Search Results - "van Duin, A. C. T."
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Reactive Molecular Dynamics Simulation on the Disintegration of Kapton, POSS Polyimide, Amorphous Silica, and Teflon during Atomic Oxygen Impact Using the Reaxff Reactive Force-Field Method
Published in The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory (17-04-2014)“…Atomic oxygen (AO) is the most abundant element in the low Earth orbit (LEO). It is the result of the dissociation of molecular oxygen by ultraviolet radiation…”
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Reactive Molecular Dynamics Study on the First Steps of DNA Damage by Free Hydroxyl Radicals
Published in The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory (13-10-2011)“…We employ a large scale molecular simulation based on bond-order ReaxFF to simulate the chemical reaction and study the damage to a large fragment of DNA…”
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Atomic-scale simulations of reactive oxygen plasma species interacting with bacterial cell walls
Published in New journal of physics (26-09-2012)“…In recent years there has been growing interest in the use of low-temperature atmospheric pressure plasmas for biomedical applications. Currently, however,…”
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Plasma Species Interacting with Nickel Surfaces: Toward an Atomic Scale Understanding of Plasma-Catalysis
Published in Journal of physical chemistry. C (04-10-2012)“…The adsorption probability and reaction behavior of CH x plasma species on various nickel catalyst surfaces is investigated by means of reactive molecular…”
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Self-Limiting Oxidation in Small-Diameter Si Nanowires
Published in Chemistry of materials (12-06-2012)“…Recently, core shell silicon nanowires (Si-NWs) have been envisaged to be used for field-effect transistors and photovoltaic applications. In spite of the…”
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Defect healing and enhanced nucleation of carbon nanotubes by low-energy ion bombardment
Published in Physical review letters (05-02-2013)“…Structural defects inevitably appear during the nucleation event that determines the structure and properties of single-walled carbon nanotubes. By combining…”
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Atomic-scale insight into the interactions between hydroxyl radicals and DNA in solution using the ReaxFF reactive force field
Published in New journal of physics (02-10-2015)“…Cold atmospheric pressure plasmas have proven to provide an alternative treatment of cancer by targeting tumorous cells while leaving their healthy…”
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Structure and dynamics of shock-induced nanobubble collapse in water
Published in Physical review letters (01-07-2010)“…Shock-induced collapse of nanobubbles in water is investigated with molecular dynamics simulations based on a reactive force field. We observe a focused jet at…”
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Hyperthermal Oxidation of Si(100)2×1 Surfaces: Effect of Growth Temperature
Published in Journal of physical chemistry. C (19-04-2012)“…Using reactive molecular dynamics simulations based on the ReaxFF potential, we studied the growth mechanism of ultrathin silica (SiO2) layers during…”
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New Mechanism for Oxidation of Native Silicon Oxide
Published in Journal of physical chemistry. C (16-05-2013)“…Continued miniaturization of metal-oxide-semiconductor field-effect transistors (MOSFETs) requires an ever-decreasing thickness of the gate oxide. The…”
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Reactive Molecular Dynamics Study of the pH-Dependent Dynamic Structure of α‑Helix
Published in The journal of physical chemistry. B (26-11-2014)“…We have studied the α-helix to random coil transition using ReaxFF reactive molecular dynamics as a function of pH. Urea binding to peptides and associated…”
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Water Interactions with Nanoporous Silica: Comparison of ReaxFF and ab Initio based Molecular Dynamics Simulations
Published in Journal of physical chemistry. C (03-11-2016)“…Detailed understanding of the reactions and processes which govern silicate–water interactions is critical to geological, materials, and environmental…”
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Computational Insights into Tunable Reversible Network Materials: Accelerated ReaxFF Kinetics of Furan-Maleimide Diels–Alder Reactions for Self-Healing and Recyclability
Published in The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory (20-11-2024)“…In this study, ReaxFF molecular dynamics simulations were benchmarked and used to study the relative kinetics of the retro Diels-Alder reaction between furan…”
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Molecular Dynamics Investigation of the Effects of Tip–Substrate Interactions during Nanoindentation
Published in Journal of physical chemistry. C (18-06-2015)“…Nanoindentation in molecular dynamics (MD) simulations typically uses highly idealized indenter tip models. Such tips usually consist of either a single sphere…”
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Reactive Molecular Dynamics of the Initial Oxidation Stages of Ni(111) in Pure Water: Effect of an Applied Electric Field
Published in The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory (06-12-2012)“…Corrosion processes occurring in aqueous solutions are critically dependent upon the interaction between the metal electrode and the solvent. In this work, the…”
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Interactions of plasma species on nickel catalysts: A reactive molecular dynamics study on the influence of temperature and surface structure
Published in Applied catalysis. B, Environmental (01-07-2014)“…•Influence of temperature and surface structure on the reactivity was studied.•Substantial H2 formation is obtained at 1400K and above.•Limited influence of…”
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On the c-Sila-SiO2 Interface in Hyperthermal Si Oxidation at Room Temperature
Published in Journal of physical chemistry. C (18-10-2012)Get full text
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Hyperthermal Oxidation of Si(100)2x1 Surfaces: Effect of Growth Temperature
Published in Journal of physical chemistry. C (19-04-2012)Get full text
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Temperature influence on the reactivity of plasma species on a nickel catalyst surface: An atomic scale study
Published in Catalysis today (01-08-2013)“…•Reactivity on Ni(111) was studied as a function of temperature.•Substantial H2 formation is obtained at 1400K and 1600K.•H2 molecules are the most frequently…”
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Hyperthermal Oxygen Interacting with Silicon Surfaces: Adsorption, Implantation, and Damage Creation
Published in Journal of physical chemistry. C (24-03-2011)“…Using reactive molecular dynamics simulations, we have investigated the effect of single-impact, low-energy (thermal-100 eV) bombardment of a Si(100){2 × 1}…”
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