Search Results - "van Duin, A. C. T."

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    Reactive Molecular Dynamics Study on the First Steps of DNA Damage by Free Hydroxyl Radicals by Abolfath, Ramin M, van Duin, A. C. T, Brabec, Thomas

    “…We employ a large scale molecular simulation based on bond-order ReaxFF to simulate the chemical reaction and study the damage to a large fragment of DNA…”
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    Journal Article
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    Atomic-scale simulations of reactive oxygen plasma species interacting with bacterial cell walls by Yusupov, M, Neyts, E C, Khalilov, U, Snoeckx, R, van Duin, A C T, Bogaerts, A

    Published in New journal of physics (26-09-2012)
    “…In recent years there has been growing interest in the use of low-temperature atmospheric pressure plasmas for biomedical applications. Currently, however,…”
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    Journal Article
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    Plasma Species Interacting with Nickel Surfaces: Toward an Atomic Scale Understanding of Plasma-Catalysis by Somers, W, Bogaerts, A, van Duin, A. C. T, Neyts, E. C

    Published in Journal of physical chemistry. C (04-10-2012)
    “…The adsorption probability and reaction behavior of CH x plasma species on various nickel catalyst surfaces is investigated by means of reactive molecular…”
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    Journal Article
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    Self-Limiting Oxidation in Small-Diameter Si Nanowires by Khalilov, U, Pourtois, G, Duin, A. C. T. van, Neyts, E. C

    Published in Chemistry of materials (12-06-2012)
    “…Recently, core shell silicon nanowires (Si-NWs) have been envisaged to be used for field-effect transistors and photovoltaic applications. In spite of the…”
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    Journal Article
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    Defect healing and enhanced nucleation of carbon nanotubes by low-energy ion bombardment by Neyts, E C, Ostrikov, K, Han, Z J, Kumar, S, van Duin, A C T, Bogaerts, A

    Published in Physical review letters (05-02-2013)
    “…Structural defects inevitably appear during the nucleation event that determines the structure and properties of single-walled carbon nanotubes. By combining…”
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    Journal Article
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    Atomic-scale insight into the interactions between hydroxyl radicals and DNA in solution using the ReaxFF reactive force field by Verlackt, C C W, Neyts, E C, Jacob, T, Fantauzzi, D, Golkaram, M, Shin, Y-K, van Duin, A C T, Bogaerts, A

    Published in New journal of physics (02-10-2015)
    “…Cold atmospheric pressure plasmas have proven to provide an alternative treatment of cancer by targeting tumorous cells while leaving their healthy…”
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    Journal Article
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    Structure and dynamics of shock-induced nanobubble collapse in water by Vedadi, M, Choubey, A, Nomura, K, Kalia, R K, Nakano, A, Vashishta, P, van Duin, A C T

    Published in Physical review letters (01-07-2010)
    “…Shock-induced collapse of nanobubbles in water is investigated with molecular dynamics simulations based on a reactive force field. We observe a focused jet at…”
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    Journal Article
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    Hyperthermal Oxidation of Si(100)2×1 Surfaces: Effect of Growth Temperature by Khalilov, U, Pourtois, G, van Duin, A. C. T, Neyts, E. C

    Published in Journal of physical chemistry. C (19-04-2012)
    “…Using reactive molecular dynamics simulations based on the ReaxFF potential, we studied the growth mechanism of ultrathin silica (SiO2) layers during…”
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    Journal Article
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    New Mechanism for Oxidation of Native Silicon Oxide by Khalilov, U, Pourtois, G, Huygh, S, van Duin, A. C. T, Neyts, E. C, Bogaerts, A

    Published in Journal of physical chemistry. C (16-05-2013)
    “…Continued miniaturization of metal-oxide-semiconductor field-effect transistors (MOSFETs) requires an ever-decreasing thickness of the gate oxide. The…”
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    Journal Article
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    Reactive Molecular Dynamics Study of the pH-Dependent Dynamic Structure of α‑Helix by Golkaram, M, Shin, Y. K, van Duin, A. C. T

    Published in The journal of physical chemistry. B (26-11-2014)
    “…We have studied the α-helix to random coil transition using ReaxFF reactive molecular dynamics as a function of pH. Urea binding to peptides and associated…”
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    Journal Article
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    Water Interactions with Nanoporous Silica: Comparison of ReaxFF and ab Initio based Molecular Dynamics Simulations by Rimsza, J. M, Yeon, Jejoon, van Duin, A. C. T, Du, Jincheng

    Published in Journal of physical chemistry. C (03-11-2016)
    “…Detailed understanding of the reactions and processes which govern silicate–water interactions is critical to geological, materials, and environmental…”
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    Journal Article
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    Molecular Dynamics Investigation of the Effects of Tip–Substrate Interactions during Nanoindentation by Tavazza, F, Senftle, T. P, Zou, C, Becker, C. A, van Duin, A. C. T

    Published in Journal of physical chemistry. C (18-06-2015)
    “…Nanoindentation in molecular dynamics (MD) simulations typically uses highly idealized indenter tip models. Such tips usually consist of either a single sphere…”
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    Journal Article
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    Reactive Molecular Dynamics of the Initial Oxidation Stages of Ni(111) in Pure Water: Effect of an Applied Electric Field by Assowe, O, Politano, O, Vignal, V, Arnoux, P, Diawara, B, Verners, O, van Duin, A. C. T

    “…Corrosion processes occurring in aqueous solutions are critically dependent upon the interaction between the metal electrode and the solvent. In this work, the…”
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    Journal Article
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    Interactions of plasma species on nickel catalysts: A reactive molecular dynamics study on the influence of temperature and surface structure by Somers, W., Bogaerts, A., van Duin, A.C.T., Neyts, E.C.

    Published in Applied catalysis. B, Environmental (01-07-2014)
    “…•Influence of temperature and surface structure on the reactivity was studied.•Substantial H2 formation is obtained at 1400K and above.•Limited influence of…”
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    Journal Article
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    Temperature influence on the reactivity of plasma species on a nickel catalyst surface: An atomic scale study by Somers, W., Bogaerts, A., van Duin, A.C.T., Huygh, S., Bal, K.M., Neyts, E.C.

    Published in Catalysis today (01-08-2013)
    “…•Reactivity on Ni(111) was studied as a function of temperature.•Substantial H2 formation is obtained at 1400K and 1600K.•H2 molecules are the most frequently…”
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    Journal Article Conference Proceeding
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    Hyperthermal Oxygen Interacting with Silicon Surfaces: Adsorption, Implantation, and Damage Creation by Neyts, E. C, Khalilov, U, Pourtois, G, van Duin, A. C. T

    Published in Journal of physical chemistry. C (24-03-2011)
    “…Using reactive molecular dynamics simulations, we have investigated the effect of single-impact, low-energy (thermal-100 eV) bombardment of a Si(100){2 × 1}…”
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    Journal Article