Search Results - "van den Berg, Bastiaan A"

Exploring sequence characteristics related to high-level production of secreted proteins in Aspergillus niger by van den Berg, Bastiaan A, Reinders, Marcel J T, Hulsman, Marc, Wu, Liang, Pel, Herman J, Roubos, Johannes A, de Ridder, Dick

“…Protein sequence features are explored in relation to the production of over-expressed extracellular proteins by fungi. Knowledge on features influencing…”
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Insight into neutral and disease-associated human genetic variants through interpretable predictors by van den Berg, Bastiaan A, Reinders, Marcel J T, de Ridder, Dick, de Beer, Tjaart A P

“…A variety of methods that predict human nonsynonymous single nucleotide polymorphisms (SNPs) to be neutral or disease-associated have been developed over the…”
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SPiCE: a web-based tool for sequence-based protein classification and exploration by van den Berg, Bastiaan A, Reinders, Marcel J T, Roubos, Johannes A, de Ridder, Dick

“…Amino acid sequences and features extracted from such sequences have been used to predict many protein properties, such as subcellular localization or…”
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Protein redesign by learning from data by van den Berg, Bastiaan A., Reinders, Marcel J.T., van der Laan, Jan-Metske, Roubos, Johannes A., de Ridder, Dick

“…Protein redesign methods aim to improve a desired property by carefully selecting mutations in relevant regions guided by protein structure. However, often…”
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Toward tunable RNA thermo-switches for temperature dependent gene expression by Stassen, Oscar M. J. A, Jorna, Ruud J. J, Berg, Bastiaan A. van den, Haghi, Rad, Ehtemam, Farzad, Flipse, Steven M, de Groot, Marco J. L, Kiers, Janine A, Nikerel, I. Emrah, Bellomo, Domenico

“…RNA thermometers are mRNA strands with a temperature dependent secondary structure: depending on the spatial conformation, the mRNA strand can get translated…”
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