Search Results - "Zulqarnain, Fatima"

Identifying metabolic shifts in Crohn's disease using 'omics-driven contextualized computational metabolic network models by Fernandes, Philip, Sharma, Yash, Zulqarnain, Fatima, McGrew, Brooklyn, Shrivastava, Aman, Ehsan, Lubaina, Payne, Dawson, Dillard, Lillian, Powers, Deborah, Aldridge, Isabelle, Matthews, Jason, Kugathasan, Subra, Fernández, Facundo M., Gaul, David, Papin, Jason A., Syed, Sana

“…Crohn's disease (CD) is a chronic inflammatory disease of the gastrointestinal tract. A clear gap in our existing CD diagnostics and current disease management…”
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Machine-learning-based integrative –‘omics analyses reveal immunologic and metabolic dysregulation in environmental enteric dysfunction by Zulqarnain, Fatima, Zhao, Xueheng, Setchell, Kenneth D.R., Sharma, Yash, Fernandes, Phillip, Srivastava, Sanjana, Shrivastava, Aman, Ehsan, Lubaina, Jain, Varun, Raghavan, Shyam, Moskaluk, Christopher, Haberman, Yael, Denson, Lee A., Mehta, Khyati, Iqbal, Najeeha T., Rahman, Najeeb, Sadiq, Kamran, Ahmad, Zubair, Idress, Romana, Iqbal, Junaid, Ahmed, Sheraz, Hotwani, Aneeta, Umrani, Fayyaz, Amadi, Beatrice, Kelly, Paul, Brown, Donald E., Moore, Sean R., Ali, Syed Asad, Syed, Sana

“…Environmental enteric dysfunction (EED) is a subclinical enteropathy challenging to diagnose due to an overlap of tissue features with other inflammatory…”
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Prediction of response to anti-TNFα using integrative computational approaches in Crohn’s disease—Needle in a haystack or a promising biomarker? by Zulqarnain, Fatima, Syed, Sana

“…In the January issue of Cell Reports Medicine, Gerassy-Vainberg et al.1 demonstrate the utility of integrative methods to reveal molecular mechanisms…”
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Machine and deep learning in inflammatory bowel disease by Zulqarnain, Fatima, Rhoads, S. Fisher, Syed, Sana

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Machine and deep learning in inflammatory bowel disease by Zulqarnain, Fatima, Rhoads, S. Fisher, Syed, Sana

“…The Management of inflammatory bowel disease (IBD) has evolved with the introduction and widespread adoption of biologic agents; however, the advent of…”
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Tu2007 WHAT IS NORMAL? CHARACTERIZATION OF VARIATIONS IN CONTROL DUODENAL BIOPSIES BY MACHINE LEARNING IMAGE ANALYSIS by Sessions, Julia, Zulqarnain, Fatima, Jain, Varun, Srivastava, Sanjana, Rhoads, Fisher, Syed, Sana

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956 WHAT IS NORMAL? CHARACTERIZATION OF CONTROL PEDIATRIC DUODENAL BIOPSIES USING CLINICAL DATA, MACHINE LEARNING IMAGE ANALYSIS, AND TRANSCRIPTOMICS by Sessions, Julia, Rhoads, Fisher, Srivastava, Sanjana, Zulqarnain, Fatima, Jain, Varun, Raghavan, Shyam, Marie, Chelsea, Petri, William A., Syed, Sana

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Sa2051 THE DEVELOPMENT OF AN ILEUM-SPECIFIC METABOLIC NETWORK MODEL, ILEUM1: A VALUABLE TOOL FOR ANALYZING METABOLIC CHANGES IN PEDIATRIC CROHN'S DISEASE by Moore, Connor, Batavia, Mariska, Shao, Will, Zulqarnain, Fatima, Greene, Adam R., Fernandez, Facundo, Matthews, Jason, Kugathasan, Subra, Syed, Sana, Papin, Jason

