Genetic parameter estimations of new traits of morphological quality on gilthead seabream (Sparus aurata) by using IMAFISH_ML software
In this study, a total of 18 novel productive traits, three related to carcass [cNiT] and fifteen related to morphometric [mNiT]), were measured in gilthead seabream (Sparus aurata) using Non-invasive Technologies (NiT) as implemented in IMAFISH_ML (MatLab script). Their potential to be used in indu...
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Published in: | Aquaculture reports Vol. 21; p. 100883 |
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Abstract | In this study, a total of 18 novel productive traits, three related to carcass [cNiT] and fifteen related to morphometric [mNiT]), were measured in gilthead seabream (Sparus aurata) using Non-invasive Technologies (NiT) as implemented in IMAFISH_ML (MatLab script). Their potential to be used in industrial breeding programs were evaluated in 2348 offspring reared under different production systems (estuarine ponds, oceanic cage, inland tank) at harvest. All animals were photographed, and digitally measured and main genetic parameters were estimated. Heritability for growth traits was medium (0.25–0.37) whereas for NiT traits medium-high (0.24–0.61). In general, genetic correlations between mNiT, cNiT and growth and traits were high and positive. Image analysis artifacts such as fin unfold or shades, that may interfere in the precision of some digital measurements, were discarded as a major bias factor since heritability of NiT traits after correcting them were no significantly different from original ones. Indirect selection of growth traits through NiT traits produced a better predicted response than directly measuring Body Weight (13–23%), demonstrating that this methodological approach is highly cost-effective in terms of accuracy and data processing time.
•Genetic parameters were estimated for new technological traits defined by IMAFISH:ML software, in gilthead seabream.•High genetic correlations between novel non-invasive technological traits (NiT) with growth traits.•Direct selection of NiT traits and correlated response of body weight trait.•Format effect evaluation of unedited and edited images on estimations of genetic parameters. |
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AbstractList | In this study, a total of 18 novel productive traits, three related to carcass [cNiT] and fifteen related to morphometric [mNiT]), were measured in gilthead seabream (Sparus aurata) using Non-invasive Technologies (NiT) as implemented in IMAFISH_ML (MatLab script). Their potential to be used in industrial breeding programs were evaluated in 2348 offspring reared under different production systems (estuarine ponds, oceanic cage, inland tank) at harvest. All animals were photographed, and digitally measured and main genetic parameters were estimated. Heritability for growth traits was medium (0.25–0.37) whereas for NiT traits medium-high (0.24–0.61). In general, genetic correlations between mNiT, cNiT and growth and traits were high and positive. Image analysis artifacts such as fin unfold or shades, that may interfere in the precision of some digital measurements, were discarded as a major bias factor since heritability of NiT traits after correcting them were no significantly different from original ones. Indirect selection of growth traits through NiT traits produced a better predicted response than directly measuring Body Weight (13–23%), demonstrating that this methodological approach is highly cost-effective in terms of accuracy and data processing time.
•Genetic parameters were estimated for new technological traits defined by IMAFISH:ML software, in gilthead seabream.•High genetic correlations between novel non-invasive technological traits (NiT) with growth traits.•Direct selection of NiT traits and correlated response of body weight trait.•Format effect evaluation of unedited and edited images on estimations of genetic parameters. In this study, a total of 18 novel productive traits, three related to carcass [cNiT] and fifteen related to morphometric [mNiT]), were measured in gilthead seabream (Sparus aurata) using Non-invasive Technologies (NiT) as implemented in IMAFISH_ML (MatLab script). Their potential to be used in industrial breeding programs were evaluated in 2348 offspring reared under different production systems (estuarine ponds, oceanic cage, inland tank) at harvest. All animals were photographed, and digitally measured and main genetic parameters were estimated. Heritability for growth traits was medium (0.25–0.37) whereas for NiT traits medium-high (0.24–0.61). In general, genetic correlations between mNiT, cNiT and growth and traits were high and positive. Image analysis artifacts such as fin unfold or shades, that may interfere in the precision of some digital measurements, were discarded as a major bias factor since heritability of NiT traits after correcting them were no significantly different from original ones. Indirect selection of growth traits through NiT traits produced a better predicted response than directly measuring Body Weight (13–23%), demonstrating that this methodological approach is highly cost-effective in terms of accuracy and data processing time. |
