Genetic parameter estimations of new traits of morphological quality on gilthead seabream (Sparus aurata) by using IMAFISH_ML software

In this study, a total of 18 novel productive traits, three related to carcass [cNiT] and fifteen related to morphometric [mNiT]), were measured in gilthead seabream (Sparus aurata) using Non-invasive Technologies (NiT) as implemented in IMAFISH_ML (MatLab script). Their potential to be used in indu...

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Published in:Aquaculture reports Vol. 21; p. 100883
Main Authors: León-Bernabeu, Sergi, Shin, Hyun Suk, Lorenzo-Felipe, Álvaro, García-Pérez, Cathaysa, Berbel, Concepción, Elalfy, Islam Said, Armero, Eva, Pérez-Sánchez, Jaume, Arizcun, Marta, Zamorano, María Jesús, Manchado, Manuel, Afonso, Juan Manuel
Format: Journal Article
Language:English
Published: Elsevier B.V 01-11-2021
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Abstract In this study, a total of 18 novel productive traits, three related to carcass [cNiT] and fifteen related to morphometric [mNiT]), were measured in gilthead seabream (Sparus aurata) using Non-invasive Technologies (NiT) as implemented in IMAFISH_ML (MatLab script). Their potential to be used in industrial breeding programs were evaluated in 2348 offspring reared under different production systems (estuarine ponds, oceanic cage, inland tank) at harvest. All animals were photographed, and digitally measured and main genetic parameters were estimated. Heritability for growth traits was medium (0.25–0.37) whereas for NiT traits medium-high (0.24–0.61). In general, genetic correlations between mNiT, cNiT and growth and traits were high and positive. Image analysis artifacts such as fin unfold or shades, that may interfere in the precision of some digital measurements, were discarded as a major bias factor since heritability of NiT traits after correcting them were no significantly different from original ones. Indirect selection of growth traits through NiT traits produced a better predicted response than directly measuring Body Weight (13–23%), demonstrating that this methodological approach is highly cost-effective in terms of accuracy and data processing time. •Genetic parameters were estimated for new technological traits defined by IMAFISH:ML software, in gilthead seabream.•High genetic correlations between novel non-invasive technological traits (NiT) with growth traits.•Direct selection of NiT traits and correlated response of body weight trait.•Format effect evaluation of unedited and edited images on estimations of genetic parameters.
AbstractList In this study, a total of 18 novel productive traits, three related to carcass [cNiT] and fifteen related to morphometric [mNiT]), were measured in gilthead seabream (Sparus aurata) using Non-invasive Technologies (NiT) as implemented in IMAFISH_ML (MatLab script). Their potential to be used in industrial breeding programs were evaluated in 2348 offspring reared under different production systems (estuarine ponds, oceanic cage, inland tank) at harvest. All animals were photographed, and digitally measured and main genetic parameters were estimated. Heritability for growth traits was medium (0.25–0.37) whereas for NiT traits medium-high (0.24–0.61). In general, genetic correlations between mNiT, cNiT and growth and traits were high and positive. Image analysis artifacts such as fin unfold or shades, that may interfere in the precision of some digital measurements, were discarded as a major bias factor since heritability of NiT traits after correcting them were no significantly different from original ones. Indirect selection of growth traits through NiT traits produced a better predicted response than directly measuring Body Weight (13–23%), demonstrating that this methodological approach is highly cost-effective in terms of accuracy and data processing time. •Genetic parameters were estimated for new technological traits defined by IMAFISH:ML software, in gilthead seabream.•High genetic correlations between novel non-invasive technological traits (NiT) with growth traits.•Direct selection of NiT traits and correlated response of body weight trait.•Format effect evaluation of unedited and edited images on estimations of genetic parameters.