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1092: HISTOPATHOLOGIC IMAGE ANALYSIS CAN PREDICT ANTI-TNF RESPONSE IN PEDIATRIC CROHN'S DISEASE PATIENTS USING MACHINE LEARNING MODELS by May, Eve, Sali, Rasoul, Fernandes, Philip, Zulqarnain, Fatima, Javaid, Aamir, Mani, Haresh, Hourigan, Suchitra K., Moskaluk, Christopher A., Raghavan, Shyam S., Brown, Donald, Syed, Sana

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Challenges in IBD Research 2024: Precision Medicine by Syed, Sana, Boland, Brigid S, Bourke, Lauren T, Chen, Lea Ann, Churchill, Laurie, Dobes, Angela, Greene, Adam, Heller, Caren, Jayson, Christina, Kostiuk, Benjamin, Moss, Alan, Najdawi, Fedaa, Plung, Lori, Rioux, John D, Rosen, Michael J, Torres, Joana, Zulqarnain, Fatima, Satsangi, Jack

“…Precision medicine is part of 5 focus areas of the Challenges in IBD Research 2024 research document, which also includes preclinical human IBD mechanisms,…”
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Quantitative Morphometry and Machine Learning Model to Explore Duodenal and Rectal Mucosal Tissue of Children with Environmental Enteric Dysfunction by Khan, Marium, Jamil, Zehra, Ehsan, Lubaina, Zulqarnain, Fatima, Srivastava, Sanjana, Siddiqui, Saman, Fernandes, Philip, Raghib, Muhammad, Sengupta, Saurav, Mujahid, Zia, Ahmed, Zubair, Idrees, Romana, Ahmed, Sheraz, Umrani, Fayaz, Iqbal, Najeeha, Moskaluk, Christopher, Raghavan, Shyam, Cheng, Lin, Moore, Sean, Ali, Syed Asad, Iqbal, Junaid, Syed, Sana

“…Environmental enteric dysfunction (EED) is a subclinical enteropathy prevalent in resource-limited settings, hypothesized to be a consequence of chronic…”
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Association of Anti-Rotavirus IgA Seroconversion with Growth, Environmental Enteric Dysfunction and Enteropathogens in Rural Pakistani Infants by Ahmed, Sheraz, Iqbal, Junaid, Sadiq, Kamran, Umrani, Fayaz, Rizvi, Arjumand, Kabir, Furqan, Jamil, Zehra, Syed, Sana, Ehsan, Lubaina, Zulqarnain, Fatima, Sajid, Muhammed, Hotwani, Aneeta, Rahman, Najeeb, Ma, Jennie Z., McNeal, Monica, Ann Costa Clemens, Sue, Talat Iqbal, Najeeha, Moore, Sean R., Ali, Asad

“…The underperformance of oral vaccines in children of low- and middle-income countries is partly attributable to underlying environmental enteric dysfunction…”
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Distance from Healthcare Facilities Is Associated with Increased Morbidity of Acute Infection in Pediatric Patients in Matiari, Pakistan by Corden, Elise, Siddiqui, Saman Hasan, Sharma, Yash, Raghib, Muhammad Faraz, Adorno, 3rd, William, Zulqarnain, Fatima, Ehsan, Lubaina, Shrivastava, Aman, Ahmed, Sheraz, Umrani, Fayaz, Rahman, Najeeb, Ali, Rafey, Iqbal, Najeeha T, Moore, Sean R, Ali, Syed Asad, Syed, Sana

“…The relationship between environmental factors and child health is not well understood in rural Pakistan. This study characterized the environmental factors…”
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Image-Level Uncertainty in Pseudo-Label Selection for Semi-Supervised Segmentation by McBee, Payden, Zulqarnain, Fatima, Syed, Sana, Brown, Donald E.

“…Advancements in deep learning techniques have proved useful in biomedical image segmentation. However, the large amount of unlabeled data inherent in…”
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Deep Learning for Predicting Pediatric Crohn's Disease Using Histopathological Imaging by Sharma, Anahita H., Lawlor, Burke W., Wang, Jason Y., Sharma, Yash, Sengupta, Saurav, Fernandes, Philip, Zulqarnain, Fatima, May, Eve, Syed, Sana, Brown, Donald E.

“…The current gold standard for Crohn's disease diagnosis involves the examination of biopsied tissue by a trained physician. However, endoscopic images and…”
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