ArticleNumber | 100883 |
Author | García-Pérez, Cathaysa Berbel, Concepción Zamorano, María Jesús Elalfy, Islam Said Manchado, Manuel Pérez-Sánchez, Jaume Arizcun, Marta Afonso, Juan Manuel Shin, Hyun Suk Armero, Eva León-Bernabeu, Sergi Lorenzo-Felipe, Álvaro |
Author_xml | – sequence: 1 givenname: Sergi surname: León-Bernabeu fullname: León-Bernabeu, Sergi organization: Universidad de las Palmas de Gran Canaria (ULPGC), Institute of Sustainable Aquaculture and Marine Ecosystems (IU-ECOAQUA), Aquaculture Research Group (GIA) Muelle de Taliarte s/n, 35214 Telde, Las Palmas de Gran Canaria, Spain – sequence: 2 givenname: Hyun Suk surname: Shin fullname: Shin, Hyun Suk organization: Universidad de las Palmas de Gran Canaria (ULPGC), Institute of Sustainable Aquaculture and Marine Ecosystems (IU-ECOAQUA), Aquaculture Research Group (GIA) Muelle de Taliarte s/n, 35214 Telde, Las Palmas de Gran Canaria, Spain – sequence: 3 givenname: Álvaro surname: Lorenzo-Felipe fullname: Lorenzo-Felipe, Álvaro organization: Universidad de las Palmas de Gran Canaria (ULPGC), Institute of Sustainable Aquaculture and Marine Ecosystems (IU-ECOAQUA), Aquaculture Research Group (GIA) Muelle de Taliarte s/n, 35214 Telde, Las Palmas de Gran Canaria, Spain – sequence: 4 givenname: Cathaysa surname: García-Pérez fullname: García-Pérez, Cathaysa organization: Universidad de las Palmas de Gran Canaria (ULPGC), Institute of Sustainable Aquaculture and Marine Ecosystems (IU-ECOAQUA), Aquaculture Research Group (GIA) Muelle de Taliarte s/n, 35214 Telde, Las Palmas de Gran Canaria, Spain – sequence: 5 givenname: Concepción surname: Berbel fullname: Berbel, Concepción organization: Investigación y Formación Agraria y Pesquera (IFAPA, Centro El Toruño, Junta de Andalucía, Camino Tiro Pichón s/n, 11500 El Puerto de Santa María, Cádiz, Spain – sequence: 6 givenname: Islam Said surname: Elalfy fullname: Elalfy, Islam Said organization: Universidad de las Palmas de Gran Canaria (ULPGC), Institute of Sustainable Aquaculture and Marine Ecosystems (IU-ECOAQUA), Aquaculture Research Group (GIA) Muelle de Taliarte s/n, 35214 Telde, Las Palmas de Gran Canaria, Spain – sequence: 7 givenname: Eva surname: Armero fullname: Armero, Eva organization: Department of Agronomic Engineering, Technical University of Cartagena, Paseo Alfonso XIII 48, Cartagena, Spain – sequence: 8 givenname: Jaume surname: Pérez-Sánchez fullname: Pérez-Sánchez, Jaume organization: Department of Biology, Culture and Pathology of Marine Species, Instituto Torre de la Sal IATS-CSIC, venta de San Antonio-Estación, Castellón, Spain – sequence: 9 givenname: Marta surname: Arizcun fullname: Arizcun, Marta organization: Spanish Institute of Oceanography, Oceanographic of Murcia, carretera de la Azohía s/n, Puerto de Mazarrón, Murcia, Spain – sequence: 10 givenname: María Jesús surname: Zamorano fullname: Zamorano, María Jesús organization: Universidad de las Palmas de Gran Canaria (ULPGC), Institute of Sustainable Aquaculture and Marine Ecosystems (IU-ECOAQUA), Aquaculture Research Group (GIA) Muelle de Taliarte s/n, 35214 Telde, Las Palmas de Gran Canaria, Spain – sequence: 11 givenname: Manuel surname: Manchado fullname: Manchado, Manuel email: manuel.manchado@juntadeandalucia.es organization: Investigación y Formación Agraria y Pesquera (IFAPA, Centro El Toruño, Junta de Andalucía, Camino Tiro Pichón s/n, 11500 El Puerto de Santa María, Cádiz, Spain – sequence: 12 givenname: Juan Manuel surname: Afonso fullname: Afonso, Juan Manuel organization: Universidad de las Palmas de Gran Canaria (ULPGC), Institute of Sustainable Aquaculture and Marine Ecosystems (IU-ECOAQUA), Aquaculture Research Group (GIA) Muelle de Taliarte s/n, 35214 Telde, Las Palmas de Gran Canaria, Spain |
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Keywords | Genetic correlation Heritability KET Gilthead seabream IMAFISH_ML Non-invasive Technology (NiT) |
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Title | Genetic parameter estimations of new traits of morphological quality on gilthead seabream (Sparus aurata) by using IMAFISH_ML software |
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