Application of a luminescence-based biosensor for assessing naphthalene biodegradation in soils from a manufactured gas plant
Despite numerous reviews suggesting that microbial biosensors could be used in many environmental applications, in reality they have failed to be used for which they were designed. In part this is because most of these sensors perform in an aqueous phase and a buffered medium, which is in contrast t...
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| Published in: | Environmental pollution (1987) Vol. 157; no. 5; pp. 1643 - 1648 |
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| Main Authors: | , , |
| Format: | Journal Article |
| Language: | English |
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| Abstract | Despite numerous reviews suggesting that microbial biosensors could be used in many environmental applications, in reality they have failed to be used for which they were designed. In part this is because most of these sensors perform in an aqueous phase and a buffered medium, which is in contrast to the nature of genuine environmental systems. In this study, a range of non-exhaustive extraction techniques (NEETs) were assessed for (i) compatibility with a naphthalene responsive biosensor and (ii) correlation with naphthalene biodegradation. The NEETs removed a portion of the total soil naphthalene in the order of methanol > HPCD > βCD > water. To place the biosensor performance to NEETs in context, a biodegradation experiment was carried out using historically contaminated soils. By coupling the HPCD extraction with the biosensor, it was possible to assess the fraction of the naphthalene capable of undergoing microbial degradation in soil.
Exposure of microbial biosensors to cyclodextrin solutions allows the assessment of the degradable fraction of contaminants in soil. |
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| AbstractList | Despite numerous reviews suggesting that microbial biosensors could be used in many environmental applications, in reality they have failed to be used for which they were designed. In part this is because most of these sensors perform in an aqueous phase and a buffered medium, which is in contrast to the nature of genuine environmental systems. In this study, a range of non-exhaustive extraction techniques (NEETs) were assessed for (i) compatibility with a naphthalene responsive biosensor and (ii) correlation with naphthalene biodegradation. The NEETs removed a portion of the total soil naphthalene in the order of methanol > HPCD > bCD > water. To place the biosensor performance to NEETs in context, a biodegradation experiment was carried out using historically contaminated soils. By coupling the HPCD extraction with the biosensor, it was possible to assess the fraction of the naphthalene capable of undergoing microbial degradation in soil. Despite numerous reviews suggesting that microbial biosensors could be used in many environmental applications, in reality they have failed to be used for which they were designed. In part this is because most of these sensors perform in an aqueous phase and a buffered medium, which is in contrast to the nature of genuine environmental systems. In this study, a range of non-exhaustive extraction techniques (NEETs) were assessed for (i) compatibility with a naphthalene responsive biosensor and (ii) correlation with naphthalene biodegradation. The NEETs removed a portion of the total soil naphthalene in the order of methanol > HPCD > βCD > water. To place the biosensor performance to NEETs in context, a biodegradation experiment was carried out using historically contaminated soils. By coupling the HPCD extraction with the biosensor, it was possible to assess the fraction of the naphthalene capable of undergoing microbial degradation in soil. Exposure of microbial biosensors to cyclodextrin solutions allows the assessment of the degradable fraction of contaminants in soil. Despite numerous reviews suggesting that microbial biosensors could be used in many environmental applications, in reality they have failed to be used for which they were designed. In part this is because most of these sensors perform in an aqueous phase and a buffered medium, which is in contrast to the nature of genuine environmental systems. In this study, a range of non-exhaustive extraction techniques (NEETs) were assessed for (i) compatibility with a naphthalene responsive biosensor and (ii) correlation with naphthalene biodegradation. The NEETs removed a portion of the total soil naphthalene in the order of methanol > HPCD > betaCD > water. To place the biosensor performance to NEETs in context, a biodegradation experiment was carried out using historically contaminated soils. By coupling the HPCD extraction with the biosensor, it was possible to assess the fraction of the naphthalene capable of undergoing microbial degradation in soil. |
| Author | Paton, G.I. Reid, B.J. Semple, K.T. |
