Selective Depletion of Staphylococcus aureus Restores the Skin Microbiome and Accelerates Tissue Repair after Injury

Our skin is home to a diverse community of commensal microorganisms integral to cutaneous function. However, microbial dysbiosis and barrier perturbation increase the risk of local and systemic infection. Staphylococcus aureus is a particularly problematic bacterial pathogen, with high levels of ant...

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Published in:Journal of investigative dermatology Vol. 144; no. 8; p. 1865
Main Authors: Wilkinson, Holly N, Stafford, Amber R, Rudden, Michelle, Rocha, Nina D C, Kidd, Alexandria S, Iveson, Sammi, Bell, Andrea L, Hart, Jeffrey, Duarte, Ana, Frieling, Johan, Janssen, Ferd, Röhrig, Christian, de Rooij, Bob, Ekhart, Peter F, Hardman, Matthew J
Format: Journal Article
Language:English
Published: United States 01-08-2024
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Abstract Our skin is home to a diverse community of commensal microorganisms integral to cutaneous function. However, microbial dysbiosis and barrier perturbation increase the risk of local and systemic infection. Staphylococcus aureus is a particularly problematic bacterial pathogen, with high levels of antimicrobial resistance and direct association with poor healing outcome. Innovative approaches are needed to selectively kill skin pathogens, such as S aureus, without harming the resident microbiota. In this study, we provide important data on the selectivity and efficacy of an S aureus-targeted endolysin (XZ.700) within the complex living skin/wound microbiome. Initial cross-species comparison using Nanopore long-read sequencing identified the translational potential of porcine rather than murine skin for human-relevant microbiome studies. We therefore performed an interventional study in pigs to assess the impact of endolysin administration on the microbiome. XZ.700 selectively inhibited endogenous porcine S aureus in vivo, restoring microbial diversity and promoting multiple aspects of wound repair. Subsequent mechanistic studies confirmed the importance of this microbiome modulation for effective healing in human skin. Taken together, these findings strongly support further development of S aureus-targeted endolysins for future clinical management of skin and wound infections.
AbstractList Our skin is home to a diverse community of commensal microorganisms integral to cutaneous function. However, microbial dysbiosis and barrier perturbation increase the risk of local and systemic infection. Staphylococcus aureus is a particularly problematic bacterial pathogen, with high levels of antimicrobial resistance and direct association with poor healing outcome. Innovative approaches are needed to selectively kill skin pathogens, such as S aureus, without harming the resident microbiota. In this study, we provide important data on the selectivity and efficacy of an S aureus-targeted endolysin (XZ.700) within the complex living skin/wound microbiome. Initial cross-species comparison using Nanopore long-read sequencing identified the translational potential of porcine rather than murine skin for human-relevant microbiome studies. We therefore performed an interventional study in pigs to assess the impact of endolysin administration on the microbiome. XZ.700 selectively inhibited endogenous porcine S aureus in vivo, restoring microbial diversity and promoting multiple aspects of wound repair. Subsequent mechanistic studies confirmed the importance of this microbiome modulation for effective healing in human skin. Taken together, these findings strongly support further development of S aureus-targeted endolysins for future clinical management of skin and wound infections.
