Vegetation unit assignments: phytosociology experts and classification programs show similar performance but low convergence
Aims Assigning vegetation plots to vegetation units is a key step in biodiversity management projects. Nevertheless, the process of plot assignment to types is usually non‐standardized, and assignment consistency remains poorly explored. To date, the efficiency of automatic classification programs h...
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Published in: | Applied vegetation science Vol. 23; no. 4; pp. 698 - 709 |
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Main Authors: | , , , , , , , , , |
Format: | Journal Article |
Language: | English |
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01-10-2020
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Abstract | Aims
Assigning vegetation plots to vegetation units is a key step in biodiversity management projects. Nevertheless, the process of plot assignment to types is usually non‐standardized, and assignment consistency remains poorly explored. To date, the efficiency of automatic classification programs has been assessed by comparing them with a unique expert judgment. Therefore, we investigated the consistency of five phytosociology expert judgments, and the consistency of these judgements with those of automatic classification programs.
Location
Mainland France.
Methods
We used 273 vegetation plots distributed across France and covering the diversity of the temperate and mountainous forest ecosystems of Western Europe. We asked a representative panel of five French organizations with recognized expertise in phytosociology to assign each plot to vegetation units. We provided a phytosociological classification including 228 associations, 43 alliances and eight classes. The assignments were compared among experts using an agreement ratio. We then compared the assignments suggested by three automatic classification programs with the expert judgments.
Results
We observed small differences among the agreement ratios of the expert organizations; a given expert organization agreed with another one on association assignment one time in four on average, and one time in two on alliance assignment. The agreement ratios of the automatic classification programs were globally lower, but close to expert judgments.
Conclusions
The results support the current trend toward unifying the existing classifications and specifying the assignment rules by creating guiding tools, which will decrease inter‐observer variation. As compared to a pool of phytosociology experts, programs perform similarly to individual experts in vegetation unit assignment, especially at the alliance level. Although programs still need to be improved, these results pave the way for the creation of habitat time series crucial for the monitoring and conservation of biodiversity.
We assessed for the first time the consistency of vegetation unit assignments by five experts and three automatic classification programs. We observed a lack of consistency among experts, and programs performed quite similarly as experts did. The results support the current trend toward unifying the existing classifications, and pave the way for the creation of habitat time series crucial for monitoring. |
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AbstractList | Aims
Assigning vegetation plots to vegetation units is a key step in biodiversity management projects. Nevertheless, the process of plot assignment to types is usually non‐standardized, and assignment consistency remains poorly explored. To date, the efficiency of automatic classification programs has been assessed by comparing them with a unique expert judgment. Therefore, we investigated the consistency of five phytosociology expert judgments, and the consistency of these judgements with those of automatic classification programs.
Location
Mainland France.
Methods
We used 273 vegetation plots distributed across France and covering the diversity of the temperate and mountainous forest ecosystems of Western Europe. We asked a representative panel of five French organizations with recognized expertise in phytosociology to assign each plot to vegetation units. We provided a phytosociological classification including 228 associations, 43 alliances and eight classes. The assignments were compared among experts using an agreement ratio. We then compared the assignments suggested by three automatic classification programs with the expert judgments.
Results
We observed small differences among the agreement ratios of the expert organizations; a given expert organization agreed with another one on association assignment one time in four on average, and one time in two on alliance assignment. The agreement ratios of the automatic classification programs were globally lower, but close to expert judgments.
Conclusions
The results support the current trend toward unifying the existing classifications and specifying the assignment rules by creating guiding tools, which will decrease inter‐observer variation. As compared to a pool of phytosociology experts, programs perform similarly to individual experts in vegetation unit assignment, especially at the alliance level. Although programs still need to be improved, these results pave the way for the creation of habitat time series crucial for the monitoring and conservation of biodiversity.
