Comparative proteomic analysis of somatic embryo maturation in Carica papaya L
Somatic embryogenesis is a complex process regulated by numerous factors. The identification of proteins that are differentially expressed during plant development could result in the development of molecular markers of plant metabolism and provide information contributing to the monitoring and unde...
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| Published in: | Proteome science Vol. 12; no. 1; p. 37 |
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| Main Authors: | , , , , , , , |
| Format: | Journal Article |
| Language: | English |
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BioMed Central Ltd
26-06-2014
BioMed Central |
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| Abstract | Somatic embryogenesis is a complex process regulated by numerous factors. The identification of proteins that are differentially expressed during plant development could result in the development of molecular markers of plant metabolism and provide information contributing to the monitoring and understanding of different biological responses. In addition, the identification of molecular markers could lead to the optimization of protocols allowing the use of biotechnology for papaya propagation and reproduction. This work aimed to investigate the effects of polyethylene glycol (PEG) on somatic embryo development and the protein expression profile during somatic embryo maturation in papaya (Carica papaya L.).
The maturation treatment supplemented with 6% PEG (PEG6) resulted in the greatest number of somatic embryos and induced differential protein expression compared with cultures grown under the control treatment. Among 135 spots selected for MS/MS analysis, 76 spots were successfully identified, 38 of which were common to both treatments, while 14 spots were unique to the control treatment, and 24 spots were unique to the PEG6 treatment. The identified proteins were assigned to seven categories or were unclassified. The most representative class of proteins observed in the control treatment was associated with the stress response (25.8%), while those under PEG6 treatment were carbohydrate and energy metabolism (18.4%) and the stress response (18.4%).
The differential expression of three proteins (enolase, esterase and ADH3) induced by PEG6 treatment could play an important role in maturation, and these proteins could be characterized as candidate biomarkers of somatic embryogenesis in papaya. |
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| AbstractList | BACKGROUND: Somatic embryogenesis is a complex process regulated by numerous factors. The identification of proteins that are differentially expressed during plant development could result in the development of molecular markers of plant metabolism and provide information contributing to the monitoring and understanding of different biological responses. In addition, the identification of molecular markers could lead to the optimization of protocols allowing the use of biotechnology for papaya propagation and reproduction. This work aimed to investigate the effects of polyethylene glycol (PEG) on somatic embryo development and the protein expression profile during somatic embryo maturation in papaya (Carica papaya L.). RESULTS: The maturation treatment supplemented with 6% PEG (PEG6) resulted in the greatest number of somatic embryos and induced differential protein expression compared with cultures grown under the control treatment. Among 135 spots selected for MS/MS analysis, 76 spots were successfully identified, 38 of which were common to both treatments, while 14 spots were unique to the control treatment, and 24 spots were unique to the PEG6 treatment. The identified proteins were assigned to seven categories or were unclassified. The most representative class of proteins observed in the control treatment was associated with the stress response (25.8%), while those under PEG6 treatment were carbohydrate and energy metabolism (18.4%) and the stress response (18.4%). CONCLUSIONS: The differential expression of three proteins (enolase, esterase and ADH3) induced by PEG6 treatment could play an important role in maturation, and these proteins could be characterized as candidate biomarkers of somatic embryogenesis in papaya. Somatic embryogenesis is a complex process regulated by numerous factors. The identification of proteins that are differentially expressed during plant development could result in the development of molecular markers of plant metabolism and provide information contributing to the monitoring and understanding of different biological responses. In addition, the identification of molecular markers could lead to the optimization of protocols allowing the use of biotechnology for papaya propagation and reproduction. This work aimed to investigate the effects of polyethylene glycol (PEG) on somatic embryo development and the protein expression profile during somatic embryo maturation in papaya (Carica papaya L.). The maturation treatment supplemented with 6% PEG (PEG6) resulted in the greatest number of somatic embryos and induced differential protein expression compared with cultures grown under the control treatment. Among 135 spots selected for MS/MS analysis, 76 spots were successfully identified, 38 of which were common to both treatments, while 14 spots were unique to the control treatment, and 24 spots were unique to the PEG6 treatment. The identified proteins were assigned to seven categories or were unclassified. The most representative class of proteins observed in the control treatment was associated with