EucaMaps: linking genetic maps and associated QTLs to the Eucalyptus grandis genome
EucaMaps is a web-based application that provides genetic linkage maps of Eucalyptus and Corymbia species, their orthologous relationships and the position of 267 published QTLs, hyperlinked to the Eucalyptus grandis genome sequence of BRASUZ1. EucaMaps makes an ideal springboard to relate results o...
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| Published in: | Tree genetics & genomes Vol. 11; no. 1; pp. 1 - 7 |
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| Main Authors: | , , |
| Format: | Journal Article |
| Language: | English |
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Berlin/Heidelberg
Springer-Verlag
01-02-2015
Springer Berlin Heidelberg Springer Nature B.V Springer Verlag |
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| Abstract | EucaMaps is a web-based application that provides genetic linkage maps of Eucalyptus and Corymbia species, their orthologous relationships and the position of 267 published QTLs, hyperlinked to the Eucalyptus grandis genome sequence of BRASUZ1. EucaMaps makes an ideal springboard to relate results on the genetic architecture of several quantitative traits with genomic information using the circular vizualization tool of Circos. Five classes of QTLs (growth, wood quality, tolerance to biotic and abiotic stresses, leaf chemicals, rooting ability) are presented in this web-based application providing a broad overview of major QTL regions in the seven species considered. |
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| AbstractList | EucaMaps is a web-based application that provides genetic linkage maps of Eucalyptus and Corymbia species, their orthologous relationships and the position of 267 published QTLs, hyperlinked to the Eucalyptus grandis genome sequence of BRASUZ1. EucaMaps makes an ideal springboard to relate results on the genetic architecture of several quantitative traits with genomic information using the circular vizualization tool of Circos. Five classes of QTLs (growth, wood quality, tolerance to biotic and abiotic stresses, leaf chemicals, rooting ability) are presented in this web-based application providing a broad overview of major QTL regions in the seven species considered. EucaMaps is a web-based application that provides genetic linkage maps of Eucalyptus and Corymbia species, their orthologous relationships and the position of 267 published QTLs, hyperlinked to the Eucalyptus grandis genome sequence of BRASUZ1. EucaMaps makes an ideal springboard to relate results on the genetic architecture of several quantitative traits with genomic information using the circular vizualization tool of Circos. Five classes of QTLs (growth, wood quality, tolerance to biotic and abiotic stresses, leaf chemicals, rooting ability) are presented in this web-based application providing a broad overview of major QTL regions in the seven species considered. |
| ArticleNumber | 795 |
| Author | Plomion, C Chaumeil, P Gion, Jean-Marc |
| Author_xml | – sequence: 1 fullname: Gion, Jean-Marc – sequence: 2 fullname: Chaumeil, P – sequence: 3 fullname: Plomion, C |
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| CitedBy_id | crossref_primary_10_3389_fpls_2016_00510 crossref_primary_10_5424_fs_2020293_17074 |
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| Keywords | QTL Comparative mapping Genome Web-based application genome web-based application corymbia comparative mapping eucalyptus |
| Language | English |
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| Snippet | EucaMaps is a web-based application that provides genetic linkage maps of Eucalyptus and Corymbia species, their orthologous relationships and the position of... EucaMaps is a web-based application that provides genetic linkage maps of Eucalyptus and Corymbia species, their orthologous relationships and the position of... |
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| SubjectTerms | Abiotic stress Biomedical and Life Sciences Biotechnology chromosome mapping Corymbia Eucalyptus grandis Forestry Genetics genome Genomes genomics Internet leaves Life Sciences nucleotide sequences Plant Breeding/Biotechnology Plant Genetics and Genomics quantitative trait loci quantitative traits rooting Short Communication Tree Biology wood quality |
| Title | EucaMaps: linking genetic maps and associated QTLs to the Eucalyptus grandis genome |
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