Search Results - "van Westen, G J P"

QSAR-derived affinity fingerprints (part 1): fingerprint construction and modeling performance for similarity searching, bioactivity classification and scaffold hopping by Škuta, C., Cortés-Ciriano, I., Dehaen, W., Kříž, P., van Westen, G. J. P., Tetko, I. V., Bender, A., Svozil, D.

“…An affinity fingerprint is the vector consisting of compound’s affinity or potency against the reference panel of protein targets. Here, we present the QAFFP…”
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GenUI: interactive and extensible open source software platform for de novo molecular generation and cheminformatics by Sicho, M., Liu, X., Svozil, D., van Westen, G. J. P.

“…Many contemporary cheminformatics methods, including computer-aided de novo drug design, hold promise to significantly accelerate and reduce the cost of drug…”
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Pan-cancer functional analysis of somatic mutations in G protein-coupled receptors by Bongers, B. J., Gorostiola González, M., Wang, X., van Vlijmen, H. W. T., Jespers, W., Gutiérrez-de-Terán, H., Ye, K., IJzerman, A. P., Heitman, L. H., van Westen, G. J. P.

“…G Protein-coupled receptors (GPCRs) are the most frequently exploited drug target family, moreover they are often found mutated in cancer. Here we used a…”
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Papyrus: a large-scale curated dataset aimed at bioactivity predictions by Béquignon, O. J. M., Bongers, B. J., Jespers, W., IJzerman, A. P., van der Water, B., van Westen, G. J. P.

“…With the ongoing rapid growth of publicly available ligand–protein bioactivity data, there is a trove of valuable data that can be used to train a plethora of…”
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Optogenetic activation of intracellular adenosine A2A receptor signaling in the hippocampus is sufficient to trigger CREB phosphorylation and impair memory by Li, P, Rial, D, Canas, P M, Yoo, J-H, Li, W, Zhou, X, Wang, Y, van Westen, G J P, Payen, M-P, Augusto, E, Gonçalves, N, Tomé, A R, Li, Z, Wu, Z, Hou, X, Zhou, Y, PIJzerman, Ad, Boyden, E S, Cunha, R A, Qu, J, Chen, J-F

“…Human and animal studies have converged to suggest that caffeine consumption prevents memory deficits in aging and Alzheimer’s disease through the antagonism…”
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Body mass index related electrocardiographic findings in healthy young individuals with a normal body mass index by Hassing, G. J., van der Wall, H. E. C., van Westen, G. J. P., Kemme, M. J. B., Adiyaman, A., Elvan, A., Burggraaf, J., Gal, P.

“…Introduction An increased body mass index (BMI) (>25 kg/m 2 ) is associated with a wide range of electrocardiographic changes. However, the association between…”
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Using machine learning techniques to characterize sleep-deprived driving behavior by van der Wall, H. E. C., Doll, R. J., van Westen, G. J. P., Koopmans, I., Zuiker, R. G., Burggraaf, J., Cohen, A. F.

“…Sleep deprivation is known to affect driving behavior and may lead to serious car accidents similar to the effects from e.g., alcohol. In a previous study, we…”
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Importance of the extracellular loops in G protein-coupled receptors for ligand recognition and receptor activation by Peeters, M.C, van Westen, G.J.P, Li, Q, IJzerman, A.P

“…G protein-coupled receptors (GPCRs) are the major drug target of medicines on the market today. Therefore, much research is and has been devoted to the…”
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Random Forest ensembles for detection and prediction of Alzheimer's disease with a good between-cohort robustness by Lebedev, A V, Westman, E, Van Westen, G J P, Kramberger, M G, Lundervold, A, Aarsland, D, Soininen, H, Kłoszewska, I, Mecocci, P, Tsolaki, M, Vellas, B, Lovestone, S, Simmons, A

“…Computer-aided diagnosis of Alzheimer's disease (AD) is a rapidly developing field of neuroimaging with strong potential to be used in practice. In this…”
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Impact of cancer-associated mutations in CC chemokine receptor 2 on receptor function and antagonism by den Hollander, L.S., Béquignon, O.J.M., Wang, X., van Wezel, K., Broekhuis, J., Gorostiola González, M., de Visser, K.E., IJzerman, A.P., van Westen, G.J.P., Heitman, L.H.

“…[Display omitted] CC chemokine receptor 2 (CCR2), a G protein-coupled receptor, plays a role in many cancer-related processes such as metastasis formation and…”
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The use of machine learning improves the assessment of drug-induced driving behaviour by van der Wall, H.E.C., Doll, R.J., van Westen, G.J.P., Koopmans, I., Zuiker, R.G., Burggraaf, J., Cohen, A.F.

