Vibrio palustris sp. nov. and Vibrio spartinae sp. nov., two novel members of the Gazogenes clade, isolated from salt-marsh plants (Arthrocnemum macrostachyum and Spartina maritima)
Two bacterial strains, EAod9T and SMJ21T, isolated from salt-marsh plants, were determined to be related to species of the genus Vibriofrom from 16S rRNA sequence comparisons. Their closest phylogenetic relatives are members of the Gazogenes clade, Vibrio mangrovi and Vibrio rhizosphaerae , which sh...
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Published in: | International journal of systematic and evolutionary microbiology Vol. 67; no. 9; pp. 3506 - 3512 |
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01-09-2017
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Abstract | Two bacterial strains, EAod9T and SMJ21T, isolated from salt-marsh plants, were determined to be related to species of the genus Vibriofrom from 16S rRNA sequence comparisons. Their closest phylogenetic relatives are members of the Gazogenes clade, Vibrio mangrovi and Vibrio rhizosphaerae , which show the greatest similarity to the SMJ21TrRNA sequence (97.3 and 97.1 %, respectively), while EAod9T had less than 97.0 % similarity to any other species of the genus Vibrio. Both strains share the basic characteristics of the genus Vibrio, as they are Gram-stain negative, motile, slightly halophilic, facultatively anaerobic bacteria. In addition, they are oxidase-negative and unable to grow on TCBS Agar; they grow between 15 to 26 °C, pH 6 to 8 and in up to 10 % (w/v) total salinity. They produce indol, are positive in the Voges-Proskauer test and are negative for arginine dihydrolase, lysine and ornithine decarboxylases. Strain SMJ21T is aerogenic and red-pigmented, due to prodigiosin production, while strain EAod9T ferments glucose without gas and is not pigmented. The major cellular fatty acids of both novel strains were C16 : 1ω7c/C16 : 1ω6c and C16 : 0. WGSobtained for both strains, along with the other five members of the clade, allowed the determination of ANI indexes and in silico estimations of DDH values, which confirmed that the two strains represent two novel species of the genus Vibrio: Vibriopalustris sp. nov. (with EAod9T=CECT 9027T=LMG 29724T as the proposed type strain) and Vibrio spartinae sp. nov. (with SMJ21T=CECT 9026T=LMG 29723T as the proposed type strain). |
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AbstractList | Two bacterial strains, EAod9T and SMJ21T, isolated from salt-marsh plants, were determined to be related to species of the genus Vibriofrom from 16S rRNA sequence comparisons. Their closest phylogenetic relatives are members of the Gazogenes clade, Vibrio mangrovi and Vibrio rhizosphaerae , which show the greatest similarity to the SMJ21TrRNA sequence (97.3 and 97.1 %, respectively), while EAod9T had less than 97.0 % similarity to any other species of the genus Vibrio. Both strains share the basic characteristics of the genus Vibrio, as they are Gram-stain negative, motile, slightly halophilic, facultatively anaerobic bacteria. In addition, they are oxidase-negative and unable to grow on TCBS Agar; they grow between 15 to 26 °C, pH 6 to 8 and in up to 10 % (w/v) total salinity. They produce indol, are positive in the Voges-Proskauer test and are negative for arginine dihydrolase, lysine and ornithine decarboxylases. Strain SMJ21T is aerogenic and red-pigmented, due to prodigiosin production, while strain EAod9T ferments glucose without gas and is not pigmented. The major cellular fatty acids of both novel strains were C16 : 1ω7c/C16 : 1ω6c and C16 : 0. WGSobtained for both strains, along with the other five members of the clade, allowed the determination of ANI indexes and in silico estimations of DDH values, which confirmed that the two strains represent two novel species of the genus Vibrio: Vibriopalustris sp. nov. (with EAod9T=CECT 9027T=LMG 29724T as the proposed type strain) and Vibrio spartinae sp. nov. (with SMJ21T=CECT 9026T=LMG 29723T as the proposed type strain). |
Author | Navarro-Torre, Salvadora Pujalte, María J Mesa, Jennifer Piñar, María J Arahal, David R Rodrigo-Torres, Lidia Pajuelo, Eloísa Lucena, Teresa Ruvira, María A Rodriguez-Llorente, Ignacio D |
Author_xml | – sequence: 1 givenname: Teresa surname: Lucena fullname: Lucena, Teresa organization: 1Departamento de Microbiología y Ecología & Colección Española de Cultivos Tipo (CECT), Universitat de València, Spain – sequence: 2 givenname: David R surname: Arahal fullname: Arahal, David R organization: 1Departamento de Microbiología y Ecología & Colección Española de Cultivos Tipo (CECT), Universitat de València, Spain – sequence: 3 givenname: María A surname: Ruvira fullname: Ruvira, María A organization: 1Departamento de Microbiología y Ecología & Colección Española de Cultivos Tipo (CECT), Universitat de València, Spain – sequence: 4 givenname: Salvadora surname: Navarro-Torre fullname: Navarro-Torre, Salvadora organization: 2Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, Spain – sequence: 5 givenname: Jennifer surname: Mesa fullname: Mesa, Jennifer organization: 2Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, Spain – sequence: 6 givenname: Eloísa surname: Pajuelo fullname: Pajuelo, Eloísa organization: 2Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, Spain – sequence: 7 givenname: Ignacio D surname: Rodriguez-Llorente fullname: Rodriguez-Llorente, Ignacio D organization: 2Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, Spain – sequence: 8 givenname: Lidia surname: Rodrigo-Torres fullname: Rodrigo-Torres, Lidia organization: 1Departamento de Microbiología y Ecología & Colección Española de Cultivos Tipo (CECT), Universitat de València, Spain – sequence: 9 givenname: María J surname: Piñar fullname: Piñar, María J organization: 1Departamento de Microbiología y Ecología & Colección Española de Cultivos Tipo (CECT), Universitat de València, Spain – sequence: 10 givenname: María J surname: Pujalte fullname: Pujalte, María J organization: 1Departamento de Microbiología y Ecología & Colección Española de Cultivos Tipo (CECT), Universitat de València, Spain |
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CitedBy_id | crossref_primary_10_1021_acs_jnatprod_9b01159 crossref_primary_10_1016_j_drudis_2020_03_017 crossref_primary_10_3390_app122110854 crossref_primary_10_1007_s10482_021_01567_x crossref_primary_10_1016_j_apsoil_2020_103532 crossref_primary_10_1016_j_envexpbot_2023_105397 crossref_primary_10_1099_ijsem_0_003308 crossref_primary_10_1002_pro_4500 crossref_primary_10_1007_s10482_022_01768_y crossref_primary_10_1007_s10482_017_1013_5 crossref_primary_10_1099_ijsem_0_005866 |
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SubjectTerms | Amaranthaceae - microbiology Bacterial Typing Techniques Base Composition DNA, Bacterial - genetics Fatty Acids - chemistry Phylogeny Pigmentation Poaceae - microbiology RNA, Ribosomal, 16S - genetics Salt-Tolerant Plants - microbiology Sequence Analysis, DNA Spain Vibrio - classification Vibrio - genetics Vibrio - isolation & purification Wetlands |
Title | Vibrio palustris sp. nov. and Vibrio spartinae sp. nov., two novel members of the Gazogenes clade, isolated from salt-marsh plants (Arthrocnemum macrostachyum and Spartina maritima) |
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