Search Results - "Zubova, Elena A."
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Monoclinic Phase and Competition Between Transformation Modes in the Phase Transition Between Orthorhombic and Triclinic Phases of Crystalline Polyethylene
Published in Macromolecular research (01-12-2021)“…We describe the results of the molecular dynamics (MD) simulation 1 of shear-induced martensitic phase transition between the orthorhombic and triclinic phases…”
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2
Kinetics of the Conformational Transformation between B- and A‑Forms in the Drew–Dickerson Dodecamer
Published in ACS omega (29-12-2020)“…Some DNA sequences in crystals and in complexes with proteins can exist in the forms intermediate between the B- and A-DNA. Based on this, it was implied that…”
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3
Variability of the DNA Backbone Geometry in DNA–Protein Complexes: Experimental Data Analysis
Published in Journal of chemical information and modeling (27-09-2021)“…We have analyzed and compared the available experimental data (PDB) on the backbone geometry of the DNA in solution (NMR), in crystals (X-rays), and in…”
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4
Experimental detection of conformational transitions between forms of DNA: problems and prospects
Published in Biophysical reviews (01-10-2023)“…Under different conditions, the DNA double helix can take different geometric forms. Of the large number of its conformations, in addition to the “canonical” B…”
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C–B–A Test of DNA Force Fields
Published in ACS omega (21-03-2023)“…The DNA duplex may be locally strongly bent in complexes with proteins, for example, with polymerases or in a nucleosome. At such bends, the DNA helix is…”
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Assessing the effects of the modular approach in math learning on independent creativity of university students
Published in Revista Tempos e Espaços em Educação (Online) (01-01-2021)“…Numerous teachers and researchers are studying the issue of improving the effectiveness of university education and offer innovative technologies to address…”
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Dynamics of Soliton-Like Excitations in a Chain of a Polymer Crystal: Influence of Neighbouring Chains Mobility
Published in Journal of nonlinear mathematical physics (01-01-2001)“…We investigate influence of mobility of neighbouring chains on dynamics of soliton-like excitations in a chain of the simplest polymer crystal (polyethylene in…”
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8
C-A test of DNA force fields
Published 19-11-2022“…The DNA duplex may be locally strongly bent in complexes with proteins, for example, with polymerases or in a nucleosome. At such bends, the DNA helix is…”
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Shear induced martensitic transformations in crystalline polyethylene: direct MD simulation
Published 29-03-2019“…Phys. Rev. B 99, 134104 (2019) For the first time, we carry out molecular dynamics (MD) simulation of shear-induced martensitic phase transitions between the…”
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10
The "sugar" coarse-grained DNA model
Published 13-01-2014“…More than twenty coarse-grained (CG) DNA models have been developed for simulating the behavior of this molecule under various conditions, including those…”
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The simplest model of polymer crystal exhibiting polymorphism
Published 05-09-2011“…Almost all the polymer crystals have several polymorphic modifications. Their structure and existence conditions, as well as transitions between them are not…”
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