Approach to the comprehensive analysis of glycoproteins isolated from human serum using a multi-lectin affinity column

Glycosylation is one the most common post-translational modifications (PTM) and glycoproteins play fundamental roles in a diversity of biological processes. The development of an analytical approach to the study of variation of glycosylation patterns in serum samples has been hindered by the structu...

Full description

Saved in:
Bibliographic Details
Published in:Journal of Chromatography A Vol. 1053; no. 1; pp. 79 - 88
Main Authors: Yang, Ziping, Hancock, William S.
Format: Journal Article
Language:English
Published: Elsevier B.V 22-10-2004
Subjects:
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
Abstract Glycosylation is one the most common post-translational modifications (PTM) and glycoproteins play fundamental roles in a diversity of biological processes. The development of an analytical approach to the study of variation of glycosylation patterns in serum samples has been hindered by the structural heterogeneity of this post-translational modification and the complexity of serum proteome. We have used the ability of different lectins to recognize specific glycosylation motifs to develop a specific affinity system that can achieve a comprehensive capture of serum glycoproteins. In a preliminary investigation, we evaluated the ability of five commonly used immobilized lectins to capture glycoproteins from human serum. SDS-PAGE analysis showed each lectin was able to enrich a subset of the serum glycoproteome and overlaps in lectin specificity were indeed observed. Based on these results and with the goal of studying the extent of the human serum glycoproteome, we then developed a multi-lectin affinity column containing Concanavalin A (Con A), Wheat germ and Jacalin lectin. The selection of lectins was also based on the known N-linked and O-linked glycan structures that are considered representative of the serum proteome. We then demonstrated that the capture of glycoproteins was specific, efficient and reproducible with this multi-lectin column. The results obtained with this affinity step indicated that about 10% of human serum proteins are glycosylated (weight/weight) and, after removal of six high abundance proteins, including albumin, at least 50% of the remaining proteins were glycosylated. We then evaluated the use of this affinity column to monitor changes in the pattern of glycosylation in serum samples by a controlled, stepwise release of the captured proteins from the multi-lectin affinity column with specific displacers.
AbstractList Glycosylation is one the most common post-translational modifications (PTM) and glycoproteins play fundamental roles in a diversity of biological processes. The development of an analytical approach to the study of variation of glycosylation patterns in serum samples has been hindered by the structural heterogeneity of this post-translational modification and the complexity of serum proteome. We have used the ability of different lectins to recognize specific glycosylation motifs to develop a specific affinity system that can achieve a comprehensive capture of serum glycoproteins. In a preliminary investigation, we evaluated the ability of five commonly used immobilized lectins to capture glycoproteins from human serum. SDS-PAGE analysis showed each lectin was able to enrich a subset of the serum glycoproteome and overlaps in lectin specificity were indeed observed. Based on these results and with the goal of studying the extent of the human serum glycoproteome, we then developed a multi-lectin affinity column containing Concanavalin A (Con A), Wheat germ and Jacalin lectin. The selection of lectins was also based on the known N-linked and O-linked glycan structures that are considered representative of the serum proteome. We then demonstrated that the capture of glycoproteins was specific, efficient and reproducible with this multi-lectin column. The results obtained with this affinity step indicated that about 10% of human serum proteins are glycosylated (weight/weight) and, after removal of six high abundance proteins, including albumin, at least 50% of the remaining proteins were glycosylated. We then evaluated the use of this affinity column to monitor changes in the pattern of glycosylation in serum samples by a controlled, stepwise release of the captured proteins from the multi-lectin affinity column with specific displacers.
Author Yang, Ziping
Hancock, William S.
Author_xml – sequence: 1
  givenname: Ziping
  surname: Yang
  fullname: Yang, Ziping
– sequence: 2
  givenname: William S.
  surname: Hancock
  fullname: Hancock, William S.
