Genetic Diversity and Epidemiology of Hantaviruses in Argentina

Phylogenetic analysis of a 292-nucleotide (nt) fragment of the hantavirus M genome segment from 36 rodent and 13 human samples from three known foci of hantavirus infection in Argentina was conducted. A 1654-nt fragment of the M genome segment was analyzed for 1 representative of 7 genetically disti...

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Published in:	The Journal of infectious diseases Vol. 177; no. 3; pp. 529 - 538
Main Authors:	Levis, Silvana, Morzunov, Sergey P., Rowe, Joan E., Enria, Delia, Pini, Noemi, Calderon, Gladys, Sabattini, Martha, St. Jeor, Stephen C.
Format:	Journal Article
Language:	English
Published:	Chicago, IL The University of Chicago Press 01-03-1998 University of Chicago Press Oxford University Press
Subjects:	Animals Argentina - epidemiology Biological and medical sciences Disease Reservoirs Epidemiology Fundamental and applied biological sciences. Psychology Genomes Genotypes Geographic regions Hantavirus Hantavirus - classification Hantavirus - genetics Hantavirus Infections - epidemiology Hantavirus Infections - veterinary Hantavirus Infections - virology Hantavirus pulmonary syndrome Hantavirus Pulmonary Syndrome - epidemiology Hantavirus Pulmonary Syndrome - virology Human genetics Humans Major Articles Medical genetics Microbiology Molecular Sequence Data Muridae - virology Phylogenetics Phylogeny Rodent Diseases - epidemiology Rodent Diseases - virology Rodents Virology Viruses South America Argentina America Human Rodentia Reservoir Genetic diversity Phylogeny Epidemiology Virus Vertebrata Mammalia Bunyaviridae Animal Isolate Hantavirus
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Abstract	Phylogenetic analysis of a 292-nucleotide (nt) fragment of the hantavirus M genome segment from 36 rodent and 13 human samples from three known foci of hantavirus infection in Argentina was conducted. A 1654-nt fragment of the M genome segment was analyzed for 1 representative of 7 genetically distinct hantavirus lineages identified. Additionally, the nt sequence of the complete M genome segments of Lechiguanas, Oran, and Hu39694 hantavirus genotypes was determined. nt sequence comparisons reveal that 7 hantavirus lineages from Argentina differ from each other by 11.5%–21.8% and from Sin Nombre, Bayou, and Black Creek Canal viruses by 23.8%–26.5%. Phylogenetic analyses demonstrate that they form a unique, separate branch within the clade containing other New World sigmodontine-borne hantaviruses. Most Oligoryzomys-borne hantavirus genotypes clearly map together. The Oligoryzomys-borne genotypes Lechiguanas, Oran, and Andes appear to be associated with human disease. Oligoryzomys longicaudatus was identified as the likely rodent reservoir for Andes virus.
AbstractList	Phylogenetic analysis of a 292-nucleotide (nt) fragment of the hantavirus M genome segment from 36 rodent and 13 human samples from three known foci of hantavirus infection in Argentina was conducted. A 1654-nt fragment of the M genome segment was analyzed for 1 representative of 7 genetically distinct hantavirus lineages identified. Additionally, the nt sequence of the complete M genome segments of Lechiguanas, Oran, and Hu39694 hantavirus genotypes was determined. nt sequence comparisons reveal that 7 hantavirus lineages from Argentina differ from each other by 11.5%-21.8% and from Sin Nombre, Bayou, and Black Creek Canal viruses by 23.8%-26.5%. Phylogenetic analyses demonstrate that they form a unique, separate branch within the clade containing other New World sigmodontine-borne hantaviruses. Most Oligoryzomys-borne hantavirus genotypes clearly map together. The Oligoryzomys-borne genotypes Lechiguanas, Oran, and Andes appear to be associated with human disease. Oligoryzomys longicaudatus was identified as the likely rodent reservoir for Andes virus. Phylogenetic analysis of a 292-nucleotide (nt) fragment of the hantavirus M genome segment from 36 rodent and 13 human samples from three known foci of hantavirus infection in Argentina was conducted. A 1654-nt fragment of the M genome segment was analyzed for 1 representative of 7 genetically distinct hantavirus lineages identified. Additionally, the nt sequence of the complete M genome segments of Lechiguanas, Oran, and Hu39694 hantavirus genotypes was determined, nt sequence comparisons reveal that 7 hantavirus lineages from Argentina differ from each other by 11.5%-21.8% and from Sin Nombre, Bayou, and Black Creek Canal viruses by 23.8%-26.5%. Phylogenetic analyses demonstrate that they form a unique, separate branch within the clade containing other New World sigmodontine-borne hantaviruses. Most Oligoryzomys-bome hantavirus genotypes clearly map together. The OZ/goryzomys-borne genotypes Lechiguanas, Oran, and Andes appear to be associated with human disease. Oligoryzomys longicaudatus was identified as the likely rodent reservoir for Andes virus. Abstract only
Author	Sabattini, Martha Levis, Silvana St. Jeor, Stephen C. Morzunov, Sergey P. Enria, Delia Rowe, Joan E. Calderon, Gladys Pini, Noemi
Author_xml	– sequence: 1 givenname: Silvana surname: Levis fullname: Levis, Silvana organization: Department of Microbiology, University of Nevada at Reno, Reno, Nevada, Pergamino, Argentina – sequence: 2 givenname: Sergey P. surname: Morzunov fullname: Morzunov, Sergey P. organization: Department of Microbiology, University of Nevada at Reno, Reno, Nevada, Pergamino, Argentina – sequence: 3 givenname: Joan E. surname: Rowe fullname: Rowe, Joan E. organization: Department of Microbiology, University of Nevada at Reno, Reno, Nevada, Pergamino, Argentina – sequence: 4 givenname: Delia surname: Enria fullname: Enria, Delia organization: Department of Microbiology, University of Nevada at Reno, Reno, Nevada, Pergamino, Argentina – sequence: 5 givenname: Noemi surname: Pini fullname: Pini, Noemi organization: Department of Microbiology, University of Nevada at Reno, Reno, Nevada, Pergamino, Argentina – sequence: 6 givenname: Gladys surname: Calderon fullname: Calderon, Gladys organization: Department of Microbiology, University of Nevada at Reno, Reno, Nevada, Pergamino, Argentina – sequence: 7 givenname: Martha surname: Sabattini fullname: Sabattini, Martha organization: Department of Microbiology, University of Nevada at Reno, Reno, Nevada, Pergamino, Argentina – sequence: 8 givenname: Stephen C. surname: St. Jeor fullname: St. Jeor, Stephen C. email: stjeor@scs.unr.edu organization: Department of Microbiology, University of Nevada at Reno, Reno, Nevada, Pergamino, Argentina
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SubjectTerms	Animals Argentina - epidemiology Biological and medical sciences Disease Reservoirs Epidemiology Fundamental and applied biological sciences. Psychology Genomes Genotypes Geographic regions Hantavirus Hantavirus - classification Hantavirus - genetics Hantavirus Infections - epidemiology Hantavirus Infections - veterinary Hantavirus Infections - virology Hantavirus pulmonary syndrome Hantavirus Pulmonary Syndrome - epidemiology Hantavirus Pulmonary Syndrome - virology Human genetics Humans Major Articles Medical genetics Microbiology Molecular Sequence Data Muridae - virology Phylogenetics Phylogeny Rodent Diseases - epidemiology Rodent Diseases - virology Rodents Virology Viruses
Title	Genetic Diversity and Epidemiology of Hantaviruses in Argentina
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