the stress response (25.8%), while those under PEG6 treatment were carbohydrate and energy metabolism (18.4%) and the stress response (18.4%). The differential expression of three proteins (enolase, esterase and ADH3) induced by PEG6 treatment could play an important role in maturation, and these proteins could be characterized as candidate biomarkers of somatic embryogenesis in papaya. Doc number: 37 Abstract Background: Somatic embryogenesis is a complex process regulated by numerous factors. The identification of proteins that are differentially expressed during plant development could result in the development of molecular markers of plant metabolism and provide information contributing to the monitoring and understanding of different biological responses. In addition, the identification of molecular markers could lead to the optimization of protocols allowing the use of biotechnology for papaya propagation and reproduction. This work aimed to investigate the effects of polyethylene glycol (PEG) on somatic embryo development and the protein expression profile during somatic embryo maturation in papaya (Carica papaya L.). Results: The maturation treatment supplemented with 6% PEG (PEG6) resulted in the greatest number of somatic embryos and induced differential protein expression compared with cultures grown under the control treatment. Among 135 spots selected for MS/MS analysis, 76 spots were successfully identified, 38 of which were common to both treatments, while 14 spots were unique to the control treatment, and 24 spots were unique to the PEG6 treatment. The identified proteins were assigned to seven categories or were unclassified. The most representative class of proteins observed in the control treatment was associated with the stress response (25.8%), while those under PEG6 treatment were carbohydrate and energy metabolism (18.4%) and the stress response (18.4%). Conclusions: The differential expression of three proteins (enolase, esterase and ADH3) induced by PEG6 treatment could play an important role in maturation, and these proteins could be characterized as candidate biomarkers of somatic embryogenesis in papaya. Background Somatic embryogenesis is a complex process regulated by numerous factors. The identification of proteins that are differentially expressed during plant development could result in the development of molecular markers of plant metabolism and provide information contributing to the monitoring and understanding of different biological responses. In addition, the identification of molecular markers could lead to the optimization of protocols allowing the use of biotechnology for papaya propagation and reproduction. This work aimed to investigate the effects of polyethylene glycol (PEG) on somatic embryo development and the protein expression profile during somatic embryo maturation in papaya (Carica papaya L.). Results The maturation treatment supplemented with 6% PEG (PEG6) resulted in the greatest number of somatic embryos and induced differential protein expression compared with cultures grown under the control treatment. Among 135 spots selected for MS/MS analysis, 76 spots were successfully identified, 38 of which were common to both treatments, while 14 spots were unique to the control treatment, and 24 spots were unique to the PEG6 treatment. The identified proteins were assigned to seven categories or were unclassified. The most representative class of proteins observed in the control treatment was associated with the stress response (25.8%), while those under PEG6 treatment were carbohydrate and energy metabolism (18.4%) and the stress response (18.4%). Conclusions The differential expression of three proteins (enolase, esterase and ADH3) induced by PEG6 treatment could play an important role in maturation, and these proteins could be characterized as candidate biomarkers of somatic embryogenesis in papaya. Keywords: Papaya, Somatic embryogenesis, Protein profile, Mass spectrometry, Two-dimensional electrophoresis BACKGROUNDSomatic embryogenesis is a complex process regulated by numerous factors. The identification of proteins that are differentially expressed during plant development could result in the development of molecular markers of plant metabolism and provide information contributing to the monitoring and understanding of different biological responses. In addition, the identification of molecular markers could lead to the optimization of protocols allowing the use of biotechnology for papaya propagation and reproduction. This work aimed to investigate the effects of polyethylene glycol (PEG) on somatic embryo development and the protein expression profile during somatic embryo maturation in papaya (Carica papaya L.). RESULTSThe maturation treatment supplemented with 6% PEG (PEG6) resulted in the greatest number of somatic embryos and induced differential protein expression compared with cultures grown under the control treatment. Among 135 spots selected for MS/MS analysis, 76 spots were successfully identified, 38 of which were common to both treatments, while 14 spots were unique to the control treatment, and 24 spots were unique to the PEG6 treatment. The identified proteins were assigned to seven categories or were unclassified. The most representative class of proteins observed in the control treatment was associated with the stress response (25.8%), while those under PEG6 treatment were carbohydrate and energy metabolism (18.4%) and the stress response (18.4%). CONCLUSIONSThe differential expression of three proteins (enolase, esterase and ADH3) induced by PEG6 treatment could play an important role in maturation, and