lcQTH: Rapid quantitative trait mapping by tracing parental haplotypes with ultra-low-coverage sequencing
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| Published in: | Plant communications Vol. 5; no. 10; p. 101008 |
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| Main Authors: | , , , , , , , , , , |
| Format: | Journal Article |
| Language: | English |
| Published: |
China
Elsevier Inc
14-10-2024
Elsevier |
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| ArticleNumber | 101008 |
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| Author | Wang, Zihao Liu, Jie Peng, Huiru Liu, Jilu Ni, Zhongfu Yang, Zhengzhao Su, Zhenqi Chen, Zhe Wang, Wenxi Sun, Qixin Guo, Weilong |
| Author_xml | – sequence: 1 givenname: Wenxi surname: Wang fullname: Wang, Wenxi – sequence: 2 givenname: Zhe surname: Chen fullname: Chen, Zhe – sequence: 3 givenname: Zhengzhao surname: Yang fullname: Yang, Zhengzhao – sequence: 4 givenname: Zihao surname: Wang fullname: Wang, Zihao – sequence: 5 givenname: Jilu surname: Liu fullname: Liu, Jilu – sequence: 6 givenname: Jie surname: Liu fullname: Liu, Jie – sequence: 7 givenname: Huiru surname: Peng fullname: Peng, Huiru – sequence: 8 givenname: Zhenqi surname: Su fullname: Su, Zhenqi – sequence: 9 givenname: Zhongfu surname: Ni fullname: Ni, Zhongfu – sequence: 10 givenname: Qixin surname: Sun fullname: Sun, Qixin – sequence: 11 givenname: Weilong orcidid: 0000-0001-5199-1359 surname: Guo fullname: Guo, Weilong email: guoweilong@cau.edu.cn |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/38918949$$D View this record in MEDLINE/PubMed |
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| Cites_doi | 10.1146/annurev-arplant-080720-090632 10.1111/pbi.13361 10.1038/s41586-020-2961-x 10.1016/j.tplants.2019.01.003 10.1093/plphys/kiac029 10.1038/22307 10.1038/s41586-023-06023-6 10.1186/s13059-021-02354-7 |
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| References | Walkowiak, Gao, Monat, Haberer, Kassa, Brinton, Ramirez-Gonzalez, Kolodziej, Delorean, Thambugala (bib7) 2020; 588 Peng, Richards, Hartley, Murphy, Devos, Flintham, Beales, Fish, Worland, Pelica (bib3) 1999; 400 Scott, Fradgley, Bentley, Brabbs, Corke, Gardner, Horsnell, Howell, Ladejobi, Mackay (bib4) 2021; 22 Liang, Liu, Yan, Tian (bib1) 2021; 72 Lye, Purugganan (bib2) 2019; 24 Song, Liu, Cao, Liu, Zhang, Chen, Dong, Liu, Zhang, Wang (bib5) 2023; 617 Sun, Dong, Zhao, Ren, Zhang, Chen (bib6) 2020; 18 Yang, Wang, Wang, Xie, Chai, Wang, Feng, Li, Peng, Su (bib8) 2022; 188 Peng (10.1016/j.xplc.2024.101008_bib3) 1999; 400 Lye (10.1016/j.xplc.2024.101008_bib2) 2019; 24 Song (10.1016/j.xplc.2024.101008_bib5) 2023; 617 Yang (10.1016/j.xplc.2024.101008_bib8) 2022; 188 Scott (10.1016/j.xplc.2024.101008_bib4) 2021; 22 Liang (10.1016/j.xplc.2024.101008_bib1) 2021; 72 Walkowiak (10.1016/j.xplc.2024.101008_bib7) 2020; 588 Sun (10.1016/j.xplc.2024.101008_bib6) 2020; 18 |
| References_xml | – volume: 588 start-page: 277 year: 2020 end-page: 283 ident: bib7 article-title: Multiple wheat genomes reveal global variation in modern breeding publication-title: Nature contributor: fullname: Thambugala – volume: 22 start-page: 137 year: 2021 ident: bib4 article-title: Limited haplotype diversity underlies polygenic trait architecture across 70 years of wheat breeding publication-title: Genome Biol. contributor: fullname: Mackay – volume: 400 start-page: 256 year: 1999 end-page: 261 ident: bib3 article-title: Green revolution’ genes encode mutant gibberellin response modulators