Search Results - "Zoi, I."

Proteome-Wide Detection and Annotation of Receptor Tyrosine Kinases (RTKs): RTK-PRED and the TyReK Database by Filis, Georgios, Baltoumas, Fotis A, Spanogiannis, Georgios, Litou, Zoi I, Iconomidou, Vassiliki A

“…Receptor tyrosine kinases (RTKs) form a highly important group of protein receptors of the eukaryotic cell membrane. They control many vital cellular functions…”
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CW-PRED: Prediction of C-terminal surface anchoring sorting signals in bacteria and Archaea by Chatziargyri, Aikaterini G, Stasi, Evangelia A, Tsirigos, Konstantinos I, Litou, Zoi I, Iconomidou, Vassiliki A, Bagos, Pantelis G

“…Sorting signals are crucial for the anchoring of proteins to the cell surface in archaea and bacteria. These proteins often feature distinct motifs at their…”
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Dual targeting of RANKL/RANK pathway and HER-2 as a novel treatment strategy in HER-2 positive (+) breast carcinomas (BC) by Zoi, I., Xingi, E., Thomaidou, D., Papavassiliou, A.G., Karamouzis, M.V.

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Deep-proteome mapping of WM-266-4 human metastatic melanoma cells: From oncogenic addiction to druggable targets by Konstantakou, Eumorphia G, Velentzas, Athanassios D, Anagnostopoulos, Athanasios K, Litou, Zoi I, Konstandi, Ourania A, Giannopoulou, Aikaterini F, Anastasiadou, Ema, Voutsinas, Gerassimos E, Tsangaris, George Th, Stravopodis, Dimitrios J

“…Cutaneous melanoma is a malignant tumor of skin melanocytes that are pigment-producing cells located in the basal layer (stratum basale) of epidermis…”
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NucEnvDB: A Database of Nuclear Envelope Proteins and Their Interactions by Baltoumas, Fotis A, Sofras, Dimitrios, Apostolakou, Avgi E, Litou, Zoi I, Iconomidou, Vassiliki A

“…The nuclear envelope (NE) is a double-membrane system surrounding the nucleus of eukaryotic cells. A large number of proteins are localized in the NE,…”
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Analysis of Single-Nucleotide Polymorphisms in Human Voltage-Gated Ion Channels by Nastou, Katerina C, Batskinis, Michail A, Litou, Zoi I, Hamodrakas, Stavros J, Iconomidou, Vassiliki A

“…Voltage-gated ion channels (VGICs) are one of the largest groups of transmembrane proteins. Due to their major role in the generation and propagation of…”
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JUCHMME: a Java Utility for Class Hidden Markov Models and Extensions for biological sequence analysis by Tamposis, Ioannis A, Tsirigos, Konstantinos D, Theodoropoulou, Margarita C, Kontou, Panagiota I, Tsaousis, Georgios N, Sarantopoulou, Dimitra, Litou, Zoi I, Bagos, Pantelis G

“…JUCHMME is an open-source software package designed to fit arbitrary custom Hidden Markov Models (HMMs) with a discrete alphabet of symbols. We incorporate a…”
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AmyCo: the amyloidoses collection by Nastou, Katerina C., Nasi, Georgia I., Tsiolaki, Paraskevi L., Litou, Zoi I., Iconomidou, Vassiliki A.

“…Amyloid fibrils are formed when soluble proteins misfold into highly ordered insoluble fibrillar aggregates and affect various organs and tissues. The…”
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Effective mussel-farming governance in Greece: Testing the guidelines through models, to evaluate sustainable management alternatives by Konstantinou, Zoi I., Kombiadou, Katerina, Krestenitis, Yannis N.

“…The last twenty five years multiple management issues concerning the suspended farming of filter feeding bivalves in Greece have emerged from the deficient…”
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Aspects of Mussel-Farming Activity in Chalastra, Thermaikos Gulf, Greece: An Effort to Untie a Management Gordian Knot by Konstantinou, Zoi I., Krestenitis, Yannis N., Latinopoulos, Dionysis, Pagou, Kalliopi, Galinou-Mitsoudi, Sofia, Savvidis, Yiannis

“…Small-scale mussel farming in the coastal area of Chalastra (Thermaikos Gulf, Greece) has faced major problems during the last decade due to environmental…”
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The Human Plasma Membrane Peripherome : Visualization and Analysis of Interactions by Litou, Zoi I., Tsaousis, Georgios N., Kremizas, Kimon E., Hamodrakas, Stavros J., Nastou, Katerina C.

“…A major part of membrane function is conducted by proteins, both integral and peripheral. Peripheral membrane proteins temporarily adhere to biological…”
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PredSL： A Tool for the N-terminal Sequence-based Prediction of Protein Subcellular Localization by Petsalaki, Evangelia I., Bagos, Pantelis G., Litou, Zoi I., Hamodrakas, Stavros J.

“…The ability to predict the subcellular localization of a protein from its sequence is of great importance, as it provides information about the protein＇s…”
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Pleural effusion cytology due to malignancy. A combined cytomorphological–immunocytochemical study of 500 cases by Kalogeraki, A, Tamiolakis, D, Datseri, G, Lazopoulos, G, Karvelas-Kalogerakis, M, Segredakis, J, Zoi, I

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Estimation of Membrane Proteins in the Human Proteome by Ahram, Mamoun, Litou, Zoi I., Fang, Ruihua, Al-Tawallbeh, Ghaith

“…Genomics and proteomics have added valuable information to our knowledgebase of the human biological system including the discovery of therapeutic targets and…”
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Rethinking suspended mussel-farming modelling: Combining hydrodynamic and bio-economic models to support integrated aquaculture management by Konstantinou, Zoi I., Kombiadou, Katerina

“…Suspended mussel-farming using cultivation socks, either in long-line or traditional pole cultivation structures, is a widely spread activity around the world…”
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Prediction of cell wall sorting signals in gram-positive bacteria with a hidden markov model: application to complete genomes by Litou, Zoi I, Bagos, Pantelis G, Tsirigos, Konstantinos D, Liakopoulos, Theodore D, Hamodrakas, Stavros J

“…Surface proteins in Gram-positive bacteria are frequently implicated in virulence. We have focused on a group of extracellular cell wall-attached proteins…”
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N-terminal sequence-based prediction of subcellular location by Petsalakis, Evangelia I, Bagos, Pantelis G, Litou, Zoi I, Hamodrakas, Stavros J

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P10.23.B Polycystin-1 induces mechanotransduction pathways in gioblastoma cells under hydrostatic pressure by Zoi, I, Gargalionis, A, Papavassiliou, K, Nasiri-Ansari, N, Piperi, C, Basdra, E, Papavassiliou, A

“…Abstract Background Increased mechanical load and stiffness of the tumor microenvironment are key features during progression of gliomas. Polycystin-1 (PC1) is…”
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waveTM: Wavelet-Based Transmembrane Segment Prediction by Pashou, Evanthia E., Litou, Zoi I., Liakopoulos, Theodore D., Hamodrakas, Stavros J.

“…waveTM is a web tool for the prediction of transmembrane segments in α-helical membrane proteins. Prediction is performed by a dynamic programming algorithm on…”
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Position resolution with 25µm pitch pixel sensors before and after irradiation by Zoi, I., Ebrahimi, A., Feindt, F., Garutti, E., Gunnellini, P., Hinzmann, A., Niemeyer, C., Pitzl, D., Schwandt, J., Steinbrück, G.

“…Pixelated silicon detectors are state-of-the-art technology to achieve precise tracking and vertexing at collider experiments, designed to accurately measure…”
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