We assessed for the first time the consistency of vegetation unit assignments by five experts and three automatic classification programs. We observed a lack of consistency among experts, and programs performed quite similarly as experts did. The results support the current trend toward unifying the existing classifications, and pave the way for the creation of habitat time series crucial for monitoring. AimsAssigning vegetation plots to vegetation units is a key step in biodiversity management projects. Nevertheless, the process of plot assignment to types is usually non‐standardized, and assignment consistency remains poorly explored. To date, the efficiency of automatic classification programs has been assessed by comparing them with a unique expert judgment. Therefore, we investigated the consistency of five phytosociology expert judgments, and the consistency of these judgements with those of automatic classification programs.LocationMainland France.MethodsWe used 273 vegetation plots distributed across France and covering the diversity of the temperate and mountainous forest ecosystems of Western Europe. We asked a representative panel of five French organizations with recognized expertise in phytosociology to assign each plot to vegetation units. We provided a phytosociological classification including 228 associations, 43 alliances and eight classes. The assignments were compared among experts using an agreement ratio. We then compared the assignments suggested by three automatic classification programs with the expert judgments.ResultsWe observed small differences among the agreement ratios of the expert organizations; a given expert organization agreed with another one on association assignment one time in four on average, and one time in two on alliance assignment. The agreement ratios of the automatic classification programs were globally lower, but close to expert judgments.ConclusionsThe results support the current trend toward unifying the existing classifications and specifying the assignment rules by creating guiding tools, which will decrease inter‐observer variation. As compared to a pool of phytosociology experts, programs perform similarly to individual experts in vegetation unit assignment, especially at the alliance level. Although programs still need to be improved, these results pave the way for the creation of habitat time series crucial for the monitoring and conservation of biodiversity. Aims: Assigning vegetation plots to vegetation units is a key step in biodiversity management projects. Nevertheless, the process of plot assignment to types is usually non-standardized, and assignment consistency remains poorly explored. To date, the efficiency of automatic classification programs has been assessed by comparing them with a unique expert judgment. Therefore, we investigated the consistency of five phytosociology expert judgments, and the consistency of these judgements with those of automatic classification programs.Location: Mainland France.Methods: We used 273 vegetation plots distributed across France and covering the diversity of the temperate and mountainous forest ecosystems of Western Europe. We asked a representative panel of five French organizations with recognized expertise in phytosociology to assign each plot to vegetation units. We provided a phytosociological classification including 228 associations, 43 alliances and eight classes. The assignments were compared among experts using an agreement ratio. We then compared the assignments suggested by three automatic classification programs with the expert judgments.Results: We observed small differences among the agreement ratios of the expert organizations; a given expert organization agreed with another one on association assignment one time in four on average, and one time in two on alliance assignment. The agreement ratios of the automatic classification programs were globally lower, but close to expert judgments.Conclusions: The results support the current trend toward unifying the existing classifications and specifying the assignment rules by creating guiding tools, which will decrease inter-observer variation. As compared to a pool of phytosociology experts, programs perform similarly to individual experts in vegetation unit assignment, especially at the alliance level. Although programs still need to be improved, these results pave the way for the creation of habitat time series crucial for the monitoring and conservation of biodiversity. |
Author | Maciejewski, Lise Wurpillot, Stéphanie Drapier, Jacques Muller, Serge Jiménez‐Alfaro, Borja Cadet, Serge Agou, Pierre Pinto, Paulina E. Renaux, Benoît Gégout, Jean‐Claude |