these proteins could be characterized as candidate biomarkers of somatic embryogenesis in papaya. Somatic embryogenesis is a complex process regulated by numerous factors. The identification of proteins that are differentially expressed during plant development could result in the development of molecular markers of plant metabolism and provide information contributing to the monitoring and understanding of different biological responses. In addition, the identification of molecular markers could lead to the optimization of protocols allowing the use of biotechnology for papaya propagation and reproduction. This work aimed to investigate the effects of polyethylene glycol (PEG) on somatic embryo development and the protein expression profile during somatic embryo maturation in papaya (Carica papaya L.). The maturation treatment supplemented with 6% PEG (PEG6) resulted in the greatest number of somatic embryos and induced differential protein expression compared with cultures grown under the control treatment. Among 135 spots selected for MS/MS analysis, 76 spots were successfully identified, 38 of which were common to both treatments, while 14 spots were unique to the control treatment, and 24 spots were unique to the PEG6 treatment. The identified proteins were assigned to seven categories or were unclassified. The most representative class of proteins observed in the control treatment was associated with the stress response (25.8%), while those under PEG6 treatment were carbohydrate and energy metabolism (18.4%) and the stress response (18.4%). The differential expression of three proteins (enolase, esterase and ADH3) induced by PEG6 treatment could play an important role in maturation, and these proteins could be characterized as candidate biomarkers of somatic embryogenesis in papaya. |
| ArticleNumber | 37 |
| Audience | Academic |
| Author | da Costa, Monique Nunes Barroso, Tatiana Vale, Ellen de Moura Santa-Catarina, Claudete Ferreira, André Teixeira da Silva Silveira, Vanildo Heringer, Angelo Schuabb Perales, Jonas Enrique Aguilar |
| AuthorAffiliation | 2 Laboratório de Toxinologia da Fundação Oswaldo Cruz, Instituto Oswaldo Cruz. Instituto Oswaldo Cruz /IOC /FIOCRUZ, Av. Brasil, 4365. Manguinhos, CEP: 21040-360 Rio de Janeiro, RJ, Brazil 1 Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil 3 Laboratório de Biologia Celular e Tecidual, CBB-UENF, Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil |
| AuthorAffiliation_xml | – name: 2 Laboratório de Toxinologia da Fundação Oswaldo Cruz, Instituto Oswaldo Cruz. Instituto Oswaldo Cruz /IOC /FIOCRUZ, Av. Brasil, 4365. Manguinhos, CEP: 21040-360 Rio de Janeiro, RJ, Brazil – name: 1 Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil – name: 3 Laboratório de Biologia Celular e Tecidual, CBB-UENF, Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil |
| Author_xml | – sequence: 1 givenname: Ellen de Moura surname: Vale fullname: Vale, Ellen de Moura organization: Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil – sequence: 2 givenname: Angelo Schuabb surname: Heringer fullname: Heringer, Angelo Schuabb organization: Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil – sequence: 3 givenname: Tatiana surname: Barroso fullname: Barroso, Tatiana organization: Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil – sequence: 4 givenname: André Teixeira da Silva surname: Ferreira fullname: Ferreira, André Teixeira da Silva organization: Laboratório de Toxinologia da Fundação Oswaldo Cruz, Instituto Oswaldo Cruz. Instituto Oswaldo Cruz /IOC /FIOCRUZ, Av. Brasil, 4365. Manguinhos, CEP: 21040-360 Rio de Janeiro, RJ, Brazil – sequence: 5 givenname: Monique Nunes surname: da Costa fullname: da Costa, Monique Nunes organization: Laboratório de Toxinologia da Fundação Oswaldo Cruz, Instituto Oswaldo Cruz. Instituto Oswaldo Cruz /IOC /FIOCRUZ, Av. Brasil, 4365. Manguinhos, CEP: 21040-360 Rio de Janeiro, RJ, Brazil – sequence: 6 givenname: Jonas Enrique Aguilar surname: Perales fullname: Perales, Jonas Enrique Aguilar organization: Laboratório de Toxinologia da Fundação Oswaldo Cruz, Instituto Oswaldo Cruz. Instituto Oswaldo Cruz /IOC /FIOCRUZ, Av. Brasil, 4365. Manguinhos, CEP: 21040-360 Rio de Janeiro, RJ, Brazil – sequence: 7 givenname: Claudete surname: Santa-Catarina fullname: Santa-Catarina, Claudete organization: Laboratório de Biologia Celular e Tecidual, CBB-UENF, Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil – sequence: 8 givenname: Vanildo surname: Silveira fullname: Silveira, Vanildo organization: Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, RJ 28013-602, Brazil |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/25076862$$D View this record in MEDLINE/PubMed |
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| Copyright | COPYRIGHT 2014 BioMed Central Ltd. 2014 Vale et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. Copyright © 2014 Vale et al.; licensee BioMed Central Ltd. 2014 Vale et al.; licensee BioMed Central Ltd. |
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| Keywords | Two-dimensional electrophoresis Papaya Protein profile Mass spectrometry Somatic embryogenesis |
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| PublicationDate | 2014-06-26 |
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| SubjectTerms | Analysis Embryonic development Embryos Fruits Genetic aspects Mass spectrometry Peptides Physiological aspects Polyethylene glycol Proteins Studies |
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| Title | Comparative proteomic analysis of somatic embryo maturation in Carica papaya L |
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