  email: wi.hancock@neu.edu
BookMark eNotkMtqwzAURLVIoUnbP-hCP2D3yrb82BRC6AsC3bRrIUtXsYIsBUsO5O_rkK5mMcPMcDZk5YNHQp4Z5AxY_XLM1TCFUeYFQJVDmzMOK7IGKFjW1U15TzYxHgFYA02xJuft6TQFqQaaAk0DUhXG04QD-mjPSKWX7hJtpMHQg7uosIQTWh-pjcHJhJqaZY0O8yg9jTjNI52j9Qcq6Ti7ZDOHKllPpTHW23RZ-t08-kdyZ6SL-PSvD-T3_e1n95ntvz--dtt9psqCp6yGTjLWqLoCzjXreVP1bdvJnmFZVEbXbYc9mJ6ZQhWaL16DzJSN5iXvtJLlA3m99eIycrY4iagseoXaTssxoYMVDMSVnDiKGzlxJSegFQu58g_pVGvC
CitedBy_id crossref_primary_10_1016_j_aca_2012_10_002
crossref_primary_10_1007_s12032_012_0420_8
crossref_primary_10_2478_v10011_011_0023_5
crossref_primary_10_1016_j_bbapap_2006_10_007
crossref_primary_10_1016_j_jprot_2012_03_050
crossref_primary_10_1039_c3ra42960a
crossref_primary_10_1016_j_jchromb_2006_07_067
crossref_primary_10_1007_s12562_014_0801_3
crossref_primary_10_1016_j_chroma_2014_10_107
crossref_primary_10_1016_j_fsi_2013_04_050
crossref_primary_10_1007_s00216_012_5712_5
crossref_primary_10_1016_S1875_5364_15_60002_4
crossref_primary_10_1016_j_chroma_2013_05_037
crossref_primary_10_1016_j_chroma_2008_10_036
crossref_primary_10_1016_j_jchromb_2006_10_040
crossref_primary_10_1016_j_bbapap_2012_06_006
crossref_primary_10_1039_c2mb25268f
crossref_primary_10_1007_s10719_012_9438_6
crossref_primary_10_1002_cjoc_201190166
crossref_primary_10_1016_j_jprot_2009_02_001
crossref_primary_10_1016_j_jchromb_2006_09_041
crossref_primary_10_1016_j_trac_2007_01_018
crossref_primary_10_1016_j_chroma_2005_02_034
crossref_primary_10_1016_j_jprot_2008_06_013
crossref_primary_10_1016_j_jprot_2008_06_011
crossref_primary_10_1007_s00216_008_2257_8
crossref_primary_10_1016_j_ymeth_2011_12_004
crossref_primary_10_1080_10826070903426843
crossref_primary_10_1016_j_jchromb_2006_10_056
crossref_primary_10_1016_j_ddtec_2006_03_002
crossref_primary_10_3389_fpls_2014_00627
crossref_primary_10_1016_j_chroma_2009_09_029
crossref_primary_10_1039_c2ay25510c
ContentType Journal Article
Copyright 2004 Elsevier B.V.
Copyright_xml – notice: 2004 Elsevier B.V.
DOI 10.1016/j.chroma.2004.08.150
DatabaseTitleList
DeliveryMethod fulltext_linktorsrc
Discipline Chemistry
EndPage 88
ExternalDocumentID S0021967304014335
GroupedDBID ---
--K
--M
-~X
.GJ
.~1
0R~
1B1
1RT
1~.
1~5
29K
4.4
457
4G.
53G
5GY
5RE
5VS
7-5
71M
8P~
9JN
AABNK
AACTN
AAEDT
AAEDW
AAIAV
AAIKJ
AAKOC
AALRI
AAOAW
AAQFI
AARLI
AAXUO
AAYJJ
ABFNM
ABFRF
ABJNI
ABMAC
ABXDB
ABYKQ
ACDAQ
ACGFO
ACGFS
ACNNM
ACRLP
ADBBV
ADECG
ADEZE
AEBSH
AEFWE
AEKER
AENEX
AFKWA
AFTJW
AFZHZ
AGHFR
AGUBO
AGYEJ
AHHHB
AHPSJ
AI.
AIEXJ
AIKHN
AITUG
AJBFU
AJOXV
AJQLL
AJSZI
ALMA_UNASSIGNED_HOLDINGS
AMFUW
AMRAJ
ASPBG
AVWKF
AXJTR
AZFZN
BKOJK
BLXMC
D-I
DU5
EBS
EFJIC
EFLBG
EJD
EO8
EO9
EP2
EP3
F5P
FDB
FEDTE
FGOYB
FLBIZ
FNPLU
FYGXN
G-Q
G8K
GBLVA
HMU
HVGLF
HZ~
H~9
IH2
IHE
J1W
KOM
M36
M41
MO0
N9A
O-L
O9-
OAUVE
OHT
OZT
P-8
P-9
P2P
PC.