Author_xml | – sequence: 1 givenname: Lise orcidid: 0000-0002-9142-0507 surname: Maciejewski fullname: Maciejewski, Lise email: lise.maciejewski@agroparistech.fr organization: UMS Patrinat – sequence: 2 givenname: Paulina E. surname: Pinto fullname: Pinto, Paulina E. organization: UMR Silva – sequence: 3 givenname: Stéphanie surname: Wurpillot fullname: Wurpillot, Stéphanie organization: IGN (Institut National de l’Information Géographique et Forestière) – sequence: 4 givenname: Jacques surname: Drapier fullname: Drapier, Jacques organization: IGN (Institut National de l’Information Géographique et Forestière) – sequence: 5 givenname: Serge surname: Cadet fullname: Cadet, Serge organization: ONF (Office national des forêts) – sequence: 6 givenname: Serge orcidid: 0000-0002-4545-9427 surname: Muller fullname: Muller, Serge organization: UMR 7205 ISYEB – sequence: 7 givenname: Pierre surname: Agou fullname: Agou, Pierre organization: Biotope, Centre Bourgogne – sequence: 8 givenname: Benoît surname: Renaux fullname: Renaux, Benoît organization: Conservatoire botanique national du Massif Central – sequence: 9 givenname: Jean‐Claude orcidid: 0000-0002-5760-9920 surname: Gégout fullname: Gégout, Jean‐Claude organization: UMR Silva – sequence: 10 givenname: Borja surname: Jiménez‐Alfaro fullname: Jiménez‐Alfaro, Borja |
BackLink | https://hal.science/hal-03048253$$DView record in HAL |
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CitedBy_id | crossref_primary_10_1007_s10531_022_02487_6 crossref_primary_10_1186_s13595_022_01160_w crossref_primary_10_1007_s10531_021_02310_8 crossref_primary_10_1111_avsc_12540 crossref_primary_10_1111_avsc_12650 crossref_primary_10_1007_s13595_020_01017_0 |
Cites_doi | 10.1007/s11258-004-5798-8 10.1016/j.jenvman.2010.11.021 10.1111/j.2041-210x.2012.00258.x 10.1111/j.1654-1103.2009.01081.x 10.1016/j.ecolind.2016.05.047 10.1111/avsc.12368 10.1111/jvs.12696 10.1111/j.1654-1103.2003.tb02187.x 10.1046/j.1365-2664.1999.00458.x 10.1127/phyto/2018/0293 10.1111/j.1654-1103.2011.01337.x 10.1127/phyto/2017/0181 10.1111/j.1654-1103.2005.tb02380.x 10.1890/1051-0761(2006)016[1449:RTSICP]2.0.CO;2 10.1111/jvs.12193 10.1890/0012-9615(1997)067[0345:SAAIST]2.0.CO;2 10.1111/avsc.12257 10.1127/phyto/2018/0256 10.1007/BF00225007 10.1093/jpe/rtv077 10.1080/12538078.2014.972978 10.3170/2008-8-18402 10.1007/978-3-319-44015-6_20 10.1080/09640568.2015.1090961 10.1007/BF00158550 10.1111/j.1654-1103.2007.tb02553.x 10.3170/2008-8-18423 10.1111/avsc.12271 10.1016/j.jenvman.2004.05.009 10.1111/j.1654-1103.2002.tb02025.x 10.1007/s12210-018-0690-y 10.1111/j.1654-1103.2006.tb02449.x |
ContentType | Journal Article |
Copyright | 2020 International Association for Vegetation Science Copyright © 2020 International Association for Vegetation Science Distributed under a Creative Commons Attribution 4.0 International License |
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Issue | 4 |
Keywords | vegetation typology forest ecosystem habitat phytosociology vegetation classification Natura 2000 |
Language | English |
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Notes | Funding information This study was supported by the French National Institute for Agricultural Research (Forest Grassland and Freshwater Ecology Department, EFPA) through the ONF‐INRA Interface Grant “Station, distribution, croissance et choix des essences dans un contexte environnemental changeant”, by the French National Research Agency (ANR) through the Laboratory of Excellence ARBRE (ANR‐ 12‐LABXARBRE‐01), and by the Regional Council of Lorraine through the project “Contribution à l'identification et à la cartographie à fine résolution des zones humides forestières à l'aide du caractère hygrophile des plantes”. |
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PublicationDate | October 2020 |
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Publisher | Wiley Subscription Services, Inc Wiley |
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Assigning vegetation plots to vegetation units is a key step in biodiversity management projects. Nevertheless, the process of plot assignment to types is... AimsAssigning vegetation plots to vegetation units is a key step in biodiversity management projects. Nevertheless, the process of plot assignment to types is... Aims: Assigning vegetation plots to vegetation units is a key step in biodiversity management projects. Nevertheless, the process of plot assignment to types... |
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SubjectTerms | Automatic classification Biodiversity Biodiversity and Ecology Classification Consistency Environmental Sciences forest ecosystem Forest ecosystems habitat Natura 2000 Organizations Phytosociology Project management Terrestrial ecosystems Vegetation vegetation classification vegetation typology Wildlife conservation |
Title | Vegetation unit assignments: phytosociology experts and classification programs show similar performance but low convergence |
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