A Comparison of Neuroelectrophysiology Databases
As data sharing has become more prevalent, three pillars - archives, standards, and analysis tools - have emerged as critical components in facilitating effective data sharing and collaboration. This paper compares four freely available intracranial neuroelectrophysiology data repositories: Data Arc...
Saved in:
Main Authors: | , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Format: | Journal Article |
Language: | English |
Published: |
26-06-2023
|
Subjects: | |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Abstract | As data sharing has become more prevalent, three pillars - archives,
standards, and analysis tools - have emerged as critical components in
facilitating effective data sharing and collaboration. This paper compares four
freely available intracranial neuroelectrophysiology data repositories: Data
Archive for the BRAIN Initiative (DABI), Distributed Archives for
Neurophysiology Data Integration (DANDI), OpenNeuro, and Brain-CODE. The aim of
this review is to describe archives that provide researchers with tools to
store, share, and reanalyze both human and non-human neurophysiology data based
on criteria that are of interest to the neuroscientific community. The Brain
Imaging Data Structure (BIDS) and Neurodata Without Borders (NWB) are utilized
by these archives to make data more accessible to researchers by implementing a
common standard. As the necessity for integrating large-scale analysis into
data repository platforms continues to grow within the neuroscientific
community, this article will highlight the various analytical and customizable
tools developed within the chosen archives that may advance the field of
neuroinformatics. |
---|---|
AbstractList | As data sharing has become more prevalent, three pillars - archives,
standards, and analysis tools - have emerged as critical components in
facilitating effective data sharing and collaboration. This paper compares four
freely available intracranial neuroelectrophysiology data repositories: Data
Archive for the BRAIN Initiative (DABI), Distributed Archives for
Neurophysiology Data Integration (DANDI), OpenNeuro, and Brain-CODE. The aim of
this review is to describe archives that provide researchers with tools to
store, share, and reanalyze both human and non-human neurophysiology data based
on criteria that are of interest to the neuroscientific community. The Brain
Imaging Data Structure (BIDS) and Neurodata Without Borders (NWB) are utilized
by these archives to make data more accessible to researchers by implementing a
common standard. As the necessity for integrating large-scale analysis into
data repository platforms continues to grow within the neuroscientific
community, this article will highlight the various analytical and customizable
tools developed within the chosen archives that may advance the field of
neuroinformatics. |
Author | Cohen, Samantha L Behan, Brendan Gray, Alex Dichter, Benjamin Duncan, Dominique Boswell, Misque Poldrack, Russell A Garner, Rachael Hermes, Dora Pouratian, Nader Beauchamp, Michael S Sparks, Alana Ghosh, Satrajit Wang, Zhengjia Salehi, Sana Hobel, Samuel Fisher, Calvary Halchenko, Yaroslav Arnott, Stephen R Markiewicz, Chris Magnotti, John Subash, Priyanka Toga, Arthur W Makeig, Scott Delorme, Arnaud |
Author_xml | – sequence: 1 givenname: Priyanka surname: Subash fullname: Subash, Priyanka – sequence: 2 givenname: Alex surname: Gray fullname: Gray, Alex – sequence: 3 givenname: Misque surname: Boswell fullname: Boswell, Misque – sequence: 4 givenname: Samantha L surname: Cohen fullname: Cohen, Samantha L – sequence: 5 givenname: Rachael surname: Garner fullname: Garner, Rachael – sequence: 6 givenname: Sana surname: Salehi fullname: Salehi, Sana – sequence: 7 givenname: Calvary surname: Fisher fullname: Fisher, Calvary – sequence: 8 givenname: Samuel surname: Hobel fullname: Hobel, Samuel – sequence: 9 givenname: Satrajit surname: Ghosh fullname: Ghosh, Satrajit – sequence: 10 givenname: Yaroslav surname: Halchenko fullname: Halchenko, Yaroslav – sequence: 11 givenname: Benjamin surname: Dichter fullname: Dichter, Benjamin – sequence: 12 givenname: Russell A surname: Poldrack fullname: Poldrack, Russell A – sequence: 13 givenname: Chris surname: Markiewicz fullname: Markiewicz, Chris – sequence: 14 givenname: Dora surname: Hermes fullname: Hermes, Dora – sequence: 15 givenname: Arnaud surname: Delorme fullname: Delorme, Arnaud – sequence: 16 givenname: Scott surname: Makeig fullname: Makeig, Scott – sequence: 17 givenname: Brendan surname: Behan fullname: Behan, Brendan – sequence: 18 givenname: Alana surname: Sparks fullname: Sparks, Alana – sequence: 19 givenname: Stephen R surname: Arnott fullname: Arnott, Stephen R – sequence: 20 givenname: Zhengjia surname: Wang fullname: Wang, Zhengjia – sequence: 21 givenname: John surname: Magnotti fullname: Magnotti, John – sequence: 22 givenname: Michael S surname: Beauchamp fullname: Beauchamp, Michael S – sequence: 23 givenname: Nader surname: Pouratian fullname: Pouratian, Nader – sequence: 24 givenname: Arthur W surname: Toga fullname: Toga, Arthur W – sequence: 25 givenname: Dominique surname: Duncan fullname: Duncan, Dominique |
BackLink | https://doi.org/10.48550/arXiv.2306.15041$$DView paper in arXiv |
BookMark | eNotzr1uwjAYhWEP7QC0F8DU3ECCHdtxMqJAoRJqF_bos_25RApxZFNE7r78Teedjp4peel9j4TMGc1EKSVdQLi05yzntMiYpIJNCF0mtT8OENro-8S75Bv_gscOzSn44TDG1nf-d0xWcAINEeMbeXXQRXx_7ozsP9f7epvufjZf9XKXQqFYikbpCs21c-qU4qZglvJcOAklrVCBrXJAaQEqJ5nSpXAgCskts6CNZnxGPh63d3IzhPYIYWxu9OZO5_8UtEDS |
ContentType | Journal Article |
Copyright | http://creativecommons.org/licenses/by/4.0 |
Copyright_xml | – notice: http://creativecommons.org/licenses/by/4.0 |
DBID | AKY ALC GOX |
DOI | 10.48550/arxiv.2306.15041 |
DatabaseName | arXiv Computer Science arXiv Quantitative Biology arXiv.org |
DatabaseTitleList | |
Database_xml | – sequence: 1 dbid: GOX name: arXiv.org url: http://arxiv.org/find sourceTypes: Open Access Repository |
DeliveryMethod | fulltext_linktorsrc |
ExternalDocumentID | 2306_15041 |
GroupedDBID | AKY ALC GOX |
ID | FETCH-LOGICAL-a671-ec7b9eca6720f773c61d0324f5a809e7ad92ae5daa9f517b84fa4653d1dabcb13 |
IEDL.DBID | GOX |
IngestDate | Mon Jan 08 05:49:17 EST 2024 |
IsDoiOpenAccess | true |
IsOpenAccess | true |
IsPeerReviewed | false |
IsScholarly | false |
Language | English |
LinkModel | DirectLink |
MergedId | FETCHMERGED-LOGICAL-a671-ec7b9eca6720f773c61d0324f5a809e7ad92ae5daa9f517b84fa4653d1dabcb13 |
OpenAccessLink | https://arxiv.org/abs/2306.15041 |
ParticipantIDs | arxiv_primary_2306_15041 |
PublicationCentury | 2000 |
PublicationDate | 2023-06-26 |
PublicationDateYYYYMMDD | 2023-06-26 |
PublicationDate_xml | – month: 06 year: 2023 text: 2023-06-26 day: 26 |
PublicationDecade | 2020 |
PublicationYear | 2023 |
Score | 1.8877192 |
SecondaryResourceType | preprint |
Snippet | As data sharing has become more prevalent, three pillars - archives,
standards, and analysis tools - have emerged as critical components in
facilitating... |
SourceID | arxiv |
SourceType | Open Access Repository |
SubjectTerms | Computer Science - Databases Quantitative Biology - Quantitative Methods |
Title | A Comparison of Neuroelectrophysiology Databases |
URI | https://arxiv.org/abs/2306.15041 |
hasFullText | 1 |
inHoldings | 1 |
isFullTextHit | |
isPrint | |
link | http://sdu.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwdV25TgMxEB2RVDQIBChAQC5oDbZ310cZ5SAVFKRIF40viQZQNkF8PrZ3ORo6azzN2Jbe89jzBuA2sMqx4CuqQjrBde0M1TrUNKFt9FY6gToXCi-f1eNaz-ZZJod818Lg9vPlo9MHtu195sd3ibLkyvSBEPnL1sPTunucLFJcvf-vX-KYxfQHJBbHcNSzOzLptuMEDsLrKbAJmf50-yNvkRRBjL7_TMkslNQ2meEOM6i0Z7BazFfTJe0bFVCUitPglDXBpbFgUanKSe5ZIiqxQc1MUOiNwNB4RBMbrqyuI2ZZM889Wmd5dQ7DdNcPIyAJ0BOPTHZZ8do1mMDcVtYaKUJaTM8vYFTC27x3WhSbHPmmRH75_9QVHOYu6fmHk5BjGO62-3ANg9bvb8qCfgGaMXR9 |
link.rule.ids | 228,230,782,887 |
linkProvider | Cornell University |
openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=A+Comparison+of+Neuroelectrophysiology+Databases&rft.au=Subash%2C+Priyanka&rft.au=Gray%2C+Alex&rft.au=Boswell%2C+Misque&rft.au=Cohen%2C+Samantha+L&rft.date=2023-06-26&rft_id=info:doi/10.48550%2Farxiv.2306.15041&rft.externalDocID=2306_15041 |