Q38
RIG
ROL
RPZ
SCB
SCC
SCH
SDF
SDG
SDP
SES
SEW
SPC
SPCBC
SSK
SSZ
T5K
UQL
VH1
WH7
WUQ
XFK
XPP
YK3
ZGI
ZKB
ZMT
ZXP
~02
~G-
~KM
ID FETCH-LOGICAL-c325t-609a117c64055d1b574b889ab1e324fd689eb0fb1f2c2d5b887e1f37d5359dca3
ISSN 0021-9673
IngestDate Fri Feb 23 02:29:28 EST 2024
IsPeerReviewed true
IsScholarly true
Issue 1
Keywords Multi-lectin affinity column
Glycoprotein
Proteomics
Wheat germ
Glycosylation
Concanavalin A
Jacalin lectins
Language English
LinkModel OpenURL
MergedId FETCHMERGED-LOGICAL-c325t-609a117c64055d1b574b889ab1e324fd689eb0fb1f2c2d5b887e1f37d5359dca3
PageCount 10
ParticipantIDs elsevier_sciencedirect_doi_10_1016_j_chroma_2004_08_150
PublicationCentury 2000
PublicationDate 2004-10-22
PublicationDateYYYYMMDD 2004-10-22
PublicationDate_xml – month: 10
  year: 2004
  text: 2004-10-22
  day: 22
PublicationDecade 2000
PublicationTitle Journal of Chromatography A
PublicationYear 2004
Publisher Elsevier B.V
Publisher_xml – name: Elsevier B.V
References Goochee, Monica (bib4) 1990; 8
Rudd, Elliott, Cresswell, Wilson, Dwek (bib2) 2001; 291
Leak, Petricoin, Jones, Paweletz, Ardekani, Fusaro, Ross, Liotta (bib21) 2002; 979
C.L. Nilsson, Anal. Chem. A-Page (2003) 348A.
Wu, Amato, Biringer, Choudhary, Shieh, Hancock (bib16) 2002; 1
Schwarz, Puri, Bhat, Surolia (bib13) 1993; 268
Brooks, Dwek, Schumacher (bib14) 2002
Bertozzi, Kiessling (bib1) 2001; 291
Anderson, Anderson (bib7) 1998; 19
Padley, Bashir, Wood (bib25) 1997; 69
Xiong, Andrews, Regnier (bib9) 2003; 2
Goswami, Nandakumar, Koner, Bobby, Sen (bib24) 2003; 337
Zachara, Hart (bib3) 2002; 102
Baumstark (bib17) 1983; 13
Bakry, Kamata, Simpson (bib11) 1991; 258
Steel, Shumpert, Trotter, Seeholzer, Evans, London, Dwek, Block (bib20) 2003; 3
Pahlsson, Blackall, Ugorski, Czerwinski, Spitalnik (bib15) 1994; 11
Saulsbury (bib12) 1997; 24
Pieper, Su, Gatlin, Huang, Anderson, Steiner (bib19) 2003; 3
Alper (bib5) 2003; 301
Petersen, Jensen, Bukh, Sunde, Lamm, Ingerslev (bib18) 1990; 50
Srinivas, Srivastava, Hanash, Wright (bib22) 2001; 47
Seelenmeyer, Wegehingel, Lechner, Nickel (bib6) 2003; 116
Butler, Quelhas, Critchley, Carchon, Hebestreit, Hibbert, Vilarinho, Teles, Matthijs, Schollen, Argibay, Harvey, Dwek, Jaeken, Rudd (bib23) 2003; 13
Becker, Reeke, Wang, Cunningham, Edelman (bib10) 1975; 250
References_xml – volume: 102
  start-page: 431
  year: 2002
  ident: bib3
  publication-title: Chem. Rev.
  contributor:
    fullname: Hart
– volume: 13
  start-page: 601
  year: 2003
  ident: bib23
  publication-title: Glycobiology
  contributor:
    fullname: Rudd
– volume: 3
  start-page: 422
  year: 2003
  ident: bib19
  publication-title: Proteomics
  contributor:
    fullname: Steiner
– volume: 3
  start-page: 601
  year: 2003
  ident: bib20
  publication-title: Proteomics
  contributor:
    fullname: Block
– year: 2002
  ident: bib14
  article-title: Functional & Molecular Glycobiology
  contributor:
    fullname: Schumacher
– volume: 116
  start-page: 1305
  year: 2003
  ident: bib6
  publication-title: J. Cell. Sci.
  contributor:
    fullname: Nickel
– volume: 47
  start-page: 1901
  year: 2001
  ident: bib22
  publication-title: Clin. Chem.
  contributor:
    fullname: Wright
– volume: 258
  start-page: 830
  year: 1991
  ident: bib11
  publication-title: J. Pharmacol. Exp. Ther.
  contributor:
    fullname: Simpson
– volume: 1
  start-page: 459
  year: 2002
  ident: bib16
  publication-title: J. Proteome Res.
  contributor:
    fullname: Hancock
– volume: 19
  start-page: 1853
  year: 1998
  ident: bib7
  publication-title: Electrophoresis
  contributor:
    fullname: Anderson
– volume: 268
  start-page: 7668
  year: 1993
  ident: bib13
  publication-title: J. Biol. Chem.
  contributor:
    fullname: Surolia
– volume: 69
  start-page: 2914
  year: 1997
  ident: bib25
  publication-title: Anal. Chem.
  contributor:
    fullname: Wood
– volume: 8
  start-page: 421
  year: 1990
  ident: bib4
  publication-title: Biotechnology (NY)
  contributor:
    fullname: Monica
– volume: 2
  start-page: 618
  year: 2003
  ident: bib9
  publication-title: J. Proteome Res.