publication-title: Nature contributor: fullname: Pelica – volume: 188 start-page: 1950 year: 2022 end-page: 1965 ident: bib8 article-title: ggComp enables dissection of germplasm resources and construction of a multiscale germplasm network in wheat publication-title: Plant Physiol. contributor: fullname: Su – volume: 24 start-page: 352 year: 2019 end-page: 365 ident: bib2 article-title: Copy Number Variation in Domestication publication-title: Trends Plant Sci. contributor: fullname: Purugganan – volume: 617 start-page: 118 year: 2023 end-page: 124 ident: bib5 article-title: Reducing brassinosteroid signalling enhances grain yield in semi-dwarf wheat publication-title: Nature contributor: fullname: Wang – volume: 18 start-page: 1354 year: 2020 end-page: 1360 ident: bib6 article-title: The Wheat 660K SNP array demonstrates great potential for marker-assisted selection in polyploid wheat publication-title: Plant Biotechnol. J. contributor: fullname: Chen – volume: 72 start-page: 357 year: 2021 end-page: 385 ident: bib1 article-title: Natural Variation in Crops: Realized Understanding, Continuing Promise publication-title: Annu. Rev. Plant Biol. contributor: fullname: Tian – volume: 72 start-page: 357 year: 2021 ident: 10.1016/j.xplc.2024.101008_bib1 article-title: Natural Variation in Crops: Realized Understanding, Continuing Promise publication-title: Annu. Rev. Plant Biol. doi: 10.1146/annurev-arplant-080720-090632 contributor: fullname: Liang – volume: 18 start-page: 1354 year: 2020 ident: 10.1016/j.xplc.2024.101008_bib6 article-title: The Wheat 660K SNP array demonstrates great potential for marker-assisted selection in polyploid wheat publication-title: Plant Biotechnol. J. doi: 10.1111/pbi.13361 contributor: fullname: Sun – volume: 588 start-page: 277 year: 2020 ident: 10.1016/j.xplc.2024.101008_bib7 article-title: Multiple wheat genomes reveal global variation in modern breeding publication-title: Nature doi: 10.1038/s41586-020-2961-x contributor: fullname: Walkowiak – volume: 24 start-page: 352 year: 2019 ident: 10.1016/j.xplc.2024.101008_bib2 article-title: Copy Number Variation in Domestication publication-title: Trends Plant Sci. doi: 10.1016/j.tplants.2019.01.003 contributor: fullname: Lye – volume: 188 start-page: 1950 year: 2022 ident: 10.1016/j.xplc.2024.101008_bib8 article-title: ggComp enables dissection of germplasm resources and construction of a multiscale germplasm network in wheat publication-title: Plant Physiol. doi: 10.1093/plphys/kiac029 contributor: fullname: Yang – volume: 400 start-page: 256 year: 1999 ident: 10.1016/j.xplc.2024.101008_bib3 article-title: Green revolution’ genes encode mutant gibberellin response modulators publication-title: Nature doi: 10.1038/22307 contributor: fullname: Peng – volume: 617 start-page: 118 year: 2023 ident: 10.1016/j.xplc.2024.101008_bib5 article-title: Reducing brassinosteroid signalling enhances grain yield in semi-dwarf wheat publication-title: Nature doi: 10.1038/s41586-023-06023-6 contributor: fullname: Song – volume: 22 start-page: 137 year: 2021 ident: 10.1016/j.xplc.2024.101008_bib4 article-title: Limited haplotype diversity underlies polygenic trait architecture across 70 years of wheat breeding publication-title: Genome Biol. doi: 10.1186/s13059-021-02354-7 contributor: fullname: Scott |
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| Title | lcQTH: Rapid quantitative trait mapping by tracing parental haplotypes with ultra-low-coverage sequencing |
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