“…•Machine learning using multiple driving features improves the assessment of drug-induced abnormal driving behaviour.•Alcohol and alprazolam influenced driving…”
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Number of ECG Replicates and QT Correction Formula Influences the Estimated QT Prolonging Effect of a Drug by van der Wall, Hein Evert Christiaan, Gal, Pim, Kemme, Michiel J B, van Westen, G.J.P, Burggraaf, J

“…INTRODUCTION:The present analysis addressed the effect of the number of ECG replicates extracted from a continuous ECG on estimated QT interval prolongation…”
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Erratum: Optogenetic activation of intracellular adenosine A2A receptor signaling in the hippocampus is sufficient to trigger CREB phosphorylation and impair memory by Li, P, Rial, D, Canas, P M, Yoo, J-H, Li, W, Zhou, X, Wang, Y, van Westen, G J P, Payen, M-P, Augusto, E, Gonçalves, N, Tomé, A R, Li, Z, Wu, Z, Hou, X, Zhou, Y, PIJzerman, Ad, Boyden, E S, Cunha, R A, Qu, J, Chen, J-F

“…Correction to: Molecular Psychiatry advance online publication, 17 February 2015; doi:10.1038/mp.2014.182 Following publication of the above article, the…”
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Optogenetic activation of intracellular adenosine [A.sub.2A] receptor signaling in the hippocampus is sufficient to trigger CREB phosphorylation and impair memory by Li, P, Rial, D, Canas, P.M, Yoo, J.-H, Li, W, Zhou, X, Wang, Y, van Westen, G.J.P, Payen, M.-P, Augusto, E, Goncalves, N, Tome, A.R, Li, Z, Wu, Z, Hou, X, Zhou, Y, PIJzerman, Ad, Boyden, E.S, Cunha, R.A, Qu, J, Chen, J.-F

“…Human and animal studies have converged to suggest that caffeine consumption prevents memory deficits in aging and Alzheimer's disease through the antagonism…”
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Corrigendum to “Impact of cancer-associated mutations in CC chemokine receptor 2 on receptor function and antagonism” [Biochem. Pharmacol. 208 (2023) 115399] by den Hollander, L.S., Béquignon, O.J.M., Wang, X., van Wezel, K., Broekhuis, J., Gorostiola González, M., de Visser, K.E., IJzerman, A.P., van Westen, G.J.P., Heitman, L.H.

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Optogenetic activation of intracellular adenosine [A.sub.2A] receptor signaling in the hippocampus is sufficient to trigger CREB phosphorylation and impair memory

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QSAR-derived affinity fingerprints by Skuta, C, Cortés-Ciriano, I, Dehaen, W, KÅíz, P, van Westen, G. J. P, Tetko, I. V, Bender, A, Svozil, D

“…An affinity fingerprint is the vector consisting of compound's affinity or potency against the reference panel of protein targets. Here, we present the QAFFP…”
Get full text

Optogenetic activation of intracellular adenosine A2A receptor signaling in the hippocampus is sufficient to trigger CREB phosphorylation and impair memory by Li, P, Rial, D, Canas, P M, Yoo, J-H, Li, W, Zhou, X, Wang, Y, van Westen, G J P, Payen, M-P, Augusto, E, Gonçalves, N, Tomé, A R, Li, Z, Wu, Z, Hou, X, Zhou, Y, PIJzerman, Ad, Boyden, E S, Cunha, R A, Qu, J, Chen, J-F

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Optogenetic activation of intracellular adenosine A sub(2A) receptor signaling in the hippocampus is sufficient to trigger CREB phosphorylation and impair memory by Li, P, Rial, D, Canas, P M, Yoo, J-H, Li, W, Zhou, X, Wang, Y, van Westen, G J P, Payen, M-P, Augusto, E, Goncalves, N, Tome, A R, Li, Z, Wu, Z, Hou, X, Zhou, Y, PIJzerman, Ad, Boyden, E S, Cunha, R A, Qu, J, Chen, J-F

“…Human and animal studies have converged to suggest that caffeine consumption prevents memory deficits in aging and Alzheimer's disease through the antagonism…”
Get full text

Reciprocal causation models of cognitive vs volumetric cerebral intermediate phenotypes for schizophrenia in a pan-European twin cohort by Toulopoulou, T, van Haren, N, Zhang, X, Sham, P C, Cherny, S S, Campbell, D D, Picchioni, M, Murray, R, Boomsma, D I, Hulshoff Pol, Hilleke E, Brouwer, R, Schnack, H, Fañanás, L, Sauer, H, Nenadic, I, Weisbrod, M, Cannon, T D, Kahn, R S

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