Search Results - "de Boer, Wietse"
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1
Pathogen suppression by microbial volatile organic compounds in soils
Published in FEMS microbiology ecology (01-08-2019)“…ABSTRACT There is increasing evidence that microbial volatile organic compounds (mVOCs) play an important role in interactions between microbes in soils. In…”
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2
Calling from distance: attraction of soil bacteria by plant root volatiles
Published in The ISME Journal (01-05-2018)“…Plants release a wide set of secondary metabolites including volatile organic compounds (VOCs). Many of those compounds are considered to function as defense…”
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3
Legacy of land use history determines reprogramming of plant physiology by soil microbiome
Published in The ISME Journal (01-03-2019)“…Microorganisms associated with roots are thought to be part of the so-called extended plant phenotypes with roles in the acquisition of nutrients, production…”
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4
Fungal volatile compounds induce production of the secondary metabolite Sodorifen in Serratia plymuthica PRI-2C
Published in Scientific reports (13-04-2017)“…The ability of bacteria and fungi to communicate with each other is a remarkable aspect of the microbial world. It is recognized that volatile organic…”
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5
Dinner in the dark: Illuminating drivers of soil organic matter decomposition
Published in Soil biology & biochemistry (01-02-2017)“…Soil organic matter (SOM) dynamics plays a crucial role in soil ecosystem functioning and global warming. SOM is normally degraded slowly, but its…”
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Microbial Small Talk: Volatiles in Fungal-Bacterial Interactions
Published in Frontiers in microbiology (05-01-2016)“…There is increasing evidence that volatile organic compounds (VOCs) play an important role in the interactions between fungi and bacteria, two major groups of…”
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7
Strategies to Maintain Natural Biocontrol of Soil-Borne Crop Diseases During Severe Drought and Rainfall Events
Published in Frontiers in microbiology (02-11-2018)“…In many parts of the world, agricultural ecosystems are increasingly exposed to severe drought, and rainfall events due to climate changes. This coincides with…”
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Effect of the amount of organic trigger compounds, nitrogen and soil microbial biomass on the magnitude of priming of soil organic matter
Published in PloS one (16-05-2019)“…Priming effects (PEs) are defined as short-term changes in the turnover of soil organic matter (SOM) caused by the addition of easily degradable organic…”
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9
Living in a fungal world: impact of fungi on soil bacterial niche development
Published in FEMS microbiology reviews (01-09-2005)“…The colonization of land by plants appears to have coincided with the appearance of mycorrhiza-like fungi. Over evolutionary time, fungi have maintained their…”
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10
Trait Differentiation within the Fungus-Feeding (Mycophagous) Bacterial Genus Collimonas
Published in PloS one (01-06-2016)“…The genus Collimonas consists of facultative, fungus-feeding (mycophagous) bacteria. To date, 3 species (C. fungivorans, C. pratensis and C. arenae) have been…”
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11
Exploring the reservoir of potential fungal plant pathogens in agricultural soil
Published in Applied soil ecology : a section of Agriculture, ecosystems & environment (01-12-2017)“…•An inventory of the pool of plant pathogenic fungi in 42 agricultural soils is made.•The reservoir of plant pathogenic propagules in soil is driven by the…”
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Biological activities associated with the volatile compound 2,5-bis(1-methylethyl)-pyrazine
Published in FEMS microbiology letters (01-02-2019)“…Pyrazines are 1,4- diazabenzene based volatile organic compounds and known for their broad-spectrum antimicrobial activity. In the present study we assessed…”
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13
Transcriptional and antagonistic responses of Pseudomonas fluorescens Pf0-1 to phylogenetically different bacterial competitors
Published in The ISME Journal (01-06-2011)“…The ability of soil bacteria to successfully compete with a range of other microbial species is crucial for their growth and survival in the nutrient-limited…”
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14
Fungal diversity and potential tree pathogens in decaying logs and stumps
Published in Forest ecology and management (15-12-2017)“…•Fungal composition differs between stumps and logs of the same tree species.•Different potential fungal tree pathogens were found in logs and stumps.•Fungal…”
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15
Exploring the genomic traits of fungus-feeding bacterial genus Collimonas
Published in BMC genomics (24-12-2015)“…Collimonas is a genus belonging to the class of Betaproteobacteria and consists mostly of soil bacteria with the ability to exploit living fungi as food source…”
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16
Priorities for research in soil ecology
Published in Pedobiologia (01-07-2017)“…•There still are fundamental aspects that need to be better understood in soil ecology.•Here we highlight major knowledge gaps that should be prioritized in…”
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Controlling the Microbiome: Microhabitat Adjustments for Successful Biocontrol Strategies in Soil and Human Gut
Published in Frontiers in microbiology (13-07-2016)Get full text
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Upscaling of fungal–bacterial interactions: from the lab to the field
Published in Current opinion in microbiology (01-06-2017)“…Highlights • The outcome of fungal–bacterial interactions is context dependent. • No direct extrapolation of pairwise interactions to community interactions. •…”
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Suppression of soil-borne Fusarium pathogens of peanut by intercropping with the medicinal herb Atractylodes lancea
Published in Soil biology & biochemistry (01-01-2018)“…Intercropping has historically been employed as an efficient management strategy to prevent disease outbreaks. Our previous studies indicated that…”
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The sapro-rhizosphere: Carbon flow from saprotrophic fungi into fungus-feeding bacteria
Published in Soil biology & biochemistry (01-11-2016)“…Root-derived, labile organic compounds are thought to enter the rhizosphere food web mainly via consumption by mycorrhizal fungi and bacteria. Studies tracking…”
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