Gene expression profile of the plant pathogen Xylella fastidiosa during biofilm formation in vitro
Abstract A biofilm is a community of microorganisms attached to a solid surface. Cells within biofilms differ from planktonic cells, showing higher resistance to biocides, detergent, antibiotic treatments and host defense responses. Even though there are a number of gene expression studies in bacter...
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| Published in: | FEMS microbiology letters Vol. 237; no. 2; pp. 341 - 353 |
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| Main Authors: | , , , , , , , , |
| Format: | Journal Article |
| Language: | English |
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Oxford, UK
Blackwell Publishing Ltd
01-08-2004
Oxford University Press |
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| Abstract | Abstract
A biofilm is a community of microorganisms attached to a solid surface. Cells within biofilms differ from planktonic cells, showing higher resistance to biocides, detergent, antibiotic treatments and host defense responses. Even though there are a number of gene expression studies in bacterial biofilm formation, limited information is available concerning plant pathogen. It was previously demonstrated that the plant pathogen Xylella fastidiosa could grow as a biofilm, a possibly important factor for its pathogenicity. In this study we utilized analysis of microarrays to specifically identify genes expressed in X. fastidiosa cells growing in a biofilm, when compared to planktonic cells. About half of the differentially expressed genes encode hypothetical proteins, reflecting the large number of ORFs with unknown functions in bacterial genomes. However, under the biofilm condition we observed an increase in the expression of some housekeeping genes responsible for metabolic functions. We also found a large number of genes from the pXF51 plasmid being differentially expressed. Some of the overexpressed genes in the biofilm condition encode proteins involved in attachment to surfaces. Other genes possibly confer advantages to the bacterium in the environment that it colonizes. This study demonstrates that the gene expression in the biofilm growth condition of the plant pathogen X. fastidiosa is quite similar to other characterized systems. |
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| AbstractList | A biofilm is a community of microorganisms attached to a solid surface. Cells within biofilms differ from planktonic cells, showing higher resistance to biocides, detergent, antibiotic treatments and host defense responses. Even though there are a number of gene expression studies in bacterial biofilm formation, limited information is available concerning plant pathogen. It was previously demonstrated that the plant pathogen Xylella fastidiosa could grow as a biofilm, a possibly important factor for its pathogenicity. In this study we utilized analysis of microarrays to specifically identify genes expressed in X. fastidiosa cells growing in a biofilm, when compared to planktonic cells. About half of the differentially expressed genes encode hypothetical proteins, reflecting the large number of ORFs with unknown functions in bacterial genomes. However, under the biofilm condition we observed an increase in the expression of some housekeeping genes responsible for metabolic functions. We also found a large number of genes from the pXF51 plasmid being differentially expressed. Some of the overexpressed genes in the biofilm condition encode proteins involved in attachment to surfaces. Other genes possibly confer advantages to the bacterium in the environment that it colonizes. This study demonstrates that the gene expression in the biofilm growth condition of the plant pathogen X. fastidiosa is quite similar to other characterized systems. Abstract A biofilm is a community of microorganisms attached to a solid surface. Cells within biofilms differ from planktonic cells, showing higher resistance to biocides, detergent, antibiotic treatments and host defense responses. Even though there are a number of gene expression studies in bacterial biofilm formation, limited information is available concerning plant pathogen. It was previously demonstrated that the plant pathogen Xylella fastidiosa could grow as a biofilm, a possibly important factor for its pathogenicity. In this study we utilized analysis of microarrays to specifically identify genes expressed in X. fastidiosa cells growing in a biofilm, when compared to planktonic cells. About half of the differentially expressed genes encode hypothetical proteins, reflecting the large number of ORFs with unknown functions in bacterial genomes. However, under the biofilm condition we observed an increase in the expression of some housekeeping genes responsible for metabolic functions. We also found a large number of genes from the pXF51 plasmid being differentially expressed. Some of the overexpressed genes in the biofilm condition encode proteins involved in attachment to surfaces. Other genes possibly confer advantages to the bacterium in the environment that it colonizes. This study demonstrates that the gene expression in the biofilm growth condition of the plant pathogen X. fastidiosa is quite similar to other characterized systems. |
| Author | Muto, Nair H. Yanai, Giane M. de Oliveira, Regina C. Nunes, Luiz R. Takita, Marco A. Coletta-Filho, Helvécio D. Machado, Marcos A. de Souza, Alessandra A. Caldana, Camila |
| Author_xml | – sequence: 1 givenname: Alessandra A. surname: de Souza fullname: de Souza, Alessandra A. organization: Embrapa Recursos Genéticos e Biotecnologia, 70770-900 Brasília-DF, Brazil – sequence: 2 givenname: Marco A. surname: Takita fullname: Takita, Marco A. organization: Centro APTA Citros ‘Sylvio Moreira’/Instituto Agronômico – CP 04, CEP 13490-970, Cordeirópolis, SP – Brazil – sequence: 3 givenname: Helvécio D. surname: Coletta-Filho fullname: Coletta-Filho, Helvécio D. organization: Centro APTA Citros ‘Sylvio Moreira’/Instituto Agronômico – CP 04, CEP 13490-970, Cordeirópolis, SP – Brazil – sequence: 4 givenname: Camila surname: Caldana fullname: Caldana, Camila organization: Núcleo Integrado de Biotecnologia – Universidade de Mogi das Cruzes, 08780-911, Mogi das Cruzes, SP – Brazil – sequence: 5 givenname: Giane M. surname: Yanai fullname: Yanai, Giane M. organization: Núcleo Integrado de Biotecnologia – Universidade de Mogi das Cruzes, 08780-911, Mogi das Cruzes, SP – Brazil – sequence: 6 givenname: Nair H. surname: Muto fullname: Muto, Nair H. organization: Núcleo Integrado de Biotecnologia – Universidade de Mogi das Cruzes, 08780-911, Mogi das Cruzes, SP – Brazil – sequence: 7 givenname: Regina C. surname: de Oliveira fullname: de Oliveira, Regina C. organization: Núcleo Integrado de Biotecnologia – Universidade de Mogi das Cruzes, 08780-911, Mogi das Cruzes, SP – Brazil – sequence: 8 givenname: Luiz R. surname: Nunes fullname: Nunes, Luiz R. organization: Núcleo Integrado de Biotecnologia – Universidade de Mogi das Cruzes, 08780-911, Mogi das Cruzes, SP – Brazil – sequence: 9 givenname: Marcos A. surname: Machado fullname: Machado, Marcos A. email: marcos@centrodecitricultura.br organization: Centro APTA Citros ‘Sylvio Moreira’/Instituto Agronômico – CP 04, CEP 13490-970, Cordeirópolis, SP – Brazil |
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| Copyright | 2004 Federation of European Microbiological Societies 2004 2004 Federation of European Microbiological Societies |
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A biofilm is a community of microorganisms attached to a solid surface. Cells within biofilms differ from planktonic cells, showing higher resistance... A biofilm is a community of microorganisms attached to a solid surface. Cells within biofilms differ from planktonic cells, showing higher resistance to... |
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| SubjectTerms | Antibiotics Biocides Biofilms DNA microarrays Gene expression Genes Genomes Growth conditions Mature biofilm Microarray Microbiology Microorganisms Pathogenicity Pathogens Planktonic cells Proteins Solid surfaces Xylella fastidiosa |
| Title | Gene expression profile of the plant pathogen Xylella fastidiosa during biofilm formation in vitro |
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