In this study, a total of 18 novel productive traits, three related to carcass [cNiT] and fifteen related to morphometric [mNiT]), were measured in gilthead seabream (Sparus aurata) using Non-invasive Technologies (NiT) as implemented in IMAFISH_ML (MatLab script). Their potential to be used in industrial breeding programs were evaluated in 2348 offspring reared under different production systems (estuarine ponds, oceanic cage, inland tank) at harvest. All animals were photographed, and digitally measured and main genetic parameters were estimated. Heritability for growth traits was medium (0.25–0.37) whereas for NiT traits medium-high (0.24–0.61). In general, genetic correlations between mNiT, cNiT and growth and traits were high and positive. Image analysis artifacts such as fin unfold or shades, that may interfere in the precision of some digital measurements, were discarded as a major bias factor since heritability of NiT traits after correcting them were no significantly different from original ones. Indirect selection of growth traits through NiT traits produced a better predicted response than directly measuring Body Weight (13–23%), demonstrating that this methodological approach is highly cost-effective in terms of accuracy and data processing time.
ArticleNumber 100883
Author García-Pérez, Cathaysa
Berbel, Concepción
Zamorano, María Jesús
Elalfy, Islam Said
Manchado, Manuel
Pérez-Sánchez, Jaume
Arizcun, Marta
Afonso, Juan Manuel
Shin, Hyun Suk
Armero, Eva
León-Bernabeu, Sergi
Lorenzo-Felipe, Álvaro
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  givenname: Hyun Suk
  surname: Shin
  fullname: Shin, Hyun Suk
  organization: Universidad de las Palmas de Gran Canaria (ULPGC), Institute of Sustainable Aquaculture and Marine Ecosystems (IU-ECOAQUA), Aquaculture Research Group (GIA) Muelle de Taliarte s/n, 35214 Telde, Las Palmas de Gran Canaria, Spain
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  surname: Lorenzo-Felipe
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  givenname: Islam Said
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  givenname: Jaume
  surname: Pérez-Sánchez
  fullname: Pérez-Sánchez, Jaume
  organization: Department of Biology, Culture and Pathology of Marine Species, Instituto Torre de la Sal IATS-CSIC, venta de San Antonio-Estación, Castellón, Spain
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  givenname: Marta
  surname: Arizcun
  fullname: Arizcun, Marta
  organization: Spanish Institute of Oceanography, Oceanographic of Murcia, carretera de la Azohía s/n, Puerto de Mazarrón, Murcia, Spain
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  givenname: María Jesús
  surname: Zamorano
  fullname: Zamorano, María Jesús
  organization: Universidad de las Palmas de Gran Canaria (ULPGC), Institute of Sustainable Aquaculture and Marine Ecosystems (IU-ECOAQUA), Aquaculture Research Group (GIA) Muelle de Taliarte s/n, 35214 Telde, Las Palmas de Gran Canaria, Spain
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  givenname: Manuel
  surname: Manchado
  fullname: Manchado, Manuel
  email: manuel.manchado@juntadeandalucia.es
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  givenname: Juan Manuel
  surname: Afonso
  fullname: Afonso, Juan Manuel
  organization: Universidad de las Palmas de Gran Canaria (ULPGC), Institute of Sustainable Aquaculture and Marine Ecosystems (IU-ECOAQUA), Aquaculture Research Group (GIA) Muelle de Taliarte s/n, 35214 Telde, Las Palmas de Gran Canaria, Spain
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Keywords Genetic correlation
Heritability
KET
Gilthead seabream
IMAFISH_ML
Non-invasive Technology (NiT)
Language English
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Snippet In this study, a total of 18 novel productive traits, three related to carcass [cNiT] and fifteen related to morphometric [mNiT]), were measured in gilthead...
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Publisher
StartPage 100883
SubjectTerms Genetic correlation
Gilthead seabream
Heritability
IMAFISH_ML
KET
Non-invasive Technology (NiT)
Title Genetic parameter estimations of new traits of morphological quality on gilthead seabream (Sparus aurata) by using IMAFISH_ML software
URI https://dx.doi.org/10.1016/j.aqrep.2021.100883
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