Three new modes of adenine-copper(II) coordination: interligand interactions controlling the selective N3-, N7- and bridging μ-N3,N7-metal-bonding of adenine to different N-substituted iminodiacetato-copper(II) chelates

• Published in: Inorganica Chimica Acta Vol. 339; pp. 160 - 170
• Main Authors: Bugella-Altamirano, E, Choquesillo-Lazarte, D, González-Pérez, J.M, Sánchez-Moreno, M.J, Marı́n-Sánchez, R, Martı́n-Ramos, J.D, Covelo, B, Carballo, R, Castiñeiras, A, Niclós-Gutiérrez, J
• Format: Journal Article
• Language: English
• Published: Elsevier B.V 15-11-2002
• Subjects: Adenine; Copper(II); Crystal structures; Molecular recognition; N-substituted iminodiacetate; π,π-Stacking; Adenine; Molecular recognition; Crystal structures; π,π-Stacking; N-substituted iminodiacetate; Copper(II)
• ISSN: 0020-1693; 1873-3255
• DOI: 10.1016/S0020-1693(02)00920-9

The reaction of Cu2CO3(OH)2, various N-substituted-iminodiacetic acids [R-N(CH2CO2H)2)] and adenine (AdeH) in water yields crystalline samples of mixed-ligand copper(II) complexes of formulas [Cu(A)(N7-AdeH)(H2O)]·H2O (A=N-methyl- or N-ethyl-iminodiacetato(2−); compounds 1 and 2, respectively), [Cu(B)(N3-AdeH)(H2O)]·H2O (B=N-benzyl- or N-(p-methylbenzyl)-iminodiacetato(2−); compounds 3 and 4, respectively) as well as [Cu4(pheida)4(μ-N3,N7-AdeH)2(H2O)4]·2H2O (pheida=N-phenethyl-iminodiacetato(2−)). Crystal structures of the acid H2pheida and compounds 1–5 are reported. H2pheida acid exhibits a typical zwitterionic structure. Copper(II) compounds were also studied by TG analysis (with FT-IR study of the evolved gasses), IR, electronic and ESR spectra and magnetic susceptibility data. The N-alkyl- or N-benzyl-like-iminodiacetato(2−) ligands (A or B) give complexes with Cu(II)/(A or B)/AdeH equimolar ratio, whereas pheida yields an unexpected tetranuclear compound with a 2:2:1 Cu(II)/pheida/AdeH molar ratio. In 1 and 2 AdeH binds to the metal by N7, whereas in 3 and 4 the N3 atom is used. An unexpected bridging μ-N3,N7-AdeH-dicopper(II) binding mode is found in the tetra-nuclear compound 5 (without interligand π,π-stacking interactions). These AdeH-Cu(II) binding modes have not been referred in the literature before. The difference in AdeH-Cu(II) binding modes in compounds 1 or 2 and 3 or 4 is rationalised on the basis of the absence or presence of a flexible N-benzyl-like substituent in the iminodiacetato(2−) ligand skeleton, which prevents or permits the interligand π,π-stacking interactions.
The structural study of five mixed-ligand Cu(II) complexes which have N-substituted iminodiacetato(2−) (N-R-IDA; R alkyl, benzyl-like or phenethyl) and adenine (AdeH) as ligands shows three new and selective AdeH-Cu(II) binding modes, N3-, N7- and μ-N3,N7-, respectively, which can be, in part, explained by π,π-stacking and/or hydrogen bond interligand interactions.