8
– ident: 64898_CR24
– year: 2023
  ident: 64898_CR4
  publication-title: Emerg. Infect. Dis.
  doi: 10.3201/eid2905.221787
  contributor:
    fullname: TT Nguyen
– volume: 72
  start-page: e334
  year: 2021
  ident: 64898_CR3
  publication-title: Clin. Infect. Dis.
  doi: 10.1093/cid/ciaa1130
  contributor:
    fullname: PQ Thai
– volume: 94
  start-page: 1738
  year: 2022
  ident: 64898_CR6
  publication-title: J. Med. Virol.
  doi: 10.1002/jmv.27524
  contributor:
    fullname: SK Saxena
– volume: 13
  start-page: 4
  year: 2022
  ident: 64898_CR7
  publication-title: Western Pac. Surv. Response
  doi: 10.5365/wpsar.2022.13.4.977
  contributor:
    fullname: H Do
– volume: 6
  start-page: 3773
  year: 2021
  ident: 64898_CR11
  publication-title: J. Open Source Softw.
  doi: 10.21105/joss.03773
  contributor:
    fullname: I Aksamentov
– year: 2021
  ident: 64898_CR2
  publication-title: Front. Cell Infect. Microbiol.
  doi: 10.3389/fcimb.2021.596201
  contributor:
    fullname: A Kumar
– volume: 1
  start-page: 1
  year: 2022
  ident: 64898_CR5
  publication-title: Saudi J. Biol. Sci.
  doi: 10.1016/j.sjbs.2022.103372
  contributor:
    fullname: R Manjunath
– ident: 64898_CR26
– volume: 14
  start-page: 2800
  year: 2023
  ident: 64898_CR18
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-023-38435-3
  contributor:
    fullname: T Tamura
– ident: 64898_CR22
– volume: 3
  start-page: 848
  year: 2022
  ident: 64898_CR28
  publication-title: Med
  doi: 10.1016/j.medj.2022.10.002
  contributor:
    fullname: A Bolze
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Snippet The first nationwide outbreak of COVID-19 in Vietnam started in late April 2021 and was caused almost exclusively by a single Delta lineage, AY.57. In early...
Abstract The first nationwide outbreak of COVID-19 in Vietnam started in late April 2021 and was caused almost exclusively by a single Delta lineage, AY.57. In...
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Female
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Severe acute respiratory syndrome coronavirus 2
Vietnam - epidemiology
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Title Detection of co-infection and recombination cases with Omicron and local Delta variants of SARS-CoV-2 in Vietnam
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