Author Duarte, Ana
Stafford, Amber R
Hardman, Matthew J
Janssen, Ferd
Röhrig, Christian
Rocha, Nina D C
Kidd, Alexandria S
Wilkinson, Holly N
Bell, Andrea L
de Rooij, Bob
Frieling, Johan
Hart, Jeffrey
Rudden, Michelle
Ekhart, Peter F
Iveson, Sammi
Author_xml – sequence: 1
  givenname: Holly N
  surname: Wilkinson
  fullname: Wilkinson, Holly N
  email: h.n.wilkinson@hull.ac.uk
  organization: Biomedical Institute for Multimorbidity, Centre for Biomedicine, Hull York Medical School, The University of Hull, Hull, United Kingdom; Skin Research Centre, Hull York Medical School, The University of York, Heslington, United Kingdom. Electronic address: h.n.wilkinson@hull.ac.uk
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  givenname: Amber R
  surname: Stafford
  fullname: Stafford, Amber R
  organization: Biomedical Institute for Multimorbidity, Centre for Biomedicine, Hull York Medical School, The University of Hull, Hull, United Kingdom
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  givenname: Michelle
  surname: Rudden
  fullname: Rudden, Michelle
  organization: Biomedical Institute for Multimorbidity, Centre for Biomedicine, Hull York Medical School, The University of Hull, Hull, United Kingdom; Skin Research Centre, Hull York Medical School, The University of York, Heslington, United Kingdom
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  givenname: Nina D C
  surname: Rocha
  fullname: Rocha, Nina D C
  organization: Biomedical Institute for Multimorbidity, Centre for Biomedicine, Hull York Medical School, The University of Hull, Hull, United Kingdom
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  givenname: Alexandria S
  surname: Kidd
  fullname: Kidd, Alexandria S
  organization: Biomedical Institute for Multimorbidity, Centre for Biomedicine, Hull York Medical School, The University of Hull, Hull, United Kingdom
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  givenname: Sammi
  surname: Iveson
  fullname: Iveson, Sammi
  organization: Biomedical Institute for Multimorbidity, Centre for Biomedicine, Hull York Medical School, The University of Hull, Hull, United Kingdom
– sequence: 7
  givenname: Andrea L
  surname: Bell
  fullname: Bell, Andrea L
  organization: Cica Biomedical, Knaresborough, United Kingdom
– sequence: 8
  givenname: Jeffrey
  surname: Hart
  fullname: Hart, Jeffrey
  organization: Cica Biomedical, Knaresborough, United Kingdom
– sequence: 9
  givenname: Ana
  surname: Duarte
  fullname: Duarte, Ana
  organization: Micreos Pharma B.V., Bilthoven, The Netherlands
– sequence: 10
  givenname: Johan
  surname: Frieling
  fullname: Frieling, Johan
  organization: Micreos Pharma B.V., Bilthoven, The Netherlands
– sequence: 11
  givenname: Ferd
  surname: Janssen
  fullname: Janssen, Ferd
  organization: Micreos Pharma B.V., Bilthoven, The Netherlands
– sequence: 12
  givenname: Christian
  surname: Röhrig
  fullname: Röhrig, Christian
  organization: Micreos Pharma B.V., Bilthoven, The Netherlands
– sequence: 13
  givenname: Bob
  surname: de Rooij
  fullname: de Rooij, Bob
  organization: Micreos Pharma B.V., Bilthoven, The Netherlands
– sequence: 14
  givenname: Peter F
  surname: Ekhart
  fullname: Ekhart, Peter F
  organization: InnoPact B.V., Ouderkerk aan de Amstel, The Netherlands
– sequence: 15
  givenname: Matthew J
  surname: Hardman
  fullname: Hardman, Matthew J
  organization: Biomedical Institute for Multimorbidity, Centre for Biomedicine, Hull York Medical School, The University of Hull, Hull, United Kingdom; Skin Research Centre, Hull York Medical School, The University of York, Heslington, United Kingdom
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Keywords Infection
Endolysin
Skin
Wound healing
Microbiome
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License Copyright © 2024 The Authors. Published by Elsevier Inc. All rights reserved.
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Snippet Our skin is home to a diverse community of commensal microorganisms integral to cutaneous function. However, microbial dysbiosis and barrier perturbation...
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SubjectTerms Animals
Disease Models, Animal
Endopeptidases
Female
Humans
Mice
Microbiota - drug effects
Skin - microbiology
Staphylococcal Infections - drug therapy
Staphylococcal Infections - microbiology
Staphylococcus aureus - drug effects
Swine
Wound Healing - drug effects
Title Selective Depletion of Staphylococcus aureus Restores the Skin Microbiome and Accelerates Tissue Repair after Injury
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