| Author_xml | – sequence: 1 givenname: G.I. surname: Paton fullname: Paton, G.I. organization: Institute of Biological and Environmental Sciences, Cruickshank Building, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom – sequence: 2 givenname: B.J. surname: Reid fullname: Reid, B.J. organization: School of Environmental Sciences, University of East Anglia, Norwich NR4 7TJ, United Kingdom – sequence: 3 givenname: K.T. surname: Semple fullname: Semple, K.T. email: k.semple@lancaster.ac.uk organization: Lancaster Environment Centre, Lancaster University, Bailrigg, Lancaster, Lancashire LA1 4YQ, United Kingdom |
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| Keywords | Biodegradation Extraction Bioavailability Organic contaminants Bioluminescent bacteria Microbial activity Bioluminescence Hydrocarbon Pollutant behavior Gas industry Polycyclic aromatic compound Mutagen Soil pollution Persistent organic pollutant Carcinogen Naphthalene Decontamination Industrial wasteland Biosensor Measurement method Organic compounds |
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| References | van der Meer, Tropel, Jaspers (bib32) 2004; 6 Burlage, Palumbo, Heitzer, Sayler (bib7) 1993; 45-6 Doick, Clasper, Urmann, Semple (bib12) 2006; 144 Kohlmeier, Mancuso, Tecon, Harms, van der Meer, Wells (bib21) 2007; 22 Kelsey, Kottler, Alexander (bib20) 1997; 31 Semple, Dew, Doick, Rhodes (bib28) 2006; 140 Trang, Berg, Viet, Van Mui, Van Der Meer (bib40) 2005; 39 Tecon, Wells, van der Meer (bib31) 2006; 8 Cuypers, Clemens, Grotenhuis, Rulkens (bib9) 2001; 10 Semple, Morriss, Paton (bib27) 2003; 54 Barriuso, Koskinen, Sadowsky (bib8) 2004; 52 Miller, Alexander (bib36) 1991; 25 Allan, Semple, Arya, Reid (bib1) 2006; 44 Doick, Dew, Semple (bib11) 2005; 39 Hickman, Reid (bib15) 2005; 138 Bosma, Middeldorp, Schraa, Zehnder (bib2) 1997; 31 Bundy, Campbell, Paton (bib5) 2001; 3 Reid, Northcott, Jones, Semple (bib25) 1998; 32 Dardenne, Smolders, De Coen, Blust (bib38) 2007; 41 Patterson, Semple, Paton (bib24) 2004; 241 Stokes, Paton, Semple (bib39) 2005; 21 Brusseau, Wang, Wang (bib3) 1997; 31 Heitzer, Webb, Thonnard, Sayler (bib14) 1992; 58 Ho, Quinn (bib16) 1993; 12 Reid, Stokes, Jones, Semple (bib26) 2000; 34 Allan, Semple, Arya, Reid (bib35) 2007; 41 Werlen, Jaspers, van der Meer (bib34) 2004; 70 Kelsey, Alexander (bib19) 1997; 16 Huang, Wang, Zheng, Huang, Singer, Thompson, Whiteley (bib17) 2005; 7 Bundy, Maciel, Cronin, Paton (bib6) 2003; 70 Paton, Weitz, Killham, Semple (bib37) 2005; 21 Bundy, Durham, Morriss, Campbell, Paton (bib4) 2001; 42 Harms, Wells, van der Meer (bib41) 2006; 70 Shaw, Beaton, Glover, Killham, Osborn, Meharg (bib29) 2000; 34 Paton (10.1016/j.envpol.2008.12.020_bib37) 2005; 21 Barriuso (10.1016/j.envpol.2008.12.020_bib8) 2004; 52 van der Meer (10.1016/j.envpol.2008.12.020_bib32) 2004; 6 Patterson (10.1016/j.envpol.2008.12.020_bib24) 2004; 241 Burlage (10.1016/j.envpol.2008.12.020_bib7) 1993; 45-6 Hickman (10.1016/j.envpol.2008.12.020_bib15) 2005; 138 Kelsey (10.1016/j.envpol.2008.12.020_bib19) 1997; 16 Trang (10.1016/j.envpol.2008.12.020_bib40) 2005; 39 Werlen (10.1016/j.envpol.2008.12.020_bib34) 2004; 70 Allan (10.1016/j.envpol.2008.12.020_bib35) 2007; 41 Cuypers (10.1016/j.envpol.2008.12.020_bib9) 2001; 10 Semple (10.1016/j.envpol.2008.12.020_bib27) 2003; 54 Heitzer (10.1016/j.envpol.2008.12.020_bib14) 1992; 58 Reid (10.1016/j.envpol.2008.12.020_bib25) 1998; 32 Ho (10.1016/j.envpol.2008.12.020_bib16) 1993; 12 Tecon (10.1016/j.envpol.2008.12.020_bib31) 2006; 8 Shaw (10.1016/j.envpol.2008.12.020_bib29) 2000; 34 Kohlmeier (10.1016/j.envpol.2008.12.020_bib21) 2007; 22 Doick (10.1016/j.envpol.2008.12.020_bib11) 2005; 39 Kelsey (10.1016/j.envpol.2008.12.020_bib20) 1997; 31 Bosma (10.1016/j.envpol.2008.12.020_bib2) 1997; 31 Brusseau (10.1016/j.envpol.2008.12.020_bib3) 1997; 31 Dardenne (10.1016/j.envpol.2008.12.020_bib38) 2007; 41 Reid (10.1016/j.envpol.2008.12.020_bib26) 2000; 34 Stokes (10.1016/j.envpol.2008.12.020_bib39) 2005; 21 Huang (10.1016/j.envpol.2008.12.020_bib17) 2005; 7 Bundy (10.1016/j.envpol.2008.12.020_bib5) 2001; 3 Allan (10.1016/j.envpol.2008.12.020_bib1) 2006; 44 Doick (10.1016/j.envpol.2008.12.020_bib12) 2006; 144 Bundy (10.1016/j.envpol.2008.12.020_bib6) 2003; 70 Miller (10.1016/j.envpol.2008.12.020_bib36) 1991; 25 Semple (10.1016/j.envpol.2008.12.020_bib28) 2006; 140 Bundy (10.1016/j.envpol.2008.12.020_bib4) 2001; 42 Harms (10.1016/j.envpol.2008.12.020_bib41) 2006; 70 |
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| SubjectTerms | Analysis methods Applied sciences Bioavailability Biodegradation Biodegradation, Environmental Bioluminescent bacteria Earth sciences Earth, ocean, space Engineering and environment geology. Geothermics Environmental Monitoring - methods Exact sciences and technology Extraction Industrial Waste Naphthalenes - analysis Naphthalenes - metabolism Organic contaminants Pollution Pollution, environment geology Pseudomonas fluorescens - metabolism Soil - analysis Soil and sediments pollution Soil Microbiology Soil Pollutants - analysis Soil Pollutants - metabolism |
| Title | Application of a luminescence-based biosensor for assessing naphthalene biodegradation in soils from a manufactured gas plant |
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