  contributor:
    fullname: Regnier
– volume: 11
  start-page: 43
  year: 1994
  ident: bib15
  publication-title: Glycoconj J.
  contributor:
    fullname: Spitalnik
– volume: 979
  start-page: 211
  year: 2002
  ident: bib21
  publication-title: Ann. N.Y. Acad. Sci.
  contributor:
    fullname: Liotta
– volume: 337
  start-page: 163
  year: 2003
  ident: bib24
  publication-title: Clin. Chim. Acta
  contributor:
    fullname: Sen
– volume: 250
  start-page: 1513
  year: 1975
  ident: bib10
  publication-title: J. Biol. Chem.
  contributor:
    fullname: Edelman
– volume: 50
  start-page: 479
  year: 1990
  ident: bib18
  publication-title: Scand. J. Clin. Lab. Invest.
  contributor:
    fullname: Ingerslev
– volume: 13
  start-page: 15
  year: 1983
  ident: bib17
  publication-title: Prep. Biochem.
  contributor:
    fullname: Baumstark
– volume: 301
  start-page: 159
  year: 2003
  ident: bib5
  publication-title: Science
  contributor:
    fullname: Alper
– volume: 291
  start-page: 2370
  year: 2001
  ident: bib2
  publication-title: Science
  contributor:
    fullname: Dwek
– volume: 24
  start-page: 2246
  year: 1997
  ident: bib12
  publication-title: J. Rheumatol.
  contributor:
    fullname: Saulsbury
– volume: 291
  start-page: 2357
  year: 2001
  ident: bib1
  publication-title: Science
  contributor:
    fullname: Kiessling
SSID ssj0017072
ssj0029838
Score 2.3393922
Snippet Glycosylation is one the most common post-translational modifications (PTM) and glycoproteins play fundamental roles in a diversity of biological processes....
SourceID elsevier
SourceType Publisher
StartPage 79
SubjectTerms Concanavalin A
Glycoprotein
Glycosylation
Jacalin lectins
Multi-lectin affinity column
Proteomics
Wheat germ
Title Approach to the comprehensive analysis of glycoproteins isolated from human serum using a multi-lectin affinity column
URI https://dx.doi.org/10.1016/j.chroma.2004.08.150
Volume 1053
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://sdu.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1Lb9QwELa27QEuqBQQlILm0FuVKk7iODmuyqKWA5cWqXCJHMcuW9EsaneR-PfM-JHsUpAAiUu0crS7jufL-JvxPBg7LIwSqq3TpCsrlRS4oyeVNRLfK2m5lUK02rkuzuX7y-rNrJhNJoPVP4z9V0njGMqaMmf_QtrDj-IAfkaZ4xWljtc_kvv065gkRaSSYsZvzecQp67WapBcffmuF65OA4XJzHFaiuinSzjxrftwwqubo5VzJygfe5iQm39OvcXtvCcGr0m99b_huFR6FylxKIs9-k0_Bi_1J-qcfTVqwT6q5-AGOjo_3nBLFKTPs9GIvZ8vE3IHeFKXvnnJoH9TXy54A2lenfo-M3Fjrn6p8r334fpYuydyFj8VZeW-nu1PxbTpbJrTBFB3IVPMxRbbyVBFoYbcmZ7NLt8NJ1AylUMdsqyucr-lh-nHHEwXKHj_j9eIzRpZudhlj4IEYOrh8ZhNTL_HHpzE5n5P2LcIE1guAGECGzCBCBNYWNiACUSYAMEEHEzAwQQcTEDBOkwgwgQ8TJ6yD29nFyenSWjBkeg8E8ukTGvFudQl8nrR8VbIoq2qWrXcIBO3-ILXpk1ty22ms07gPWm4zWUnclF3WuXP2Ha_6M1zBqVAsojknKuCahShoYy2OVrjneVaGNG-YDIuWhPYn2d1DUq6icGI141fbmqfWjRp1eBy7__zN1-yhyN2D9j28nZlXrGtu271OuDhB-lKgmQ
link.rule.ids 315,782,786,27933,27934
linkProvider Elsevier
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Approach+to+the+comprehensive+analysis+of+glycoproteins+isolated+from+human+serum+using+a+multi-lectin+affinity+column&rft.jtitle=Journal+of+Chromatography+A&rft.au=Yang%2C+Ziping&rft.au=Hancock%2C+William+S.&rft.date=2004-10-22&rft.pub=Elsevier+B.V&rft.issn=0021-9673&rft.volume=1053&rft.issue=1&rft.spage=79&rft.epage=88&rft_id=info:doi/10.1016%2Fj.chroma.2004.08.150&rft.externalDocID=S0021967304014335
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0021-9673&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0021-9673&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0021-9673&client=summon