The Organization of Repetitive DNA in the Genomes of Amazonian Lizard Species in the Family Teiidae

Repetitive DNA is the largest fraction of the eukaryote genome and comprises tandem and dispersed sequences. It presents variations in relation to its composition, number of copies, distribution, dynamics, and genome organization, and participates in the evolutionary diversification of different ver...

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Published in:Cytogenetic and genome research Vol. 147; no. 2-3; p. 161
Main Authors: Carvalho, Natalia D M, Pinheiro, Vanessa S S, Carmo, Edson J, Goll, Leonardo G, Schneider, Carlos H, Gross, Maria C
Format: Journal Article
Language:English
Published: Switzerland 01-01-2015
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Abstract Repetitive DNA is the largest fraction of the eukaryote genome and comprises tandem and dispersed sequences. It presents variations in relation to its composition, number of copies, distribution, dynamics, and genome organization, and participates in the evolutionary diversification of different vertebrate species. Repetitive sequences are usually located in the heterochromatin of centromeric and telomeric regions of chromosomes, contributing to chromosomal structures. Therefore, the aim of this study was to physically map repetitive DNA sequences (5S rDNA, telomeric sequences, tropomyosin gene 1, and retroelements Rex1 and SINE) of mitotic chromosomes of Amazonian species of teiids (Ameiva ameiva, Cnemidophorus sp. 1, Kentropyx calcarata, Kentropyx pelviceps, and Tupinambis teguixin) to understand their genome organization and karyotype evolution. The mapping of repetitive sequences revealed a distinct pattern in Cnemidophorus sp. 1, whereas the other species showed all sequences interspersed in the heterochromatic region. Physical mapping of the tropomyosin 1 gene was performed for the first time in lizards and showed that in addition to being functional, this gene has a structural function similar to the mapped repetitive elements as it is located preferentially in centromeric regions and termini of chromosomes.
AbstractList Repetitive DNA is the largest fraction of the eukaryote genome and comprises tandem and dispersed sequences. It presents variations in relation to its composition, number of copies, distribution, dynamics, and genome organization, and participates in the evolutionary diversification of different vertebrate species. Repetitive sequences are usually located in the heterochromatin of centromeric and telomeric regions of chromosomes, contributing to chromosomal structures. Therefore, the aim of this study was to physically map repetitive DNA sequences (5S rDNA, telomeric sequences, tropomyosin gene 1, and retroelements Rex1 and SINE) of mitotic chromosomes of Amazonian species of teiids (Ameiva ameiva, Cnemidophorus sp. 1, Kentropyx calcarata, Kentropyx pelviceps, and Tupinambis teguixin) to understand their genome organization and karyotype evolution. The mapping of repetitive sequences revealed a distinct pattern in Cnemidophorus sp. 1, whereas the other species showed all sequences interspersed in the heterochromatic region. Physical mapping of the tropomyosin 1 gene was performed for the first time in lizards and showed that in addition to being functional, this gene has a structural function similar to the mapped repetitive elements as it is located preferentially in centromeric regions and termini of chromosomes.
Author Goll, Leonardo G
Gross, Maria C
Carmo, Edson J
Carvalho, Natalia D M
Schneider, Carlos H
Pinheiro, Vanessa S S
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  givenname: Vanessa S S
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  givenname: Maria C
  surname: Gross
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crossref_primary_10_1089_zeb_2016_1283
crossref_primary_10_1007_s00412_017_0651_8
crossref_primary_10_1089_zeb_2015_1237
crossref_primary_10_3897_CompCytogen_v10i2_7081
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Snippet Repetitive DNA is the largest fraction of the eukaryote genome and comprises tandem and dispersed sequences. It presents variations in relation to its...
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SubjectTerms Animals
Brazil
Chromosome Mapping - methods
Evolution, Molecular
Genome - genetics
Geography
Heterochromatin - genetics
In Situ Hybridization, Fluorescence
Lizards - classification
Lizards - genetics
Repetitive Sequences, Nucleic Acid - genetics
Retroelements - genetics
RNA, Ribosomal, 5S - genetics
Species Specificity
Tropomyosin - genetics
Title The Organization of Repetitive DNA in the Genomes of Amazonian Lizard Species in the Family Teiidae
URI https://www.ncbi.nlm.nih.gov/pubmed/26867142
Volume 147
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